PMID: 10958763

Rivera A, White K, Stohr H, Steiner K, Hemmrich N, Grimm T, Jurklies B, Lorenz B, Scholl HP, Apfelstedt-Sylla E, Weber BH
A comprehensive survey of sequence variation in the ABCA4 (ABCR) gene in Stargardt disease and age-related macular degeneration.
Am J Hum Genet. 2000 Oct;67(4):800-13. Epub 2000 Aug 24., [PubMed]
Sentences
No. Mutations Sentence Comment
7 ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:7:112
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:7:106
status: NEW
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Eight different alleles account for 61% of the identified disease alleles, and at least one of these, the L541P-A1038V complex allele, appears to be a founder mutation in the German population. Login to comment
22 ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:22:55
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:22:43
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Gly863Ala
X
ABCA4 p.Gly863Ala 10958763:22:36
status: NEW
view ABCA4 p.Gly863Ala details
Certain mutant alleles-for example, G863A, A1038V, and G1961E-appear to be more common and may have altered frequencies in different populations, as a result of founder effect (Maugeri et al. 1999; Simonelli et al. 2000). Login to comment
79 ABCA4 p.Asn1868Ile
X
ABCA4 p.Asn1868Ile 10958763:79:246
status: NEW
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ABCA4 p.Arg152Gln
X
ABCA4 p.Arg152Gln 10958763:79:239
status: NEW
view ABCA4 p.Arg152Gln details
ABCA4 p.Ala60Thr
X
ABCA4 p.Ala60Thr 10958763:79:109
status: NEW
view ABCA4 p.Ala60Thr details
ABCA4 p.Ala60Glu
X
ABCA4 p.Ala60Glu 10958763:79:118
status: NEW
view ABCA4 p.Ala60Glu details
ABCA4 p.Val1921Met
X
ABCA4 p.Val1921Met 10958763:79:258
status: NEW
view ABCA4 p.Val1921Met details
Also considered pathological were missense mutations causing nonconservative amino acid changes-for example, A60T and A60E (table 2)-with the exception of those that were found at similar frequencies in the three study groups-for example, R152Q, N1868I, and V1921M (tables 3 and 4). Login to comment
80 ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:80:3144
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:80:1673
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Arg212Cys
X
ABCA4 p.Arg212Cys 10958763:80:454
status: NEW
view ABCA4 p.Arg212Cys details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:80:781
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Gly1977Ser
X
ABCA4 p.Gly1977Ser 10958763:80:3331
status: NEW
view ABCA4 p.Gly1977Ser details
ABCA4 p.Arg1300*
X
ABCA4 p.Arg1300* 10958763:80:2203
status: NEW
view ABCA4 p.Arg1300* details
ABCA4 p.Tyr362*
X
ABCA4 p.Tyr362* 10958763:80:667
status: NEW
view ABCA4 p.Tyr362* details
ABCA4 p.Arg653Cys
X
ABCA4 p.Arg653Cys 10958763:80:1075
status: NEW
view ABCA4 p.Arg653Cys details
ABCA4 p.Arg1443His
X
ABCA4 p.Arg1443His 10958763:80:2464
status: NEW
view ABCA4 p.Arg1443His details
ABCA4 p.Arg681*
X
ABCA4 p.Arg681* 10958763:80:1137
status: NEW
view ABCA4 p.Arg681* details
ABCA4 p.Trp855*
X
ABCA4 p.Trp855* 10958763:80:1288
status: NEW
view ABCA4 p.Trp855* details
ABCA4 p.Arg1108Cys
X
ABCA4 p.Arg1108Cys 10958763:80:2034
status: NEW
view ABCA4 p.Arg1108Cys details
ABCA4 p.Pro1380Leu
X
ABCA4 p.Pro1380Leu 10958763:80:2280
status: NEW
view ABCA4 p.Pro1380Leu details
ABCA4 p.Pro1486Leu
X
ABCA4 p.Pro1486Leu 10958763:80:2500
status: NEW
view ABCA4 p.Pro1486Leu details
ABCA4 p.Arg152*
X
ABCA4 p.Arg152* 10958763:80:421
status: NEW
view ABCA4 p.Arg152* details
ABCA4 p.Thr901Ala
X
ABCA4 p.Thr901Ala 10958763:80:1482
status: NEW
view ABCA4 p.Thr901Ala details
ABCA4 p.Arg1898His
X
ABCA4 p.Arg1898His 10958763:80:2976
status: NEW
view ABCA4 p.Arg1898His details
ABCA4 p.Trp663*
X
ABCA4 p.Trp663* 10958763:80:1106
status: NEW
view ABCA4 p.Trp663* details
ABCA4 p.Thr959Ile
X
ABCA4 p.Thr959Ile 10958763:80:1548
status: NEW
view ABCA4 p.Thr959Ile details
ABCA4 p.Arg2077Trp
X
ABCA4 p.Arg2077Trp 10958763:80:3429
status: NEW
view ABCA4 p.Arg2077Trp details
ABCA4 p.Glu471Lys
X
ABCA4 p.Glu471Lys 10958763:80:737
status: NEW
view ABCA4 p.Glu471Lys details
ABCA4 p.Pro68Leu
X
ABCA4 p.Pro68Leu 10958763:80:324
status: NEW
view ABCA4 p.Pro68Leu details
ABCA4 p.Gly65Glu
X
ABCA4 p.Gly65Glu 10958763:80:284
status: NEW
view ABCA4 p.Gly65Glu details
ABCA4 p.Gln1412*
X
ABCA4 p.Gln1412* 10958763:80:2353
status: NEW
view ABCA4 p.Gln1412* details
ABCA4 p.Gly1975Arg
X
ABCA4 p.Gly1975Arg 10958763:80:3299
status: NEW
view ABCA4 p.Gly1975Arg details
ABCA4 p.Glu1399Lys
X
ABCA4 p.Glu1399Lys 10958763:80:2321
status: NEW
view ABCA4 p.Glu1399Lys details
ABCA4 p.Gln1750*
X
ABCA4 p.Gln1750* 10958763:80:2831
status: NEW
view ABCA4 p.Gln1750* details
ABCA4 p.Ser1689Pro
X
ABCA4 p.Ser1689Pro 10958763:80:2658
status: NEW
view ABCA4 p.Ser1689Pro details
ABCA4 p.Cys1488Tyr
X
ABCA4 p.Cys1488Tyr 10958763:80:2541
status: NEW
view ABCA4 p.Cys1488Tyr details
ABCA4 p.Arg572Gln
X
ABCA4 p.Arg572Gln 10958763:80:891
status: NEW
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ABCA4 p.Cys230Ser
X
ABCA4 p.Cys230Ser 10958763:80:493
status: NEW
view ABCA4 p.Cys230Ser details
ABCA4 p.Gly607Arg
X
ABCA4 p.Gly607Arg 10958763:80:936
status: NEW
view ABCA4 p.Gly607Arg details
ABCA4 p.Tyr2203*
X
ABCA4 p.Tyr2203* 10958763:80:3523
status: NEW
view ABCA4 p.Tyr2203* details
ABCA4 p.Ser765Arg
X
ABCA4 p.Ser765Arg 10958763:80:1252
status: NEW
view ABCA4 p.Ser765Arg details
ABCA4 p.Arg1097Cys
X
ABCA4 p.Arg1097Cys 10958763:80:2002
status: NEW
view ABCA4 p.Arg1097Cys details
ABCA4 p.Cys764Tyr
X
ABCA4 p.Cys764Tyr 10958763:80:1183
status: NEW
view ABCA4 p.Cys764Tyr details
ABCA4 p.Ser1063Pro
X
ABCA4 p.Ser1063Pro 10958763:80:1834
status: NEW
view ABCA4 p.Ser1063Pro details
ABCA4 p.Gly1748Arg
X
ABCA4 p.Gly1748Arg 10958763:80:2799
status: NEW
view ABCA4 p.Gly1748Arg details
ABCA4 p.Gln635Lys
X
ABCA4 p.Gln635Lys 10958763:80:967
status: NEW
view ABCA4 p.Gln635Lys details
ABCA4 p.Phe1440Val
X
ABCA4 p.Phe1440Val 10958763:80:2432
status: NEW
view ABCA4 p.Phe1440Val details
ABCA4 p.Glu1885Lys
X
ABCA4 p.Glu1885Lys 10958763:80:2944
status: NEW
view ABCA4 p.Glu1885Lys details
ABCA4 p.Arg1705Leu
X
ABCA4 p.Arg1705Leu 10958763:80:2690
status: NEW
view ABCA4 p.Arg1705Leu details
ABCA4 p.Asn247Ser
X
ABCA4 p.Asn247Ser 10958763:80:560
status: NEW
view ABCA4 p.Asn247Ser details
ABCA4 p.Leu1763Pro
X
ABCA4 p.Leu1763Pro 10958763:80:2863
status: NEW
view ABCA4 p.Leu1763Pro details
ABCA4 p.Ala60Thr
X
ABCA4 p.Ala60Thr 10958763:80:226
status: NEW
view ABCA4 p.Ala60Thr details
ABCA4 p.Ala60Glu
X
ABCA4 p.Ala60Glu 10958763:80:255
status: NEW
view ABCA4 p.Ala60Glu details
ABCA4 p.Leu1430Pro
X
ABCA4 p.Leu1430Pro 10958763:80:2400
status: NEW
view ABCA4 p.Leu1430Pro details
ABCA4 p.Glu328Val
X
ABCA4 p.Glu328Val 10958763:80:635
status: NEW
view ABCA4 p.Glu328Val details
ABCA4 p.His914Ala
X
ABCA4 p.His914Ala 10958763:80:1513
status: NEW
view ABCA4 p.His914Ala details
ABCA4 p.Met1733Thr
X
ABCA4 p.Met1733Thr 10958763:80:2767
status: NEW
view ABCA4 p.Met1733Thr details
ABCA4 p.Gly72Arg
X
ABCA4 p.Gly72Arg 10958763:80:353
status: NEW
view ABCA4 p.Gly72Arg details
ABCA4 p.Gln635*
X
ABCA4 p.Gln635* 10958763:80:999
status: NEW
view ABCA4 p.Gln635* details
ABCA4 p.Ala2216Val
X
ABCA4 p.Ala2216Val 10958763:80:3555
status: NEW
view ABCA4 p.Ala2216Val details
ABCA4 p.Glu1036Lys
X
ABCA4 p.Glu1036Lys 10958763:80:1628
status: NEW
view ABCA4 p.Glu1036Lys details
ABCA4 p.Glu1270*
X
ABCA4 p.Glu1270* 10958763:80:2167
status: NEW
view ABCA4 p.Glu1270* details
ABCA4 p.Thr1537Met
X
ABCA4 p.Thr1537Met 10958763:80:2577
status: NEW
view ABCA4 p.Thr1537Met details
ABCA4 p.Arg2077Gly
X
ABCA4 p.Arg2077Gly 10958763:80:3397
status: NEW
view ABCA4 p.Arg2077Gly details
Nucleotide alterations occurring in sim- Table 2 ABCA4 Mutations Found in Patients with STGD and AMD and in Controls EXON AND NUCLEOTIDE CHANGE EFFECT NO. OF ALLELES REFERENCE(S) STGD (288) AMD (400) Control (440) 3: 178GrA A60T 1 0 0 This study 179CrT A60E 1 0 0 This study 194GrA G65E 1 0 0 Fishman et al. (1999) 203CrT P68L 1 0 0 This study 214GrA G72R 1 0 0 This study 296insA Frameshift 2 0 0 This study 5: 454CrT R152X 1 0 0 This study 6: 634CrT R212C 1 0 0 Lewis et al. (1999) 688TrA C230S 1 0 0 This study 730delCT Frameshift 1 0 0 This study 740ArG N247S 1 0 0 This study 768GrT Splice 2 0 0 Maugeri et al. (1999) 8: 983ArT E328V 1a 0 0 This study 1086TrA Y362X 1 0 0 This study 10: 1317GrA W438X 1 0 0 This study 11: 1411GrA E471K 1 0 0 Lewis et al. (1999) 12: 1622TrC L541P 21a 1a 0 Rozet et al. (1998), Fishman et al. (1999), Lewis et al. (1999), Maugeri et al. (1999) 1715GrA R572Q 1a 0 0 Lewis et al. (1999) 13: 1819GrA G607R 1 0 0 This study 1903CrA Q635K 2a 0 0 This study 1903CrT Q635X 1 0 0 This study IVS13ϩ1GrA Splice 2 0 0 This study 14: 1957CrT R653C 1 0 0 This study 1988GrA W663X 1 0 0 This study 2041CrT R681X 4 0 0 Maugeri et al. (1999) 15: 2291GrA C764Y 1 0 0 This study 2292delT Frameshift 1a 0 0 This study 2295TrG S765R 1a 0 0 This study 16: 2564GrA W855X 1 0 0 Nasonkin et al. (1998) 17: 2588GrC Spliceb 17a 6 5 Allikmets et al. (1997a), Cremers et al. (1998), Lewis et al. (1999), Maugeri et al. (1999), Papaioannou et al. (2000) 18: 2701ArG T901A 0 2 0 This study 2741ArG H914A 0 0 1 This study 19: 2876CrT T959I 1 0 0 This study 20: IVS20ϩ5GrA Splice 1 0 0 This study 21: 3106GrA E1036K 1a 0 0 Nasonkin et al. (1998) 3113CrT A1038V 26a 4a 1 Allikmets et al. (1997a), Cremers et al. (1998), Rozet et al. (1998), Fishman et al. (1999), Lewis et al. (1999), Maugeri et al. (1999) T3187TrC S1063P 1 0 0 This study (Continued) 805 Table 2 Continued EXON AND NUCLEOTIDE CHANGE EFFECT NO. OF ALLELES REFERENCE(S) STGD (288) AMD (400) Control (440) 22: 3292CrT R1097C 1 0 0 This study 3322CrT R1108C 4 0 0 Rozet et al. (1998), Fishman et al. (1999), Lewis et al. (1999) 24: 3528insTGCA Frameshift 1 0 0 This study 25: 3808GrT E1270X 1 0 0 This study 27: 3898CrT R1300X 1 0 0 This study 28: IVS28ϩ5GrA Splice 1 0 0 This study 4139CrT P1380L 1 0 0 Lewis et al. (1999) 4195GrA E1399K 2 0 0 This study 4234CrT Q1412X 4 0 0 Maugeri et al. (1999) 29: 4289TrC L1430P 2 0 0 This study 4318TrG F1440V 1 0 0 This study 4328GrA R1443H 1 0 0 This study 30: 4457CrT P1486L 1 0 0 Lewis et al. (1999) 4463GrA C1488Y 1 0 0 This study 31: 4610CrT T1537M 1 0 0 This study 35: IVS35ϩ2TrA Splice 1 0 0 This study 36: 5065TrC S1689P 1 0 0 This study 5114GrT R1705L 1 0 0 This study IVS36ϩ1GrA Splice 1 0 0 This study 37: 5198TrC M1733T 0 0 1 This study 5242GrA G1748R 1 0 0 This study 5248CrT Q1750X 1 0 0 This study 5288TrC L1763P 1 0 0 This study 38: IVS38ϩ1GrA Splice 1 0 0 This study 40: 5653GrA E1885K 1 0 0 This study 5693GrA R1898H 5 2 1 Allikmets et al. (1997b), Lewis et al. (1999) IVS40ϩ5GrA Splice 8a 0 0 Cremers et al. (1998), Lewis et al. (1999), Maugeri et al. (1999) 42: 5882GrA G1961E 34 4 2 Allikmets et al. (1997b), Fishman et al. (1999), Lewis et al. (1999), Maugeri et al. (1999) 43: 5917delG Frameshift 3 0 0 This study 5923GrC G1975R 1 0 0 This study 5929GrA G1977S 1 0 0 Rozet et al. (1998), Lewis et al. (1999) 45: 6229CrG R2077G 1 0 0 This study 6229CrT R2077W 1 0 0 Allikmets et al. (1997a), Fishman et al. (1999), Lewis et al. (1999) 48: 6609CrA Y2203X 2 0 0 This study 6647GrT A2216V 0 0 1 This study a Mutation pairs occurring on a single haplotype. Login to comment
81 ABCA4 p.Gly863Ala
X
ABCA4 p.Gly863Ala 10958763:81:31
status: NEW
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b Effect is missense mutation (G863A) and in-frame deletion (delG863), according to Maugeri et al. (1999). Login to comment
82 ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:82:1775
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Asp2177Asn
X
ABCA4 p.Asp2177Asn 10958763:82:1682
status: NEW
view ABCA4 p.Asp2177Asn details
ABCA4 p.Leu1970Phe
X
ABCA4 p.Leu1970Phe 10958763:82:1239
status: NEW
view ABCA4 p.Leu1970Phe details
ABCA4 p.Ile1562Thr
X
ABCA4 p.Ile1562Thr 10958763:82:1022
status: NEW
view ABCA4 p.Ile1562Thr details
ABCA4 p.Glu1087Asp
X
ABCA4 p.Glu1087Asp 10958763:82:461
status: NEW
view ABCA4 p.Glu1087Asp details
ABCA4 p.Val552Ile
X
ABCA4 p.Val552Ile 10958763:82:236
status: NEW
view ABCA4 p.Val552Ile details
ABCA4 p.Arg152Gln
X
ABCA4 p.Arg152Gln 10958763:82:156
status: NEW
view ABCA4 p.Arg152Gln details
ABCA4 p.Gly2059Ala
X
ABCA4 p.Gly2059Ala 10958763:82:1447
status: NEW
view ABCA4 p.Gly2059Ala details
ABCA4 p.Leu2241Val
X
ABCA4 p.Leu2241Val 10958763:82:1728
status: NEW
view ABCA4 p.Leu2241Val details
ABCA4 p.Val1921Met
X
ABCA4 p.Val1921Met 10958763:82:1203
status: NEW
view ABCA4 p.Val1921Met details
Table 3 Rare Sequence Variants in the ABCA4 Gene EXON AND NUCLEOTIDE CHANGE EFFECT NO. OF ALLELES REFERENCE(S) STGD (288) AMD (400) Control (440) 5: 455GrA R152Q 3 1 3 This study 8: IVS8ϩ38ArT Unknown 0 1 0 This study 12: 1654GrA V552I 0 0 2 This study IVS11-6CrG Unknown 0 4 2 This study 13: 1932CrT D644D 2 0 0 This study 17: IVS16-12CrG Unknown 0 0 8 This study 18: IVS17-56CrG Unknown 3 0 0 This study IVS17-36CrT Unknown 0 2 1 This study 22: 3261ArC E1087D 1 0 0 This study 3264CrT P1088P 0 0 1 This study IVS21-20CrT Unknown 1 0 0 This study 23: IVS23ϩ10TrG Unknown 1 0 0 This study IVS23ϩ17GrC Unknown 1 0 0 This study 24: IVS23-28TrC Unknown 2 4 1 This study 25: 3759GrA T1253T 1 0 0 This study 28: 4140GrA P1380P 2 0 0 This study IVS28ϩ43GrA Unknown 4 3 1 This study 29: IVS29ϩ13GrA Unknown 0 1 0 This study IVS29ϩ32ArG Unknown 1 0 0 This study 31: 4578GrA T1526T 0 1 0 This study 32: IVS32ϩ45TrC Unknown 1 0 0 This study 33: IVS32-57TrG Unknown 0 0 1 This study 4685TrC I1562T 0 0 6 Allikmets et al. (1997b) 36: IVS36ϩ20GrA Unknown 1 0 0 This study 39: 5487GrT L1829L 0 0 1 This study IVS38-10TrC Unknown 9 0 0 Maugeri et al. (1999) 41: 5761GrA V1921M 1 1 1 This study 43: 5908CrT L1970F 1 0 1 Allikmets et al. (1997b), Rozet et al. (1998), Lewis et al. (1999) IVS43ϩ7ArC Unknown 1 0 0 This study 44: 6027CrT I2023I 1 0 0 Allikmets et al. (1997a), Nasonkin et al. (1998) 45: 6176GrC G2059A 0 0 1 This study 46: IVS46ϩ27GrA Unknown 0 0 1 This study 47: IVS46-46TrA Unknown 1 0 0 This study 48: IVS48ϩ21CrT Unknown 18a 2a 0 Allikmets et al. (1997b), Nasonkin et al. (1998), Papaioannou et al. (2000) 6529GrA D2177N 2 3 4 Allikmets et al. (1997b) 6721CrG L2241V 1 0 0 This study a Occurs together with G1961E in 17/18 and 2/2 instances. Login to comment
83 ABCA4 p.Arg212His
X
ABCA4 p.Arg212His 10958763:83:159
status: NEW
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ABCA4 p.Asn1868Ile
X
ABCA4 p.Asn1868Ile 10958763:83:609
status: NEW
view ABCA4 p.Asn1868Ile details
ABCA4 p.Pro1948Leu
X
ABCA4 p.Pro1948Leu 10958763:83:897
status: NEW
view ABCA4 p.Pro1948Leu details
ABCA4 p.Arg943Gln
X
ABCA4 p.Arg943Gln 10958763:83:363
status: NEW
view ABCA4 p.Arg943Gln details
ABCA4 p.His423Arg
X
ABCA4 p.His423Arg 10958763:83:239
status: NEW
view ABCA4 p.His423Arg details
Table 4 Polymorphisms in the ABCA4 Gene EXON AND NUCLEOTIDE CHANGE EFFECT NO. OF ALLELES REFERENCE(S) STGD (n p 288) AMD (n p 400) Control (n p 440) 6: 635GrA R212H 8 8 32 This study 7: IVS6-32TrC Unknown 53 115 130 This study 10: 1267ArG H423R 52 79 101 This study 1268CrT H423H 11 17 17 This study 14: IVS14ϩ50TrCa Unknown 22 18 9 This study 19: 2828GrAa R943Q 23 14 10 Allikmets et al. (1997a, 1997b), Maugeri et al. (1999), Papaioannou et al. (2000) 28: 4203CrA P1401P 29 13 20 Maugeri et al. (1999) 33: IVS32-38CrT Unknown 1 4 12 This study 34: IVS33-16delGT Unknown 24 8 12 This study 40: 5603ArT N1868I 37 40 46 Maugeri et al. (1999) 5682GrC L1894L 73 52 91 Maugeri et al. (1999), Papaioannou et al. (2000) 41: 5814ArG L1938L 50 68 70 This study 42: IVS41-11GrA Unknown 46 56 55 Maugeri et al. (1999) 5844ArG P1948P 40 40 39 Maugeri et al. (1999), Papaioannou et al. (2000) 5843CArTG P1948L 5 14 13 Maugeri et al. (1999) 44: IVS43-16GrA Unknown 46 48 55 Papaioannou et al. (2000) 45: IVS45ϩ7GrA Unknown 10 15 11 Papaioannou et al. (2000) 6249CrT I2083I 13 17 27 Allikmets et al. (1997a), Maugeri et al. (1999) 46: 6285TrC D2095D 38 36 33 Maugeri et al. (1999) a 2828GrA and IVS14ϩ50TrC occur on the same haplotype together with 2588GrC. Login to comment
90 ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:90:101
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:90:91
status: NEW
view ABCA4 p.Leu541Pro details
In the group with AMD, 400 chromosomes were studied and 19 mutations were identified, with L541P and A1038V occurring on a single haplotype in one patient (AMD43). Login to comment
100 ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:100:52
status: NEW
view ABCA4 p.Gly1961Glu details
because of linkage disequilibrium with the mutation G1961E (data not shown). Login to comment
101 ABCA4 p.Arg212His
X
ABCA4 p.Arg212His 10958763:101:183
status: NEW
view ABCA4 p.Arg212His details
ABCA4 p.Asn1868Ile
X
ABCA4 p.Asn1868Ile 10958763:101:204
status: NEW
view ABCA4 p.Asn1868Ile details
ABCA4 p.Pro1948Leu
X
ABCA4 p.Pro1948Leu 10958763:101:216
status: NEW
view ABCA4 p.Pro1948Leu details
ABCA4 p.Arg943Gln
X
ABCA4 p.Arg943Gln 10958763:101:197
status: NEW
view ABCA4 p.Arg943Gln details
ABCA4 p.His423Arg
X
ABCA4 p.His423Arg 10958763:101:190
status: NEW
view ABCA4 p.His423Arg details
Nineteen different alterations were present in 11% of the control alleles and were classified as polymorphisms (table 4); these include five nonconservative amino acid substitutions (R212H, H423R, R943Q, N1868I, and P1948L). Login to comment
111 ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:252
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:269
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:276
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:307
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:892
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:949
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:985
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1185
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1211
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1284
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1332
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1432
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1464
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1496
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1521
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1556
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1588
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1624
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1744
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1765
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1815
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1840
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:111:1921
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:300
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:332
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:409
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:542
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:555
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:621
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:679
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:942
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:1009
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:1356
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:1363
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:1387
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:1457
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:1489
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:1581
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:1649
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:1737
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:1864
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:111:1996
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Arg212Cys
X
ABCA4 p.Arg212Cys 10958763:111:730
status: NEW
view ABCA4 p.Arg212Cys details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:294
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:326
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:403
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:536
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:549
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:673
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:936
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:1003
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:1350
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:1381
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:1451
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:1483
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:1575
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:1731
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:1858
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:111:1990
status: NEW
view ABCA4 p.Leu541Pro details
ABCA4 p.Gly1977Ser
X
ABCA4 p.Gly1977Ser 10958763:111:1070
status: NEW
view ABCA4 p.Gly1977Ser details
ABCA4 p.Arg1300*
X
ABCA4 p.Arg1300* 10958763:111:849
status: NEW
view ABCA4 p.Arg1300* details
ABCA4 p.Tyr362*
X
ABCA4 p.Tyr362* 10958763:111:368
status: NEW
view ABCA4 p.Tyr362* details
ABCA4 p.Arg1443His
X
ABCA4 p.Arg1443His 10958763:111:1016
status: NEW
view ABCA4 p.Arg1443His details
ABCA4 p.Arg681*
X
ABCA4 p.Arg681* 10958763:111:513
status: NEW
view ABCA4 p.Arg681* details
ABCA4 p.Arg681*
X
ABCA4 p.Arg681* 10958763:111:1278
status: NEW
view ABCA4 p.Arg681* details
ABCA4 p.Trp855*
X
ABCA4 p.Trp855* 10958763:111:416
status: NEW
view ABCA4 p.Trp855* details
ABCA4 p.Arg1108Cys
X
ABCA4 p.Arg1108Cys 10958763:111:885
status: NEW
view ABCA4 p.Arg1108Cys details
ABCA4 p.Arg1108Cys
X
ABCA4 p.Arg1108Cys 10958763:111:910
status: NEW
view ABCA4 p.Arg1108Cys details
ABCA4 p.Arg1898His
X
ABCA4 p.Arg1898His 10958763:111:519
status: NEW
view ABCA4 p.Arg1898His details
ABCA4 p.Arg1898His
X
ABCA4 p.Arg1898His 10958763:111:1088
status: NEW
view ABCA4 p.Arg1898His details
ABCA4 p.Arg1898His
X
ABCA4 p.Arg1898His 10958763:111:1307
status: NEW
view ABCA4 p.Arg1898His details
ABCA4 p.Trp663*
X
ABCA4 p.Trp663* 10958763:111:1515
status: NEW
view ABCA4 p.Trp663* details
ABCA4 p.Thr959Ile
X
ABCA4 p.Thr959Ile 10958763:111:736
status: NEW
view ABCA4 p.Thr959Ile details
ABCA4 p.Arg2077Trp
X
ABCA4 p.Arg2077Trp 10958763:111:229
status: NEW
view ABCA4 p.Arg2077Trp details
ABCA4 p.Glu471Lys
X
ABCA4 p.Glu471Lys 10958763:111:1809
status: NEW
view ABCA4 p.Glu471Lys details
ABCA4 p.Pro68Leu
X
ABCA4 p.Pro68Leu 10958763:111:1112
status: NEW
view ABCA4 p.Pro68Leu details
ABCA4 p.Gly65Glu
X
ABCA4 p.Gly65Glu 10958763:111:247
status: NEW
view ABCA4 p.Gly65Glu details
ABCA4 p.Gln1412*
X
ABCA4 p.Gln1412* 10958763:111:222
status: NEW
view ABCA4 p.Gln1412* details
ABCA4 p.Gln1412*
X
ABCA4 p.Gln1412* 10958763:111:917
status: NEW
view ABCA4 p.Gln1412* details
ABCA4 p.Gln1412*
X
ABCA4 p.Gln1412* 10958763:111:1675
status: NEW
view ABCA4 p.Gln1412* details
ABCA4 p.Gly1975Arg
X
ABCA4 p.Gly1975Arg 10958763:111:1095
status: NEW
view ABCA4 p.Gly1975Arg details
ABCA4 p.Glu1399Lys
X
ABCA4 p.Glu1399Lys 10958763:111:1063
status: NEW
view ABCA4 p.Glu1399Lys details
ABCA4 p.Glu1399Lys
X
ABCA4 p.Glu1399Lys 10958763:111:1833
status: NEW
view ABCA4 p.Glu1399Lys details
ABCA4 p.Gln1750*
X
ABCA4 p.Gln1750* 10958763:111:712
status: NEW
view ABCA4 p.Gln1750* details
ABCA4 p.Ser1689Pro
X
ABCA4 p.Ser1689Pro 10958763:111:1117
status: NEW
view ABCA4 p.Ser1689Pro details
ABCA4 p.Cys1488Tyr
X
ABCA4 p.Cys1488Tyr 10958763:111:465
status: NEW
view ABCA4 p.Cys1488Tyr details
ABCA4 p.Arg572Gln
X
ABCA4 p.Arg572Gln 10958763:111:754
status: NEW
view ABCA4 p.Arg572Gln details
ABCA4 p.Cys230Ser
X
ABCA4 p.Cys230Ser 10958763:111:1915
status: NEW
view ABCA4 p.Cys230Ser details
ABCA4 p.Gly607Arg
X
ABCA4 p.Gly607Arg 10958763:111:1618
status: NEW
view ABCA4 p.Gly607Arg details
ABCA4 p.Tyr2203*
X
ABCA4 p.Tyr2203* 10958763:111:1204
status: NEW
view ABCA4 p.Tyr2203* details
ABCA4 p.Tyr2203*
X
ABCA4 p.Tyr2203* 10958763:111:1972
status: NEW
view ABCA4 p.Tyr2203* details
ABCA4 p.Ser765Arg
X
ABCA4 p.Ser765Arg 10958763:111:1179
status: NEW
view ABCA4 p.Ser765Arg details
ABCA4 p.Arg1097Cys
X
ABCA4 p.Arg1097Cys 10958763:111:1965
status: NEW
view ABCA4 p.Arg1097Cys details
ABCA4 p.Cys764Tyr
X
ABCA4 p.Cys764Tyr 10958763:111:797
status: NEW
view ABCA4 p.Cys764Tyr details
ABCA4 p.Ser1063Pro
X
ABCA4 p.Ser1063Pro 10958763:111:686
status: NEW
view ABCA4 p.Ser1063Pro details
ABCA4 p.Gly1748Arg
X
ABCA4 p.Gly1748Arg 10958763:111:1896
status: NEW
view ABCA4 p.Gly1748Arg details
ABCA4 p.Gln635Lys
X
ABCA4 p.Gln635Lys 10958763:111:1135
status: NEW
view ABCA4 p.Gln635Lys details
ABCA4 p.Phe1440Val
X
ABCA4 p.Phe1440Val 10958763:111:1889
status: NEW
view ABCA4 p.Phe1440Val details
ABCA4 p.Glu1885Lys
X
ABCA4 p.Glu1885Lys 10958763:111:1045
status: NEW
view ABCA4 p.Glu1885Lys details
ABCA4 p.Arg1705Leu
X
ABCA4 p.Arg1705Leu 10958763:111:1947
status: NEW
view ABCA4 p.Arg1705Leu details
ABCA4 p.Ala60Thr
X
ABCA4 p.Ala60Thr 10958763:111:1302
status: NEW
view ABCA4 p.Ala60Thr details
ABCA4 p.Leu1430Pro
X
ABCA4 p.Leu1430Pro 10958763:111:824
status: NEW
view ABCA4 p.Leu1430Pro details
ABCA4 p.Leu1430Pro
X
ABCA4 p.Leu1430Pro 10958763:111:831
status: NEW
view ABCA4 p.Leu1430Pro details
Likewise, for the intron 28 alteration, a spliced product Table 5 Patients with STGD Who Have Two Identified Disease Alleles AGE AT ONSET AND PATIENT MUTATION SEGREGATION IN FAMILY a Allele 1 Allele 2 5-9 years: STGD17 Q1412X R2077W Yes STGD88 G65E G1961E NA STGD93 G1961E G1961E Yes STGD99 L541P-A1038V G1961E Yes STGD100 L541P-A1038V IVS40ϩ5GrA Yes STGD108 Y362X IVS40ϩ5GrA Yes STGD109 L541P-A1038V W855X Yes STGD139b 5917delG 5917delG Yes STGD167 C1488Y IVS40ϩ5GrA Yes 10-14 years: STGD21 R681X R1898H NA STGD37 L541P-A1038V L541P-A1038V Yes STGD47/164 IVS13ϩ1GrA 2588GrC Yes STGD50 2588GrC A1038V NA STGD70 2588GrC IVS40ϩ5GrA NA STGD82 L541P-A1038V S1063P Yes STGD87 2588GrC Q1750X Yes STGD98 R212C T959I Yes STGD102 R572Q-2588GrC IVS35ϩ2TrA Yes STGD107 C764Y 3528ins4 Yes STGD120 L1430P L1430P NA STGD121 R1300X IVS40ϩ5GrA Yes STGD156 R1108C G1961E NA STGD159 R1108C Q1412X Yes STGD171 L541P-A1038V G1961E NA 15-19 years: STGD34 G768T G1961E Yes STGD39 L541P-A1038V R1443H NA STGD40/163 2588GrC E1885K Yes STGD45 E1399K G1977S Yes STGD59 R1898H G1975R NA STGD67 P68L S1689P Yes STGD75 Q635K IVS40ϩ5GrA Yes STGD111 2292delT-S765R G1961E Yes STGD114 Y2203X G1961E Yes STGD138 IVS13ϩ1GA 2588GrC Yes 20-24 years: STGD41 R681X G1961E Yes STGD63 A60T R1898H NA STGD86 296insA G1961E Yes STGD91 L541P-A1038V A1038V NA STGD113 L541P-A1038V 2588GrC Yes STGD118b IVS20ϩ5GrA G1961E Yes STGD119 L541P-A1038V G1961E Yes STGD122 L541P-A1038V G1961E Yes STGD135 W663X G1961E NA STGD147 IVS36ϩ1GrA G1961E Yes STGD168 L541P-A1038V G1961E NA 25-29 years: STGD62 G607R G1961E NA STGD71 296insA A1038V Yes STGD78 2588GrC Q1412X Yes STGD103 2588GrC IVS20ϩ5GrA Yes STGD116 L541P-A1038V G1961E Yes STGD139bb G1961E 5917delG Yes у30 years: STGD38 E471K G1961E Yes STGD68 E1399K G1961E Yes STGD69 L541P-A1038V 2588GrC NA STGD95 F1440V G1748R Yes STGD134 C230S G1961E NA STGD144 2588GrC R1705L NA STGD148 R1097C Y2203X NA STGD170 L541P-A1038V 2588GrC NA a NA p not applicable. Login to comment
125 ABCA4 p.Arg1300*
X
ABCA4 p.Arg1300* 10958763:125:185
status: NEW
view ABCA4 p.Arg1300* details
ABCA4 p.Tyr362*
X
ABCA4 p.Tyr362* 10958763:125:166
status: NEW
view ABCA4 p.Tyr362* details
Two patients, STGD108 and STGD121, are heterozygous for both an alteration in the donor splice site of intron 40 (IVS40ϩ5GrA) and a nonsense mutation (STGD108, Y362X and STGD121, R1300X). Login to comment
142 ABCA4 p.Leu1970Phe
X
ABCA4 p.Leu1970Phe 10958763:142:272
status: NEW
view ABCA4 p.Leu1970Phe details
ABCA4 p.Arg152Gln
X
ABCA4 p.Arg152Gln 10958763:142:253
status: NEW
view ABCA4 p.Arg152Gln details
ABCA4 p.Val1921Met
X
ABCA4 p.Val1921Met 10958763:142:260
status: NEW
view ABCA4 p.Val1921Met details
As well as changes not affecting the specificity of amino acid residues and conservative amino acid substitutions, included in the latter category are some rare nonconservative changes found in similar frequencies in the three study groups-for example, R152Q, V1921M, and L1970F. Login to comment
143 ABCA4 p.Asp2177Asn
X
ABCA4 p.Asp2177Asn 10958763:143:62
status: NEW
view ABCA4 p.Asp2177Asn details
Under our definitions, the conservative amino acid alteration D2177N, which has been described elsewhere as associated with AMD (Allikmets et al. 1997a; Allikmets and the International ABCR Screening Consortium 2000), was also classified as a rare sequence variant. Login to comment
145 ABCA4 p.Ile1562Thr
X
ABCA4 p.Ile1562Thr 10958763:145:118
status: NEW
view ABCA4 p.Ile1562Thr details
A notable finding is the high frequencies in the control group of two independent alterations, IVS16-12CrG (1.8%) and I1562T (1.4%), in contrast to their complete absence in the group with STGD as well as in the group with AMD. Login to comment
146 ABCA4 p.Ile1562Thr
X
ABCA4 p.Ile1562Thr 10958763:146:54
status: NEW
view ABCA4 p.Ile1562Thr details
Although IVS16-12CrG has not been reported elsewhere, I1562T has been found two times in patients with AMD but not in those with STGD or in 220 controls (Allikmets et al. 1997a). Login to comment
149 ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:149:130
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:149:118
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:149:112
status: NEW
view ABCA4 p.Leu541Pro details
Although the majority of mutations are rare, found in only one or two families, three disease alleles (2588GrC, L541P-A1038V, and G1961E) are present at high frequencies in the German population. Login to comment
150 ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:150:21
status: NEW
view ABCA4 p.Gly1961Glu details
The most frequent is G1961E, which represents 34 (20.5%) of 166 identified alleles, a frequency that is significantly higher than the 4%-9% reported in other studies (Allikmets 1997a; Lewis et al. 1999; Maugeri et al. 1999; Simonelli et al. 2000). Login to comment
152 ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:152:58
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:152:100
status: NEW
view ABCA4 p.Leu541Pro details
The second-most-frequent allele is a complex allele, with A1038V occurring on the same haplotype as L541P (21/166 [12.7%]). Login to comment
153 ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:153:13
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:153:79
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:153:73
status: NEW
view ABCA4 p.Leu541Pro details
Although the A1038V mutation is commonly reported in the literature, the L541P-A1038V complex allele has been reported only five times (Rozet et al. 1998; Fishman et al. 1999; Lewis et al. 1999; Maugeri et al. 1999). Login to comment
156 ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:156:65
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Arg681*
X
ABCA4 p.Arg681* 10958763:156:58
status: NEW
view ABCA4 p.Arg681* details
ABCA4 p.Arg1108Cys
X
ABCA4 p.Arg1108Cys 10958763:156:94
status: NEW
view ABCA4 p.Arg1108Cys details
ABCA4 p.Arg1898His
X
ABCA4 p.Arg1898His 10958763:156:110
status: NEW
view ABCA4 p.Arg1898His details
ABCA4 p.Gln1412*
X
ABCA4 p.Gln1412* 10958763:156:102
status: NEW
view ABCA4 p.Gln1412* details
These three alterations, in combination with five others (R681X, A1038V as noncomplex allele, R1108C, Q1412X, R1898H, and IVS40ϩ5GrA), account for 61.4% of the detectable disease chromosomes in the German patients with STGD. Login to comment
172 ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:172:164
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:172:153
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Leu541Pro
X
ABCA4 p.Leu541Pro 10958763:172:147
status: NEW
view ABCA4 p.Leu541Pro details
On the contrary, specific mutations are associated with highly variable ages at onset; for example, compound heterozygosity for the complex allele L541P-A1038V and G1961E was found in patients with age at onset of 9-25 years (table 5). Login to comment
176 ABCA4 p.Arg1300*
X
ABCA4 p.Arg1300* 10958763:176:89
status: NEW
view ABCA4 p.Arg1300* details
ABCA4 p.Tyr362*
X
ABCA4 p.Tyr362* 10958763:176:79
status: NEW
view ABCA4 p.Tyr362* details
Two additional patients, STGD108 and STGD121, each have a truncating mutation (Y362X and R1300X) in combination with the splice-site mutation IVS40ϩ5GrA. Login to comment
182 ABCA4 p.Gly1961Glu
X
ABCA4 p.Gly1961Glu 10958763:182:189
status: NEW
view ABCA4 p.Gly1961Glu details
ABCA4 p.Asp2177Asn
X
ABCA4 p.Asp2177Asn 10958763:182:200
status: NEW
view ABCA4 p.Asp2177Asn details
This stands in contrast to a recentP p .72 study, involving 15 research groups from the United States and Europe, that specifically investigated the frequency of two common ABCA4 variants, G1961E and D2177N, in a large cohort (11,200 individuals each) of patients with AMD and of controls (Allikmets and The International ABCR Screening Consortium 2000). Login to comment
189 ABCA4 p.Ala1038Val
X
ABCA4 p.Ala1038Val 10958763:189:66
status: NEW
view ABCA4 p.Ala1038Val details
ABCA4 p.Arg1898His
X
ABCA4 p.Arg1898His 10958763:189:78
status: NEW
view ABCA4 p.Arg1898His details
The findings in this study point to additional variants (2588GrC, A1038V, and R1898H) that are present in reasonable frequencies in the German population and that may be worthwhile candidates for further extended analyses in large-scale international efforts. Login to comment