ABCC7 p.Met348Lys

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PMID: 10439967 [PubMed] Liechti-Gallati S et al: "Two buffer PAGE system-based SSCP/HD analysis: a general protocol for rapid and sensitive mutation screening in cystic fibrosis and any other human genetic disease."
No. Sentence Comment
92 The technique developed demonstrates excellent single-strand separation and non-radioactive visualisation on polyacrylamide gels, and is time-saving and directly Table 2 Known mutations identified in 198 CF patients analysed investigatively Exon (E) Number of CFTR mutations intron (I) chromosomes Patient`s nationality Highest prevalence ∆F508 E10 212 miscellaneous 3905insT E20 025 Swiss Swiss, Amish, Arcadian R553X E11 020 Swiss, German German 1717-1G->A I10 017 Swiss, Italian Italian N1303K E21 011 Swiss, French, Italian Italian W1282X E20 014 Swiss, Italian, Israelit Jewish-Askhenazi G542X E11 009 Swiss, Spanish, Italian Spanish 2347delG E13 008 Swiss R1162X E19 006 Swiss, Italian, Russian Italian 3849+10kbC->T I19 005 German, French R347P E07 004 Swiss T5 I08 004 Swiss R334W E07 003 Swiss Q525X E10 003 Swiss 3732delA E19 003 Swiss S1235R E19 003 Italian, Turkish G85E E03 002 Italian, Greek I148T E04 002 Austrian, Turkish French-Canadian 621+1G->T I04 002 French French-Canadian 1078delT E07 002 Swiss E585X E12 002 Italian 2176insC E13 002 Swiss, Italian 2789+5G->A I14b 002 Italian Spanish D1152H E18 002 Swiss, French 4016insT E21 002 Turkish Q39X E02 001 Swiss 394delTT E03 001 Swiss Nordic, Finnish R117H E04 001 Swiss A120T E04 001 Swiss G126D E04 001 Swiss 711+5G->A I05 001 Russian M348K E07 001 Italian L568F E12 001 Italian 2183AA->G E13 001 Italian Italian K710X E13 001 Swiss S945L E15 001 French 3272-26A.->G I17a 001 Swiss M1101K E17b 001 Swiss Huttite 3601-17C->T I18 001 Swiss R1158X E19 001 Swiss 4005+1G-A I20 001 Italian applicable to early diagnostic testing, carrier detection and prenatal diagnosis.
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ABCC7 p.Met348Lys 10439967:92:1313
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PMID: 10755189 [PubMed] Stuhrmann M et al: "CFTR gene mutations and male infertility."
No. Sentence Comment
239 Holsclaw DS, Perlmutter AD, Jockin H, Shwachman H (1971)Deltas CC, Boteva K, Georgiou A, Papageorgiou E, Georgiou Genital abnormalities in male patients with cystic fibrosis.C (1996) Description of a symptomless cystic fibrosis J Urol 106:568-574.L346P/M348K compound heterozygous Cypriot individ- Jarvi K, Zielenski J, Wilschanski M, Durie P, Buckspan M,ual.
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ABCC7 p.Met348Lys 10755189:239:253
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PMID: 11168024 [PubMed] Scotet V et al: "Prevalence of CFTR mutations in hypertrypsinaemia detected through neonatal screening for cystic fibrosis."
No. Sentence Comment
74 We noted, among heterozygous children, a high proportion of mild mutations (R297Q, R347H, M348K, A349V, G544S) or for which the pathogenicity is yet impossible to determine (V317A, V322A, R553G).
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ABCC7 p.Met348Lys 11168024:74:90
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PMID: 15084222 [PubMed] D'Apice MR et al: "Molecular analysis using DHPLC of cystic fibrosis: increase of the mutation detection rate among the affected population in Central Italy."
No. Sentence Comment
89 Table 1: Primers and DHPLC (oven temperature, gradient) analysis conditions for 6b and 9 exons of the CFTR gene exon Primer 5' → 3' Amplicon length Oven temp (°C) % B buffer start/end 6b F - CAGAGATCAGAGAGCTGGG 323 56 55/63 R - GAGGTGGAAGTCTACCATGA 9 F - GGGATTTGGGGAATTATTTG 279 55 54/62 R - TCTCCAAAAATACCTTCCAG Table 2: CF mutations identified in cohort of 290 patients from the Central Italy Mutation Nucleotide change Exon/intron N % Method delF508 1652delCTT 10 328 56.36 INNO-LiPA, DHPLC N1303K 4041 C to G 21 51 8.76 INNO-LiPA, DHPLC G542X 1756 G to T 11 42 7.21 INNO-LiPA, DHPLC W1282X 3978 G to A 20 15 2.60 INNO-LiPA, DHPLC S549R 1779 T to G 11 8 1.37 DHPLC 621+1G-T 621+1 G to T Intron 4 7 1.20 INNO-LiPA, DHPLC 1717-1G-A 1717-1 G to A Intron 10 5 0.86 INNO-LiPA, DHPLC G85E 386 G to A 3 4 0.69 INNO-LiPA, DHPLC R553X 1789 C to T 11 4 0.69 INNO-LiPA, DHPLC H139R 548 A to G 6a 3 0.51 DHPLC R347P 1172 G to C 7 3 0.51 INNO-LiPA, DHPLC L1065P 3326 T to C 17b 3 0.51 DHPLC L1077P 3362 T to C 17b 3 0.51 DHPLC S4X 143 C to A 1 2 0.34 DHPLC D110H 460 G to C 4 2 0.34 DHPLC R334W 1132 C to T 7 2 0.34 INNO-LiPA, DHPLC M348K 1175 T to A 7 2 0.34 DHPLC 1259insA 1259 ins A 8 2 0.34 DHPLC S549N 1778 G to A 11 2 0.34 DHPLC L558S 1805 T to C 11 2 0.34 DHPLC 2183+AA-G 2183 A to G and 2184 del A 13 2 0.34 INNO-LiPA, DHPLC 2789+5G-A 2789+5 G to A Intron 14b 2 0.34 INNO-LiPA, DHPLC R1066C 3328 C to T 17b 2 0.34 DHPLC 3667ins4 3667insTCAA 19 2 0.34 DHPLC S42F 257 C to T 2 2 0.34 DHPLC R117L 482 G to T 4 1 0.17 DHPLC H199R 728 A to G 6a 1 0.17 DHPLC R334L 1133 G to T 7 1 0.17 DHPLC T338I 1145 C to T 7 1 0.17 DHPLC G551D 1784 G to A 11 1 0.17 INNO-LiPA, DHPLC Q552X 1786 C to T 11 1 0.17 INNO-LiPA, DHPLC D614G 1973 A to G 13 1 0.17 DHPLC A1006E 3149 C to A 17a 1 0.17 DHPLC 4016insT 4016 ins T 21 1 0.17 DHPLC 4040delA 4040 del A 21 1 0.17 DHPLC 4167del7 4167 delCTAAGCC 22 1 0.17 DHPLC Detected 511 88.10 Unknown 69 11.90 Total 580 100.00 N = number of CF chromosomes; % = frequency.
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ABCC7 p.Met348Lys 15084222:89:1138
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PMID: 15614862 [PubMed] D'Apice MR et al: "Segregation analysis in cystic fibrosis at-risk family demonstrates that the M348K CFTR mutation is a rare innocuous polymorphism."
No. Sentence Comment
2 DOI: 10.1002/pd.1058 Segregation analysis in cystic fibrosis at-risk family demonstrates that the M348K CFTR mutation is a rare innocuous polymorphism Maria Rosaria D`Apice1 , Stefano Gambardella1 , Silvia Russo1 , Vincenzina Lucidi2 , Anna Maria Nardone3 , Adalgisa Pietropolli4 and Giuseppe Novelli1,3 * 1 Department of Biopathology and Imaging Diagnostic, Tor Vergata University, Rome, Italy 2 Bambino Ges`u Children`s Hospital, Rome, Italy 3 Department of Medical Laboratory, Section of Medical Genetics, Tor Vergata University, Rome, Italy 4 Department of Surgery, Section of Obstetrics and Gynaecology, Tor Vergata University, Rome, Italy Objective Cystic fibrosis (CF; OMIM# 219700) is caused by mutation in the CF transmembrane regulator (CFTR) gene.
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ABCC7 p.Met348Lys 15614862:2:98
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3 We investigate whether the (paternal) M348K mutation is a benign polymorphism or a disease-causing mutation in a patient clinically affected with CF, with the second (maternal) CFTR allele identified as N1303K.
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ABCC7 p.Met348Lys 15614862:3:38
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6 Results The CFTR gene from the healthy father has two mutations, M348K and G1244E.
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ABCC7 p.Met348Lys 15614862:6:65
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10 Conclusion M348K in the CFTR gene is not a mutation causing CF, but a rare polymorphism.
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ABCC7 p.Met348Lys 15614862:10:11
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26 This demonstrates that the M348K variation is not a causative CF mutation.
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ABCC7 p.Met348Lys 15614862:26:27
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28 Received: 30 April 2004 Revised: 7 October 2004 Accepted: 10 October 2004 M. R. D`APICE ET AL. 1 1 1 1 3 4 1 2 1 1 4 1 1 2 1 1 4 1 1 2 1 1 2 1I:1 II:1 II:2 I:2 G1244E M348K G1244E N1303K N1303K G1244E N1303K IVS8GT IVS17bCA IVS17bTA IVS8GT IVS17bCA IVS17bTA IVS8GT IVS17bCA IVS17bTA IVS8GT IVS17bCA IVS17bTA Figure 1-The reported family pedigree.
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ABCC7 p.Met348Lys 15614862:28:169
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30 Their asymptomatic father (I:1) shows the G1244E CF mutation and the M348K polymorphism; their mother (I:2) shows the N1303K mutation.
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ABCC7 p.Met348Lys 15614862:30:69
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36 Abnormal DHPLC patterns were observed for exons 7 and 20 (Figure 1), caused by nucleotide changes (T to A at position 1175, missense mutation M348K; G to A in position 3863, missense mutation G1244E).
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ABCC7 p.Met348Lys 15614862:36:142
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40 The M348K mutation was first reported by Audrezet et al. (1993) in a severely affected Italian patient with pancreatic insufficiency and lung involvement.
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ABCC7 p.Met348Lys 15614862:40:4
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41 However, in another report, Deltas et al. (1996) described a Cypriot individual without symptoms of CF who is compound heterozygous for L346P/M348K.
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ABCC7 p.Met348Lys 15614862:41:142
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44 Since the father has no symptoms of CF, and has the genotype M348/G1244E, M348K must be a rare polymorphism in the CFTR gene that is not disease-associated, at least in association with G1244E.
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ABCC7 p.Met348Lys 15614862:44:74
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45 If a patient with CF is shown to have the mutation M348K, as in this case, the gene should be scanned for other mutations.
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ABCC7 p.Met348Lys 15614862:45:51
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55 The M348K amino acid change is a rare polymorphism rather than a CF-causing mutation, as previously reported.
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ABCC7 p.Met348Lys 15614862:55:4
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PMID: 16126774 [PubMed] Morea A et al: "Gender-sensitive association of CFTR gene mutations and 5T allele emerging from a large survey on infertility."
No. Sentence Comment
76 This test involved nine subjects from the infertile group, revealing the occurrence of the following rare mutations: E217G, T1054A, W356X, D443Y and 3667insTC in males and L997F and R297Q in females and 29 subjects from the control, in which we found: A1009T, D110Y, E826K, G1069R, G1130A, G194V, I556V, L320F, M348K, M82V, P1290T, R117C, R352W, R74W, S42F, S660T, S911R, S912L, T1086A, T582S, V920L and Y89C.
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ABCC7 p.Met348Lys 16126774:76:314
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PMID: 16128988 [PubMed] Larriba S et al: "Molecular evaluation of CFTR sequence variants in male infertility of testicular origin."
No. Sentence Comment
51 CFTR analysis We identified 14 different, potential disease-causing CFTR sequence variants, 11 of them are translated into missense amino acid changes (p.R75Q, p.P111L, p.R117H, p.I148T, p.R334W, p.M348K, p.G576A, p.R668C, p.D1270N, p.S1235R and p.S1426F), one deletion (p.F508del) and two alleles affecting exon splicing [IVS8-6(5T), c.1716G>A] in 30 of 83 infertile patients (Table 1) giving a frequency of 36.1%.
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ABCC7 p.Met348Lys 16128988:51:198
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72 Description of genetic abnormalities and other risk factors of infertile and fertile CFTR carrier individuals No. Phenotype CFTR genotype Associated factors Testicular histologya b c Infertile individuals 1 NOb (SO) p.R75Q No Severe hypospermatogenesis 2 NOb (SO) p.R75Q No nd 3 NOb (A) p.P111L AZFb,c del Sertoli cell only 4 NOb (A) p.R117H AZFc del Severe hypospermatogenesis 5 NOb (SO) p.I148T No Severe hypospermatogenesis 6 NOb (A) p.R334W No Primary spermatocyte arrest 7 NOb (SO) p.M348K UV grade III Primary spermatocyte arrest 8 NOb (A) p.F508del No Sertoli cell only 9 NOb (A) p.F508del No Primary spermatocyte arrest 10 NOb (A) p.G576A, p.R668C No Severe hypospermatogenesis, Leydig cell hyperplasia 11 NOb (SO) p.G576A, p.R668C No Primary spermatocyte arrest (unilateral) 12 NOb (SO) p.G576A, p.R668C No Severe hypospermatogenesis 13 NOb (A) p.R668C UC Sertoli cell-only (incomplete) 14 NOb (SO) p.D1270N No nd 15 NOb (SO) p.S1235R No Severe hypospermatogenesis 16 NOb (SO) p.S1426F* UC Sertoli cell only 17 NOb (A) (T)5-(TG)12 No Severe hypospermatogenesis, Sertoli cell only (80%) 18 NOb (A) (T)5-(TG)12 No Sertoli cell only 19 NOb (SO) (T)5-(TG)11 UV grade III Bilateral moderate hypospermatogenesis 20 NOb (SO) (T)5-(TG)11 UV grade II Severe hypospermatogenesis 21 NOb (A) (T)5-(TG)11 No nd 22 NOb (SO) c.1716 G>A Dysplasia SV Severe hypospermatogenesis, Sertoli cell only (95%) 23 NOb (A) c.1716 G>A No nd 24 NOb (A) c.1716 G>A No Primary spermatocyte arrest (bilateral) 25 NOb (SO) c.1716 G>A No Sertoli cell only (95%) 26 NOb (SO) c.1716 G>A No Severe hypospermatogenesis 27 NOb (SO) c.1716 G>A UV grade III Severe hypospermatogenesis 28 NOb (SO) c.1716 G>A No nd 29 NOb (SO) c.1716 G>A No nd 30 NOb (SO) c.1716 G>A AZFc del Severe hypospermatogenesis Fertile individuals 1 F1 p.R75Q No nd 2 F1 p.F508del No nd 3 F1 p.F508del No nd 4 F1 p.G576A, p.R668C/ c.1716 G>A No nd 5 F1 p.D836Y No nd 6 F1 p.S1235R/c.1716 G>A No nd 7 F1 c.1716 G>A No nd 8 F1 c.1716 G>A No nd 9 F1 c.1716 G>A No nd 10 F1 c.1716 G>A No nd 11 F1 c.1716 G>A No nd 12 F2 p.R75Q No nd the expected CF carrier frequency in the local population (Van der Ven et al., 1996; Larriba et al., 2001; Dohle et al., 2002) or with the general population (Jakubiczka et al., 1999; Pallares-Ruiz et al., 1999; Ravnik-Glavac et al., 2001) and not normospermic fertile individuals, the latter considered as adequate controls.
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ABCC7 p.Met348Lys 16128988:72:489
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PMID: 22274833 [PubMed] Hentschel J et al: "Homozygous CFTR mutation M348K in a boy with respiratory symptoms and failure to thrive. Disease-causing mutation or benign alteration?"
No. Sentence Comment
0 ORIGINAL ARTICLE Homozygous CFTR mutation M348K in a boy with respiratory symptoms and failure to thrive.
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ABCC7 p.Met348Lys 22274833:0:42
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5 Sequencing of this region revealed the homozygous substitution 1175 T>A (HGVS: c.1043 T>A) in exon 7 resulting in the homozygous amino acid change M348K.
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ABCC7 p.Met348Lys 22274833:5:147
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7 Computational analysis tools classified M348K as 'presumably disease causing.` In our patient, sweat testing and electrophysiological assessment of CFTR function in native rectal epithelium demonstrated normal Cl- secretion.
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ABCC7 p.Met348Lys 22274833:7:40
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8 Conclusion: We assume that the homozygous alteration M348K is a harmless variant rather than a CF-causing mutation.
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ABCC7 p.Met348Lys 22274833:8:53
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11 M348K .
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ABCC7 p.Met348Lys 22274833:11:0
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16 We report on the first patient with homozygosity for the mutation M348K, with so far unknown clinical relevance.
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ABCC7 p.Met348Lys 22274833:16:66
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17 Until now, only three cases with heterozygote M348K mutation have been reported [3,5,6].
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ABCC7 p.Met348Lys 22274833:17:46
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18 First detected in a severely affected patient carrying F508del on the other allele [3], M348K was classified as a disease-causing mutation.
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ABCC7 p.Met348Lys 22274833:18:88
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19 Likewise, M348K is listed as a 'disease-causing mutation` in the Human Genome Mutation Database [9] which is the basis for training of most of the prediction tools.
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ABCC7 p.Met348Lys 22274833:19:10
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22 In another publication, M348K was found together with the mutation L346P in a 48-year-old unaffected individual [6].
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ABCC7 p.Met348Lys 22274833:22:24
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24 Therefore, the authors suggest that either L346P is dominant over M348K or that M348K is a J. Hentschel (*) :G. Riesener :H. Nelle :F. von Eggeling Institute of Human Genetics, Jena University Hospital, Kollegiengasse 10, 07743 Jena, Germany e-mail: julia.hentschel@mti.uni-jena.de J. Hentschel :J.
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ABCC7 p.Met348Lys 22274833:24:66
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ABCC7 p.Met348Lys 22274833:24:80
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28 The healthy father was found to be compound heterozygous for M348K and G1244E.
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ABCC7 p.Met348Lys 22274833:28:61
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30 Taken together, the clinical relevance of the M348K mutation remains unclear.
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ABCC7 p.Met348Lys 22274833:30:46
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62 PMut predictions are based on the use of neural networks, and the tool is trained using a Fig. 1 Original recordings of the effects of cAMP-dependent activation (IBMX/forskolin) and cholinergic activation (carbachol) on Vte and Rte in rectal tissues from a the patient (M348K/M348K) showing normal Cl- secretory responses (lumen-negative Vte responses), b a CF patient (1717- 1G→A/R764X) with no detectable Cl- secretion (lumen-positive Vte responses) and c a CF patient (F508del/R334W) expressing residual Cl- secretion, as evidenced by the attenuated lumen-negative Vte response and biphasic response to carbachol.
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ABCC7 p.Met348Lys 22274833:62:270
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ABCC7 p.Met348Lys 22274833:62:276
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72 The patient`s sample revealed a homozygous change T>A at the position 1175 (c.1043T>A) which results in amino acid replacement from methionine to lysine at codon 348 (M348K).
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ABCC7 p.Met348Lys 22274833:72:132
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ABCC7 p.Met348Lys 22274833:72:167
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74 M348K was not found in healthy controls and carbachol-induced Cl- secretion (Fig. 1b), whereas tissues from CF patients carrying at least one mutation with residual Cl- channel function (CFresidual) show attenuated cAMP-mediated Cl- secretory responses (previously published mean of CFresidual tissues: ΔIsc0-28.1±2.9 μA/cm2 [8]) followed by biphasic responses to carbachol (Fig. 1c).
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ABCC7 p.Met348Lys 22274833:74:0
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84 Codon 348 (ATG) was changed to AAG resulting in an amino acid change from methionine to lysine (M348K).
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ABCC7 p.Met348Lys 22274833:84:96
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85 Sequencing of parents and healthy elder brothers of the index patient revealed heterozygosity for M348K for all tested family members (Fig. 4).
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ABCC7 p.Met348Lys 22274833:85:98
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86 If one of the healthy brothers also had a homozygous M348K substitution, the alteration could have been easily classified as benign.
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ABCC7 p.Met348Lys 22274833:86:53
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87 M348K was not found in four sequenced control samples.
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ABCC7 p.Met348Lys 22274833:87:0
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90 Using the prediction tool PolyPhen2 [16], M348K was found to be 'probably damaging` (score 0.997).
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ABCC7 p.Met348Lys 22274833:90:42
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91 Also PMut [15] assessed the alteration M348K as 'pathological` with a score of 0.8245 (threshold for pathological alterations>0.5) and a confidence level of the prediction of 6 (00low, 90high confidence).
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ABCC7 p.Met348Lys 22274833:91:39
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96 3D structure of the CFTR protein illustrating the location of M6 (which harbours the M348K) within the MSD1 which forms the pore of the CFTR channel together with MSD2 further mutations and deletions, all 27 exons and flanking intronic regions of the CFTR gene were sequenced, and a MLPA analysis was performed, which revealed no further mutation in addition to the initially found M348K.
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ABCC7 p.Met348Lys 22274833:96:85
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ABCC7 p.Met348Lys 22274833:96:384
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97 Discussion This is the first report of a patient with a homozygous M348K CFTR mutation.
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ABCC7 p.Met348Lys 22274833:97:67
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101 Interestingly, this is inconsistent with previously evaluated prediction tools which classified the alteration M348K as 'presumably disease causing` or 'probably damaging`.
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ABCC7 p.Met348Lys 22274833:101:111
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106 Half of the detected mutations are associated with CF phenotype; for seven alterations (including M348K), the phenotype is not clear and investigations within the CFTR2 project are ongoing.
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ABCC7 p.Met348Lys 22274833:106:98
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112 Besides, tools were trained with published disease mutations and M348K mutation is listed as one.
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113 Taken together, our investigation suggests that the CFTR alteration M348K is a harmless variant rather than a CF-causing mutation. However, the question cannot finally be answered, whether the ongoing clinical problems like bronchial hyper reactivity and airway colonization with pathogens like MR S. aureus, H. influenzae and A. lwoffii are related to the changes in the CFTR gene or if they are due to premature birth.
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ABCC7 p.Met348Lys 22274833:113:68
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121 It could be speculated that a M348K mutation causes a decrease in CFTR function, but at the same time, a positive influence of modifiers results in residual function which can be measured via electrophysiology.
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ABCC7 p.Met348Lys 22274833:121:30
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PMID: 8865181 [PubMed] Deltas CC et al: "Description of a symptomless cystic fibrosis L346P/M348K compound heterozygous Cypriot individual."
No. Sentence Comment
0 Molecular and Cellular Probes (1996) 10, 315-318 Short Communication Description of a symptomless cystic fibrosis L346P/ M348K compound heterozygous Cypriot individual C. Constantinou Deltas,1 * Kalina Boteva,1 Andreas Georgiou,2 Elena Papageorgiou1 and Christina Georgiou3 1 The Cyprus Institute of Neurology and Genetics, 2 Nicosia General Hospital, and 3 Archbishop Makarios III Hospital, Nicosia, Cyprus (Received 12 January, Accepted 6 February 1996) During the past few years we have been testing the hypothesis that Cyprus may have been spared many severe cystic fibrosis (CF) cases but not cystic fibrosis transmembrane conductance regulator (CFTR) mutations.
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ABCC7 p.Met348Lys 8865181:0:121
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3 Recently, we identified another entirely symptomless 48-year-old individual, with genotype L346P/M348K.
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ABCC7 p.Met348Lys 8865181:3:97
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4 The fact that M348K was initially identified in a severely affected Italian patient strengthens the hypothesis that L346P, a putative mild mutation, is dominant over severe ones.
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ABCC7 p.Met348Lys 8865181:4:14
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5 One other explanation is that M348K is not a causative defect but a rare polymorphism.
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ABCC7 p.Met348Lys 8865181:5:30
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18 1677delTA and M348K.
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ABCC7 p.Met348Lys 8865181:18:14
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24 Both nonsense and missense mutations have been reportedthat substituted lysine for methionine (M348K).
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ABCC7 p.Met348Lys 8865181:24:95
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34 pothesis that suggests that severe mutations are recessive over mild mutations.8,10,13 In the three CypriotOur patient (III-7, see Fig. 1) had inherited the M348K mutation from his mother who belongs to a patients, the same L346P mutation, which is present in exon 7, in one of the transmembrane domains offamily of nine siblings.
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ABCC7 p.Met348Lys 8865181:34:157
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37 It is associated with three dif-dividual II-2, not only inherited the M348K mutation, most probably from her father, but was found to be ferent mutations, reportedly found in severely affected patients.
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ABCC7 p.Met348Lys 8865181:37:70
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40 However, M348K which is just oneto each of her two offspring.
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ABCC7 p.Met348Lys 8865181:40:9
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43 She is rather short, but her sister II-11 is also short and is only a carrier of one mild,8 whereas the most recent patient with genotype L346P/M348K has almost no symptomatology at themutation.
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ABCC7 p.Met348Lys 8865181:43:144
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52 However, onemajor findings other than failure to thrive, occasional electrolyte disturbances and some chest infections in other likely explanation for the symptomless status of the 48-year-old lady described in this report is thatone of the patients.8 So far we are not aware of additional patients from other populations carrying mutation M348K does not really affect the function L346P/M348K CF symptomless individual 317 293 255 38 118 17 NlaIII NlaIII1 428 Abolished by the M348K mutation L346P M348K [M348K/N] L346P/N M348K/N M348K/N M348K/N M348K/N N/N N/N 1 2 3 4 5 6 7 8 9 10 11 12 1 2 1 2 3 4 5 6 7 M348K/NM348K/N L346P/N N/N M348K/?
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ABCC7 p.Met348Lys 8865181:52:340
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ABCC7 p.Met348Lys 8865181:52:389
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ABCC7 p.Met348Lys 8865181:52:391
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ABCC7 p.Met348Lys 8865181:52:479
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ABCC7 p.Met348Lys 8865181:52:482
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ABCC7 p.Met348Lys 8865181:52:500
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54 M348K/L356P N/N I II III I-2 II-2 III-1 III-2 II-5 III-3 II-6 II-7 II-9 II-10 II-11 II-12 III-6 III-7 I-2 II-2 II-2 III-1 III-2 II-5 III-3 II-6 II-7 II-9 II-10 II-11 II-12 III-7 Fig. 1.
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ABCC7 p.Met348Lys 8865181:54:0
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56 The proband was individual III-7, and his maternal aunt II-2 was found to have inherited mutations M348K and L346P.
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ABCC7 p.Met348Lys 8865181:56:99
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59 In the presence of the mutation, the 428 bp DNA product is cleaved to fragments of 266 bp and 162 bp.8 M348K was tested by amplification of exon 7 and digestion with NIaIII.
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ABCC7 p.Met348Lys 8865181:59:103
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PMID: 23083715 [PubMed] El Hiani Y et al: "Tuning of CFTR chloride channel function by location of positive charges within the pore."
No. Sentence Comment
43 After neutralization of this endogenous positive charge by the K95Q mutation, introduction of a positive charge at other sites (by mutagenesis to lysine) caused a significant increase in unitary conductance to between 51 5 1% (in K95Q/A349K; n &#bc; 10) and 77 5 1% (in K95Q/M348K; n &#bc; 12) of WT conductance (Fig. 2, A-C), suggesting that a positive charge located at other positions in the pore can effectively rescue the WT conductance phenotype.
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ABCC7 p.Met348Lys 23083715:43:275
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55 Additional mutations in a K95Q background to transplant the positive charge to pore-lining positions in TM1 (Q98K) or TM6 (I344K, V345K, M348K, and A349K) partially restored NPPB block (Fig. 3), although in no case was the block as strong as for the WT.
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ABCC7 p.Met348Lys 23083715:55:137
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56 The rank order of the apparent strength of NPPB block was WT > K95Q/V345K > K95Q/I344K > K95Q/Q98K ~ K95Q/ M348K ~ K95Q/A349K (Fig. 3 B).
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ABCC7 p.Met348Lys 23083715:56:107
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60 As shown in Fig. 4, block by Pt(NO2)4 2 was significantly strengthened in each of the mutants Q98K, I344K, V345K, M348K, and A349K, as well as in the previously unstudied S341K.
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ABCC7 p.Met348Lys 23083715:60:115
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61 At 0 mV membrane potential, the apparent Kd for Pt(NO2)4 2 block was in the rank order V345K (3.3 5 0.9 mM, n &#bc; 7) % I344K (4.5 5 0.7 mM, n &#bc; 6) < S341K (26.6 5 1.8 mM, n &#bc; 7) < M348K (80.9 5 7.2 mM, n &#bc; 5) % Q98K (95.4 5 11.0 mM, n &#bc; 6) % A349K (117.4 5 7.7 mM, FIGURE 2 Single-channel conductance is restored by moving the positive charge from K95.
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ABCC7 p.Met348Lys 23083715:61:191
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74 Blocker voltage dependence was also significantly changed in most mutants, with the effective blocker valence (zd) being significantly increased in M348K and significantly decreased in Q98K, V345K, and A349K (Fig. 4 F).
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ABCC7 p.Met348Lys 23083715:74:148
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90 However, although a single positive charge is necessary, the addition of a second positive charge to this region of the pore (as in the point mutants Q98K, I344K, V345K, M348K, and A349K) failed to increase conductance above WT levels (Fig. 2), as previously observed for S1141K (8).
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ABCC7 p.Met348Lys 23083715:90:170
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99 In fact, the addition of a second positive charge in Q98K, I344K, V345K, M348K, and A349K led to a small, but significant, decrease in conductance (Fig. 2 C).
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ABCC7 p.Met348Lys 23083715:99:73
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105 The weakening of blocker binding seen in K95Q is partially reversed by the second site mutations I344K and V345K, and to a lesser extent Q98K, M348K, and A349K.
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ABCC7 p.Met348Lys 23083715:105:143
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146 Again this appears to be a relatively nonsite-specific effect of positive charge, since all mutants studied (Q98K, S341K, I344K, V345K, M348K, and A349K) led to significant increase in apparent affinity of Pt(NO2)4 2 block (Fig. 4), as did S1141K (8).
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ABCC7 p.Met348Lys 23083715:146:136
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PMID: 25910067 [PubMed] Lucarelli M et al: "A Genotypic-Oriented View of CFTR Genetics Highlights Specific Mutational Patterns Underlying Clinical Macrocategories of Cystic Fibrosis."
No. Sentence Comment
270 The [M348K;S912X] (p.
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ABCC7 p.Met348Lys 25910067:270:5
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271 [Met348Lys; Ser912*]) complex allele was found in 2 patients (1 CF-PI and 1 CBAVD).
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ABCC7 p.Met348Lys 25910067:271:1
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370 991del5 c.859_863delAACTT CF-PI nd p.Asn287LysfsX19 L320V c.958T>G uncertain: CF-PI and/or CF-PS and/or CFTR-RD nd p.Leu320Val R334W c.1000C>T CF-PI,CF-PS CF-causing p.Arg334Trp R334L c.1001G>T CF-PS nd p.Arg334Leu T338I c.1013C>T CF-PS,CFTR-RD,CBAVD CF-causing p.Thr338Ile R347P c.1040G>C CF-PI,CF-PS CF-causing p.Arg347Pro R347H c.1040G>A CF-PS CF-causing p.Arg347His [M348K;S912X] c.
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ABCC7 p.Met348Lys 25910067:370:371
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371 [1043T>A;2735C>A] CF-PI M348K nd; S912X CF-causing p.
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ABCC7 p.Met348Lys 25910067:371:24
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372 [Met348Lys;Ser912*] [1249-8A>G;G576A;R668C] c.
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ABCC7 p.Met348Lys 25910067:372:1
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PMID: 26496611 [PubMed] Sorum B et al: "Timing of CFTR Pore Opening and Structure of Its Transition State."
No. Sentence Comment
74 Timing of Motion at Position 348 in the Pore Region (A) Inward single-channel currents of the cut-DR(D1370N) CFTR background construct (top trace) and of channels bearing mutations M348I, M348K, M348C, M348N, and M348A, respectively, in the same background. Currents were recorded at 80 mV, in symmetrical 140 mM Cl ; dashes on the left mark zero-current level.
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ABCC7 p.Met348Lys 26496611:74:188
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102 Interestingly, the M348K mutation only marginally affected gating (Figures 4A-4D) but increased the affinity for pore block by ATP, as reported by pronounced flickery block of single-channel currents in 10 mM ATP (Figure 4A), a bell-shaped ATP dose-dependence of macroscopic currents (Figure S1C, second blue bar), and a current overshoot upon ATP removal from macroscopic patches reflecting rapid unblock (Figure S2F).
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ABCC7 p.Met348Lys 26496611:102:19
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103 Of note, even for M348K, the macroscopic current relaxation time constant following ATP removal (i.e., tb in zero ATP; Figure S2F) remained comparable to steady-state tb: thus, even pronounced flickery block of M348K by 10 mM ATP does not delay pore closure, consistent with earlier demonstration that the gate, located on the extracellular side, can readily close while large organic anion blockers remain bound in the intracellular vestibule (Csana &#b4; dy and To &#a8; ro &#a8; csik, 2014).
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ABCC7 p.Met348Lys 26496611:103:18
status: NEW
X
ABCC7 p.Met348Lys 26496611:103:211
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