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PMID: 11001817
Chen JM, Scotet V, Ferec C
Definition of a "functional R domain" of the cystic fibrosis transmembrane conductance regulator.
Mol Genet Metab. 2000 Sep-Oct;71(1-2):245-9.,
[PubMed]
Sentences
No.
Mutations
Sentence
Comment
30
ABCC7 p.Ala613Thr
X
ABCC7 p.Ala613Thr 11001817:30:28
status:
NEW
view ABCC7 p.Ala613Thr details
ABCC7 p.Asp648Val
X
ABCC7 p.Asp648Val 11001817:30:121
status:
NEW
view ABCC7 p.Asp648Val details
ABCC7 p.Asp614Gly
X
ABCC7 p.Asp614Gly 11001817:30:35
status:
NEW
view ABCC7 p.Asp614Gly details
ABCC7 p.Gly628Arg
X
ABCC7 p.Gly628Arg 11001817:30:63
status:
NEW
view ABCC7 p.Gly628Arg details
ABCC7 p.Thr665Ser
X
ABCC7 p.Thr665Ser 11001817:30:130
status:
NEW
view ABCC7 p.Thr665Ser details
ABCC7 p.Leu619Ser
X
ABCC7 p.Leu619Ser 11001817:30:49
status:
NEW
view ABCC7 p.Leu619Ser details
ABCC7 p.Ile618Thr
X
ABCC7 p.Ile618Thr 11001817:30:42
status:
NEW
view ABCC7 p.Ile618Thr details
ABCC7 p.His620Pro
X
ABCC7 p.His620Pro 11001817:30:56
status:
NEW
view ABCC7 p.His620Pro details
ABCC7 p.Leu610Ser
X
ABCC7 p.Leu610Ser 11001817:30:21
status:
NEW
view ABCC7 p.Leu610Ser details
ABCC7 p.Ile601Phe
X
ABCC7 p.Ile601Phe 11001817:30:14
status:
NEW
view ABCC7 p.Ile601Phe details
ABCC7 p.Leu633Pro
X
ABCC7 p.Leu633Pro 11001817:30:74
status:
NEW
view ABCC7 p.Leu633Pro details
Second, while
I601F
,
L610S
,
A613T
,
D614G
,
I618T
,
L619S
,
H620P
,
G628R
, and
L633P
resulted in aberrant processing, neither
D648V
or
T665S
caused an arrest in protein maturation (8).
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31
ABCC7 p.Asp648Val
X
ABCC7 p.Asp648Val 11001817:31:14
status:
NEW
view ABCC7 p.Asp648Val details
Additionally,
D648V
did not significantly affect chloride transport ability compared with wild-type CFTR channels (8).
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32
ABCC7 p.Asp651Asn
X
ABCC7 p.Asp651Asn 11001817:32:26
status:
NEW
view ABCC7 p.Asp651Asn details
Another missense mutation
D651N
that changes a conserved, negatively charged residue was reported to be a neutral polymorphism (11).
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45
ABCC7 p.Val754Met
X
ABCC7 p.Val754Met 11001817:45:20
status:
NEW
view ABCC7 p.Val754Met details
ABCC7 p.Ala800Gly
X
ABCC7 p.Ala800Gly 11001817:45:38
status:
NEW
view ABCC7 p.Ala800Gly details
ABCC7 p.Phe693Leu
X
ABCC7 p.Phe693Leu 11001817:45:13
status:
NEW
view ABCC7 p.Phe693Leu details
ABCC7 p.Thr760Met
X
ABCC7 p.Thr760Met 11001817:45:27
status:
NEW
view ABCC7 p.Thr760Met details
For example,
F693L
,
V754M
,
T760M
, and
A800G
may be assigned as neutral polymorphisms.
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46
ABCC7 p.Phe693Leu
X
ABCC7 p.Phe693Leu 11001817:46:8
status:
NEW
view ABCC7 p.Phe693Leu details
Indeed,
F693L
was considered to be a neutral polymorphism due to its presence in healthy subjects (unpublished data) and this was confirmed by functional analysis (8).
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47
ABCC7 p.Glu826Lys
X
ABCC7 p.Glu826Lys 11001817:47:22
status:
NEW
view ABCC7 p.Glu826Lys details
ABCC7 p.Glu822Lys
X
ABCC7 p.Glu822Lys 11001817:47:12
status:
NEW
view ABCC7 p.Glu822Lys details
Conversely,
E822K
and
E826K
both change a stringently or well-conserved, negatively charged residue to a positively charged one and therefore would be speculated to produce some functional consequences.
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49
ABCC7 p.Asp836Tyr
X
ABCC7 p.Asp836Tyr 11001817:49:21
status:
NEW
view ABCC7 p.Asp836Tyr details
ABCC7 p.Glu725Lys
X
ABCC7 p.Glu725Lys 11001817:49:11
status:
NEW
view ABCC7 p.Glu725Lys details
Similarly,
E725K
and
D836Y
both occur in well-conserved, FIG. 1.
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60
ABCC7 p.Lys698Arg
X
ABCC7 p.Lys698Arg 11001817:60:23
status:
NEW
view ABCC7 p.Lys698Arg details
For example, while the
K698R
substitution affects a strictly conserved residue, it retains the consensus phosphorylation sequence (R-R/K-X-S).
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61
ABCC7 p.Lys698Arg
X
ABCC7 p.Lys698Arg 11001817:61:6
status:
NEW
view ABCC7 p.Lys698Arg details
Thus,
K698R
appears to be a neutral polymorphism.
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62
ABCC7 p.Arg766Met
X
ABCC7 p.Arg766Met 11001817:62:14
status:
NEW
view ABCC7 p.Arg766Met details
ABCC7 p.Arg766Met
X
ABCC7 p.Arg766Met 11001817:62:138
status:
NEW
view ABCC7 p.Arg766Met details
ABCC7 p.Arg766Met
X
ABCC7 p.Arg766Met 11001817:62:211
status:
NEW
view ABCC7 p.Arg766Met details
The fact that
R766M
changes a most favorable phosphorylation sequence (R-R/K-X-S) to a less favorable one (R-X-X-S) suggests that even if
R766M
produces any effect, its effect must be minor and, in this regard,
R766M
did not show significant functional difference compared with wild-type CFTR (8).
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63
ABCC7 p.Arg792Gly
X
ABCC7 p.Arg792Gly 11001817:63:13
status:
NEW
view ABCC7 p.Arg792Gly details
In contrast,
R792G
, which disrupts a consensus recognition site for PKA, gave rise to chloride channels with significantly lower Po than the wild-type channel (8).
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