ABCG2 p.Ser441Asn

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PMID: 15475413 [PubMed] Kobayashi D et al: "Functional assessment of ABCG2 (BCRP) gene polymorphisms to protein expression in human placenta."
No. Sentence Comment
110 Of these, five SNPs resulted in the following amino acid substitutions: G34A (Val12Met), C376T (Gln126stop), C421A (Gln141Lys), G1322A (Ser441Asn), and T1465C (Phe489Leu).
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ABCG2 p.Ser441Asn 15475413:110:136
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112 C376T, which is associated with an amino acid substitution from Gln to a stop codon at codon 126 (Gln126stop), was detected in only two placental samples (1.0%) as TABLE 1 Genetic polymorphism in the BCRP gene in Japanese placentas (n ϭ 100) Location Positiona Reference Alleleb Variant Allele Amino Acid Substitution Genotype Frequency of Variant Allele R/R R/V V/V 5Ј-Flanking region -20445 gtctCctcc gtctTctcc 98 2 0 0.010 -20296 agctAttaa agctGttaa 80 18 2 0.110 -19781 aaaaAttat aaaaGttat 99 1 0 -19572_-19569 ctcaCTCAcaaa ctca--caaa 60 33 7 0.235 Exon 2 34 cccaGtgtc cccaAtgtc Val12Met 70 24 6 0.180 Intron 2 203 ϩ 16 tttaAttta tttaGttta 70 24 6 0.180 Intron 3 263 ϩ 10 tataAgaga tataGgaga 85 14 1 0.080 263 ϩ 72 ttttGtgtg ttttTGtgtg 99 1 0 0.005 Exon 4 376 ggtaCaagt ggtaTaagt Gln126stop 98 2 0 0.010 Exon 5 421 cttaCagtt cttaAagtt Gln141Lys 42 45 13 0.355 Intron 5 532-16 ttatAatat ttatGatat 99 1 0 0.005 Exon 9 1098 aggaGatca aggaAatca Synonymous 98 2 0 0.010 Intron 10 1277 ϩ 95 atagTgtaa atagAgtaa 97 3 0 0.015 Exon 11 1322 agcaGtgtt agcaAtgtt Ser441Asn 99 1 0 0.005 Intron 11 1367 ϩ 20 ttctAggaa ttctGggaa 71 25 4 0.165 Exon 12 1465 tataTttac tataCttac Phe489Leu 99 1 0 0.005 Intron 12 1492 ϩ 49 ctatGggtg ctatCggtg 44 45 11 0.335 Exon 13 1515 atgcCttct atgc-ttct Phe506Ser 99 1 0 0.005 Phe507Leu Val508Leu Met509stop Intron 13 1648-42 tgaaAttac tgaaTttac 99 1 0 0.005 1648-21 gactCttag gactTttag 71 25 4 0.165 Intron 14 1738-46 tcttAaaat tcttGaaat 24 52 24 0.500 3Ј-UTR 2332 cttcAgtct cttcTAgtct 86 14 0 0.070 2364 tgccAttat tgccCttat 99 1 0 0.005 2512 agaaCttac agaaTttac 99 1 0 0.005 R, reference allele; V, variant allele.
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ABCG2 p.Ser441Asn 15475413:112:1091
status: VERIFIED
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PMID: 15553238 [PubMed] Kondo C et al: "Functional analysis of SNPs variants of BCRP/ABCG2."
No. Sentence Comment
3 The cellular localization was identified using the wild type and seven different SNP variants of BCRP (V12M, Q141K, A149P, R163K, Q166E, P269S, and S441N BCRP) after transfection of their cDNAs in plasmid vector to LLC-PK1 cells.
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ABCG2 p.Ser441Asn 15553238:3:148
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6 Wild type and six different SNP variants of BCRP other than S441N BCRP were expressed on the apical membrane, whereas S441N BCRP showed intracellular localization.
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ABCG2 p.Ser441Asn 15553238:6:60
status: VERIFIED
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ABCG2 p.Ser441Asn 15553238:6:118
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7 The expression levels of Q141K and S441N BCRP proteins were significantly lower compared with the wild type and the other five variants.
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ABCG2 p.Ser441Asn 15553238:7:35
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10 These results suggest that Q141K SNPs may associate with a lower expression level, and S441N SNPs may affect both the expression level and cellular localization.
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ABCG2 p.Ser441Asn 15553238:10:87
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26 On analyzing the specimens from the 100 Japanese volunteers, 7 kinds of SNPs were identified for the BCRP gene: G34A (V12M), C376T (Q376Stop), C421A (Q141K), G1098A (E366E), G1322A (S441N), T1465C (F489L), and C1515- (AFFVM505-509ASSL Stop).
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ABCG2 p.Ser441Asn 15553238:26:182
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29 We constructed expression systems for the wild type and SNPs variants of BCRP (V12M, Q141K, A149P, R163K, Q166E, P269S, S441N BCRP) and examined whether these SNPs variants of BCRP alter its localization, expression level, and transport activity.
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ABCG2 p.Ser441Asn 15553238:29:120
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42 Using site-directed mutagenesis, SNP variants of BCRP (V12M, Q141K, A149P, R163K, Q166E, P269S and S441N BCRP) were constructed on pcDNA3.1 vector (SNPs type BCRP/pcDNA3.1).
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ABCG2 p.Ser441Asn 15553238:42:99
status: VERIFIED
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49 S441N BCRP was amplified with 5Ј-CCAACCAGTGTTTCAGCAAT- GTTTCAGCCGTGGAACTC-3Ј and 5Ј-GAGTTCCACG- GCTGAAACATTGCTGAAACACTGGTTGG-3Ј.
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ABCG2 p.Ser441Asn 15553238:49:0
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52 For SNPs type BCRPs, viruses were prepared in the same way, resulting in the production of pAd-SNPs BCRP (pAd-V12M, Q141K, A149P, R163K, Q166E, P269S, and S441N BCRP).
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ABCG2 p.Ser441Asn 15553238:52:155
status: VERIFIED
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91 In our experimental system, except for one SNP variant of BCRP (S441N BCRP/pcDNA3.1), all variants showed the same localization as the wild-type BCRP, at the apical membrane of LLC-PK1 cells (Fig. 1).
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ABCG2 p.Ser441Asn 15553238:91:64
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92 S441N BCRP was expressed intracellularly (Fig. 1).
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ABCG2 p.Ser441Asn 15553238:92:0
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97 Except for two BCRP variants (Q141K and S441N BCRP), the expression levels of each BCRP SNPs were approximately the same as that of the wild-type BCRP (Fig. 2).
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ABCG2 p.Ser441Asn 15553238:97:40
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98 The expression level of Q141K BCRP was approximately 30-40% of the wild-type BCRP, whereas that of S441N BCRP was much lower, and could not be determined with any accuracy (Fig. 2).
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ABCG2 p.Ser441Asn 15553238:98:99
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110 Except for two SNP variants of BCRP (Q141K and S441N BCRP), the ATP-dependent uptakes per mg membrane protein of SNP variants (V12M, A149P, R163K, Q166E, P269S BCRP) were similar to that of the wild-type BCRP (Fig. 3a).
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ABCG2 p.Ser441Asn 15553238:110:47
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111 The uptake activity of Q141K BCRP per mg membrane protein was approximately 30-40% of the wild-type BCRP, and that of S441N was almost the same as that of the GFP-infected control cells.
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ABCG2 p.Ser441Asn 15553238:111:118
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113 Then, in order to compare the intrinsic transport activity of the wild-type and SNP variants of BCRP, the uptake determined per mg membrane protein (Fig. 3a) was normalized relative to the expression levels estimated by Western blot analysis (Fig. 2), except for S441N BCRP the expression level of which was extremely low (Fig. 2).
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ABCG2 p.Ser441Asn 15553238:113:263
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120 Figure 5a shows the ATP-dependent uptake of DHEAS, PAH, and MTX per mg membrane protein for the wild-type and SNPs BCRP (V12M, Q141K, A149P, R163K, Q166E, P269S, and S441N BCRP).
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ABCG2 p.Ser441Asn 15553238:120:166
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121 Although Q141K BCRP exhibited a lower activity than wild type BCRP, no significant transport was observed for S441N BCRP (Fig. 5a).
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ABCG2 p.Ser441Asn 15553238:121:110
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127 The expression levels of wild type and S441N SNPs BCRP were also determined also in whole cell lysates.
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ABCG2 p.Ser441Asn 15553238:127:39
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142 As far as the cellular localization was concerned, S441N BCRP was the only variant which was expressed in the intracellular compartment.
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ABCG2 p.Ser441Asn 15553238:142:51
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143 We also found that the intracellular localization of S441N BCRP in HEK293 cells after transient expression (data not shown), whereas the wild-type BCRP was expressed on the cell membrane.
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ABCG2 p.Ser441Asn 15553238:143:53
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145 Western blot analysis revealed that the expression of S441N is significantly lower than the wild type BCRP.
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ABCG2 p.Ser441Asn 15553238:145:54
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184 Among the 100 Japanese specimens, S441N SNPs were only found in one heterozygous subject and, consequently, their allele frequency was calculated to be only 0.5%.
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ABCG2 p.Ser441Asn 15553238:184:34
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188 Since pheophorbide a is also transported by human BCRP (10), it is likely that Q141K and S441N SNPs may be involved in the phototoxicity and protoporphyria induced by the intake of chlorophyll.
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ABCG2 p.Ser441Asn 15553238:188:89
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190 These data suggest that the ability to protect stem cells from some genotoxic xenobiotics might be lower in subjects who have Q141K and S441N SNPs in BCRP gene.
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ABCG2 p.Ser441Asn 15553238:190:136
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197 Since BCRP also transports SN-38 (28), it is possible that subjects who have Q141K or S441N SNPs variants of BCRP are more sensitive to SN-38.
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ABCG2 p.Ser441Asn 15553238:197:86
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198 In conclusion, we have shown that two kinds of SNP variants of BCRP (Q141K and S441N BCRP) are associated with the reduced expression.
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ABCG2 p.Ser441Asn 15553238:198:79
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199 In particular, S441N variation is associated with the altered cellular localization.
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ABCG2 p.Ser441Asn 15553238:199:15
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PMID: 15743976 [PubMed] Vethanayagam RR et al: "Functional analysis of the human variants of breast cancer resistance protein: I206L, N590Y, and D620N."
No. Sentence Comment
220 Several other BCRP variants occurring at much lower allele frequencies (0.5-1%) such as A149P, R163K, Q166E, P269S, and S441N have also been characterized (Kondo et al., 2004).
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ABCG2 p.Ser441Asn 15743976:220:120
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221 Except for S441N, all of these BCRP variants showed protein expression, membrane localization, and transport function similar to those of wild-type protein (Kondo et al., 2004).
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ABCG2 p.Ser441Asn 15743976:221:11
status: VERIFIED
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222 S441N exhibited impaired membrane localization and lower protein expression, indicating that this variant may also affect disposition of BCRP substrates.
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ABCG2 p.Ser441Asn 15743976:222:0
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PMID: 16160819 [PubMed] Ishikawa T et al: "Pharmacogenomics of the human ABC transporter ABCG2: from functional evaluation to drug molecular design."
No. Sentence Comment
113 These contradictory expression and localization data for ABCG2 variants indicate that differences in transfection conditions (transient or stable expression), the copy number of cDNA incorporated in genomic DNA or other cellular determinants may variably Table 2 Frequencies of ABCG2 alleles in different ethnic groups Position Ethnic group Variant allele Allele Reference Amino acid cDNA N Hetero Homo Frequency (%) V12M c.34G>A Japanese 29 9 1 19.0 Imai et al. (2002) Japanese 10 - - 15.0 Zamber et al. (2003) Japanese 220 61 8 17.5 Kobayashi et al. (2005) Chinese 10 - - 20.0 Zamber et al. (2003) Southeast Asians 10 - - 45.0 Zamber et al. (2003) Pacific Islanders 7 - - 64.0 Zamber et al. (2003) Swedish 60 2 0 1.7 B¨ackstr¨om et al. (2003) Dutch 100 11 1 6.5 Bosch et al. (2005) Caucasian 86 - - 2.0 Zamber et al. (2003) Caucasian 150 27 2 10.3 Mizuarai et al. (2004) Caucasian 150 11 0 3.7 Kobayashi et al. (2005) Ashkenazi Jewish 10 - - 10.0 Zamber et al. (2003) Middle Eastern 20 - - 5.0 Zamber et al. (2003) Africans North of Sahara 7 - - 14.0 Zamber et al. (2003) African American 150 17 1 6.3 Kobayashi et al. (2005) Mexicans 10 - - 10.0 Zamber et al. (2003) Hispanic Livers 5 - - 40.0 Zamber et al. (2003) Mexican Indians 5 - - 90.0 Zamber et al. (2003) Q126Stop c.376C>T Japanese 124 3 0 1.2 Imai et al. (2002) Japanese 60 2 0 1.7 Itoda et al. (2003) Japanese 220 4 0 0.9 Kobayashi et al. (2005) Caucasian 150 0 0 0.0 Mizuarai et al. (2004) Caucasian 150 0 0 0.0 Kobayashi et al. (2005) African American 150 0 0 0.0 Kobayashi et al. (2005) Q141K c.421C>A Japanese 124 48 9 26.6 Imai et al. (2002) Japanese 10 - - 35.0 Zamber et al. (2003) Japanese 220 90 27 32.7 Kobayashi et al. (2005) Chinese 95 43 11 34.2 de Jong et al. (2004) Chinese 10 - - 35.0 Zamber et al. (2003) Southeast Asians 10 - - 15.0 Zamber et al. (2003) Pacific Islanders 7 - - 14.0 Zamber et al. (2003) Swedish 60 10 1 10.0 B¨ackstr¨om et al. (2003) Dutch 100 20 2 12.0 Bosch et al. (2005) Caucasian 85 - - 14.0 Zamber et al. (2003) Caucasian 172 33 3 11.3 de Jong et al. (2004) Caucasian 150 22 2 8.7 Mizuarai et al. (2004) Caucasian 150 25 4 11.0 Kobayashi et al. (2005) Ashkenazi Jewish 10 - - 5.0 Zamber et al. (2003) Middle Eastern 20 - - 13.0 Zamber et al. (2003) Africans North of Sahara 7 - - 0.0 Zamber et al. (2003) African, Sub-Saharan 938 14 1 0.9 de Jong et al. (2004) African American 24 - - 0.0 Zamber et al. (2003) African American 150 5 1 2.3 Kobayashi et al. (2005) African American 94 8 1 5.3 de Jong et al. (2004) Mexicans 10 - - 5.0 Zamber et al. (2003) Hispanic Livers 5 - - 10.0 Zamber et al. (2003) Mexican Indians 5 - - 10.0 Zamber et al. (2003) R160Q c.479G>A Dutch 100 1 0 0.5 Bosch et al. (2005) I206L c.616A>C Japanese 10 - - 0.0 Zamber et al. (2003) Chinese 10 - - 0.0 Zamber et al. (2003) Southeast Asians 10 - - 0.0 Zamber et al. (2003) Pacific Islanders 7 - - 0.0 Zamber et al. (2003) Caucasian 65 - - 0.0 Zamber et al. (2003) Table 2 Continued Position Ethnic group Variant allele Allele Reference Amino acid cDNA N Hetero Homo Frequency (%) Ashkenazi Jewish 10 - - 0.0 Zamber et al. (2003) Middle Eastern 20 - - 0.0 Zamber et al. (2003) Africans North of Sahara 7 - - 0.0 Zamber et al. (2003) African American 15 - - 0.0 Zamber et al. (2003) Mexicans 10 - - 0.0 Zamber et al. (2003) Hispanic Livers 5 - - 10.0 Zamber et al. (2003) Mexican Indians 5 - - 0.0 Zamber et al. (2003) F431L c.1291T>C Japanese 60 1 0 0.8 Itoda et al. (2003) S441N c.1322G>A Japanese 100 1 0 0.5 Kobayashi et al. (2005) F489L c.1465T>C Japanese 60 1 0 0.8 Itoda et al. (2003) Japanese 100 1 0 0.5 Kobayashi et al. (2005) R575Stop c.1723C>T Dutch 100 1 0 0.5 Bosch et al. (2005) N590Y c.1768A>T Caucasian 65 - - 1.0 Zamber et al. (2003) Caucasian 150 1 0 0.3 Mizuarai et al. (2004) African Americans 15 - - 0.0 Zamber et al. (2003) D620N c.1858G>A Dutch 100 1 0 0.5 Bosch et al. (2005) affect the cellular processing and sorting of these proteins.
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ABCG2 p.Ser441Asn 16160819:113:3475
status: VERIFIED
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PMID: 16259577 [PubMed] Sakurai A et al: "Genetic polymorphisms of ATP-binding cassette transporters ABCB1 and ABCG2: therapeutic implications."
No. Sentence Comment
210 In different ethnic groups, seven naturally-occurring non-synonymous SNPs have been reported: V12M, Q126Stop, Q141K, I206L, F431L, S441N, F489L, N590Y and D620N.
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ABCG2 p.Ser441Asn 16259577:210:131
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213 Some of the above sequence variations showed an allele frequency of ~ 1% in distinct populations, Q126stop and F489L in the Japanese and N590Y in the Caucasian population [129-131,134,135], whereas most of the mutations were only detected in single individuals (e.g., I206L, F431L, S441N, D620N).
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ABCG2 p.Ser441Asn 16259577:213:282
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225 Location Position Allele Amino acid Allele frequency in Caucasian populations Allele frequency in Japanese populatins Allele frequency in African populations n % n % n % Exon 2 34 G A 12 Val 12 Met 546 94.4 5.6 259 82.4 17.6 181 93.7 6.3 Exon 4 376 C T 126 Gln 126 stop 300 100 0 404 98.9 1.1 150 100 0 Exon 5 421 C A 141 Gln 141 Lys 717 89.0 11.0 354 69.4 30.6 1213 98.6 1.4 Exon 5 479 G A 160 Arg 160 Gln 100 99.5 0.5 ND ND ND ND ND ND Exon 11 1291 T C 431 Phe 431 Leu ND ND ND 60 99.2 0.8 ND ND ND Exon 11 1322 G A 441 Ser 441 Asn ND ND ND 100 99.5 0.5 ND ND ND Exon 12 1465 T C 489 Phe 489 Leu ND ND ND 160 99.4 0.6 ND ND ND Exon 14 1723 C T 575 Arg 575 stop 100 99.5 0.5 ND ND ND ND ND ND Exon 15 1768 A T 590 Asn 590 Tyr 215 99.5 0.5 ND ND ND 15 100 0 Exon 16 1858 T A 620 Asp 620 Asp 100 99.5 0.5 ND ND ND ND ND ND Data are from [129-135,137].
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ABCG2 p.Ser441Asn 16259577:225:522
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250 COOH H2N N590Y V12M G51C Q126stop Q141K T153M Q166E I206L F208S S248P E334stop F431L F489L D620N R482G R482T S441N F571I EXTRACELLULAR INTRACELLULAR R160Q R575stop ATP-binding site (transient or stable expression), the copy number of cDNA incorporated in genomic DNA or other cellular determinants may variably affect the cellular processing and sorting of these proteins.
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ABCG2 p.Ser441Asn 16259577:250:109
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PMID: 16337740 [PubMed] Cervenak J et al: "The role of the human ABCG2 multidrug transporter and its variants in cancer therapy and toxicology."
No. Sentence Comment
109 To date, altogether eight non-synonymous (V12M, Q141K, I206L, F431L, S441N, F489L, N590Y, D620N), five synonymous (silent) (c.114TOC, c.369COT, c.474COT, c.1098GOA, c.1425AOG) missense mutations, one nonsense (Q126X), and one frameshift (c.1515delC) mutations were identified in the coding region of ABCG2 in healthy individuals or in patients [43-46,49,63-65].
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ABCG2 p.Ser441Asn 16337740:109:69
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112 Some of the above sequence variations showed an allele frequency of about 1% in distinct populations (Q126X, F489L in the Japanese and N590Y in the Caucasian population [45-47,49,64]), while most of the mutations were only detected in single individuals (missense mutations: I206L, F431L, S441N, D620N, and a frameshift mutation: c.1515delC [44-46,49]).
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ABCG2 p.Ser441Asn 16337740:112:289
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147 In a recent study, similarly LLC-PKI cells where used to express the V12M and Q141K variants and additionally five other polymorphisms (A149P, R163K, Q166E, P269S and S441N [55]).
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ABCG2 p.Ser441Asn 16337740:147:167
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148 Interestingly, they found that all polymorphisms, including V12M and Q141K, had an apical localization, and only the S441N variant showed intracellular staining.
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ABCG2 p.Ser441Asn 16337740:148:117
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149 The impaired localization pattern of the S441N variant was accompanied by a poor expression level.
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ABCG2 p.Ser441Asn 16337740:149:41
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PMID: 16402910 [PubMed] Krishnamurthy P et al: "Role of ABCG2/BCRP in biology and medicine."
No. Sentence Comment
301 Three of these resulted in the amino acid substitutions F431L, F489L, and S441N.
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ABCG2 p.Ser441Asn 16402910:301:74
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302 Konda et al. extended these studies and suggested that the SNP resulting in the S441N substitution may affect the expression level and cellular localization of ABCG2 (152).
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ABCG2 p.Ser441Asn 16402910:302:80
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PMID: 16608919 [PubMed] Tamura A et al: "Functional validation of the genetic polymorphisms of human ATP-binding cassette (ABC) transporter ABCG2: identification of alleles that are defective in porphyrin transport."
No. Sentence Comment
2 In the present study, based on the currently available data on SNPs and acquired mutations, we have created a total of 18 variant forms of ABCG2 (V12M, G51C, Q126stop, Q141K, T153M, Q166E, I206L, F208S, S248P, E334stop, F431L, S441N, R482G, R482T, F489L, F571I, N590Y, and D620N) by site-directed mutagenesis and expressed them in insect cells.
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ABCG2 p.Ser441Asn 16608919:2:227
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4 We herein provide evidence that the variants Q126stop, F208S, S248P, E334stop, and S441N are defective in porphyrin transport, whereas F489L exhibited impaired transport, approximately 10% of the activity observed for the wild type.
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ABCG2 p.Ser441Asn 16608919:4:83
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6 Thus, among those genetic polymorphisms of ABCG2, at least the hitherto validated alleles of Q126stop, S441N, and F489L are suggested to be of clinical importance related to the potential risk of porphyria.
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ABCG2 p.Ser441Asn 16608919:6:103
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36 We herein provide evidence that the variants Q126stop, F208S, S248P, E334stop, S441N, and F489L are defective or impaired in the transport of porphyrins, suggesting that those genetic polymorphisms in the ABCG2 gene may be related to the risk of certain diseases resulting from disruption of porphyrin homeostasis.
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ABCG2 p.Ser441Asn 16608919:36:79
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82 GC indicates the percentage of guanine and cytosine contents in the PCR primer set. Tm shows the melting temperature (Tm) for each PCR primer set. Variant and Primers Primer Sequence (5Ј 3 3Ј) Primer Length GC Tm bases % °C V12M 33 39 55 Forward CGAAGTTTTTATCCCAATGTCACAAGGAAACAC Reverse GTGTTTCCTTGTGACATTGGGATAAAAACTTCG G51C 42 35 59 Forward ATCGAGTAAAACTGAAGAGTTGCTTTCTACCTTGTAGAAAAC Reverse GTTTTCGACAAGGTAGAAAGCAACTCTTCAGTTTTACTCGAT Q126stop 40 40 62 Forward GTAATTCAGGTTACGTGGTATAAGATGATGTTGTGATGGG Reverse CCCATCACAACATCATCTTATACCACGTAACCTGAATTAC Q141K 35 42 55 Forward CGGTGAGAGAAAACTTAAAGTTCTCAGCAGCTCTT Reverse AAGAGCTGCTGAGAACTTTAAGTTTTCTCTCACCG T153M 42 40 60 Forward CGGCTTGCAACAACTATGATGAATCATGAAAAAAACGAACGG Reverse CCGTTCGTTTTTTTCATGATTCATCATAGTTGTTGCAAGCCG Q166E 35 42 55 Forward GGATTAACAGGGTCATTGAAGAGTTAGGTCTGGAT Reverse ATCCAGACCTAACTCTTCAATGACCCTGTTAATCC I206L 36 44 59 Forward CTTATCACTGATCCTTCCCTCTTGTTCTTGGATGAG Reverse CTCATCCAAGAACAAGAGGGAAGGATCAGTGATAAG F208S 35 45 55 Forward TGATCCTTCCATCTTGTCCTTGGATGAGCCTACAA Reverse TTGTAGGCTCATCCAAGGACAAGATGGAAGGATCA S248P 35 40 55 Forward TTCATCAGCCTCGATATCCCATCTTCAAGTTGTTT Reverse AAACAACTTGAAGATGGGATATCGAGGCTGATGAA E334stop 35 31 55 Forward TCATAGAAAAATTAGCGTAGATTTATGTCAACTCC Reverse GGAGTTGACATAAATCTACGCTAATTTTTCTATGA F431L 28 60 62 Forward AGCTGGGGTTCTCCTCTTCCTGACGACC Reverse GGTCGTCAGGAAGAGGAGAACCCCAGCT S441N 34 47 59 Forward AACCAGTGTTTCAGCAATGTTTCAGCCGTGGAAC Reverse GTTCCACGGCTGAAACATTGCTGAAACACTGGTT F489L 46 34 62 Forward GAGGATGTTACCAAGTATTATACTTACCTGTATAGTGTACTTCATG Reverse CATGAAGTACACTATACAGGTAAGTATAATACTTGGTAACATCCTC F571I 36 47 61 Forward GTCATGGCTTCAGTACATCAGCATTCCACGATATGG Reverse CCATATCGTGGAATGCTGATGTACTGAAGCCATGAC N590Y 42 38 62 Forward CATAATGAATTTTTGGGACAATACTTCTGCCCAGGACTCAAT Reverse ATTGAGTCCTGGGCAGAAGTATTGTCCCAAAAATTCATTATG D620N 32 56 62 Forward GGTAAAGCAGGGCATCAATCTCTCACCCTGGG Reverse CCCAGGGTGAGAGATTGATGCCCTGCTTTACC veloped by using Western Lighting Chemiluminescent Reagent Plus (PerkinElmer Life and Analytical Sciences, Boston, MA) and detected by Lumino Imaging Analyzer FAS-1000 (Toyobo Engineering, Osaka, Japan).
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ABCG2 p.Ser441Asn 16608919:82:1400
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144 For this purpose, based on the currently available data on SNPs and acquired mutations, we generated variant forms (i.e., V12M, G51C, Q126stop, Q141K, T153M, Q166E, I206L, F208S, S248P, E334stop, F431L, S441N, R482G, R482T, F489L, F571I, N590Y, and D620N) by site-directed mutagenesis.
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ABCG2 p.Ser441Asn 16608919:144:203
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164 It is important to note that the variants Q126stop, F208S, S248P, E334stop, and S441N substantially lack transport activity for both hematoporphyrin and methotrexate.
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ABCG2 p.Ser441Asn 16608919:164:80
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177 as the variants F208S, S248P, S441N, F431L, and F489L were expressed in Flp-In 293 cells.
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ABCG2 p.Ser441Asn 16608919:177:30
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179 Flp-In-293 cells expressing S441N were photosensitive (Fig. 6), suggesting that the S441N variant could not extrude pheophorbide a from cells, which lead them to become photosensitive.
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ABCG2 p.Ser441Asn 16608919:179:28
status: VERIFIED
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ABCG2 p.Ser441Asn 16608919:179:84
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184 To gain more insight into the association of ABCG2 variants with cellular resistance to anticancer drugs, we incubated Flp-In-293 cells expressing ABCG2 WT, F431L, S441N, or F489L in the presence of SN-38, mitoxantrone, doxorubicin, or daunorubicin at different concentrations as described under Materials and Methods. Table 3 summarizes the drug resistance profile of those variants-expressing cells.
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ABCG2 p.Ser441Asn 16608919:184:164
status: VERIFIED
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185 Both Flp-In-293/ABCG2 (WT) and Flp-In-293/ABCG2 (F431L) cells were resistant toward SN-38 and mitoxantrone, whereas the resistance ratio of Flp-In-293/ABCG2 (S441N) and Flp-In-293/ABCG2 (F489L) cells were much lower, being close to that of Flp-In-293/Mock cells.
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ABCG2 p.Ser441Asn 16608919:185:158
status: VERIFIED
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186 None of the SNP variants of F431L, S441N, and F489L conferred Flp-In-293 cells resistance to doxorubicin or daunorubicin (Table 3), being different from the acquired mutants of R482G and R482T (Yoshikawa et al., 2004).
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ABCG2 p.Ser441Asn 16608919:186:35
status: VERIFIED
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203 Photosensitivity of Flp-In-293 cells expressing ABCG2 WT, F431L, S441N, or F489L.
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ABCG2 p.Ser441Asn 16608919:203:65
status: VERIFIED
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214 In the present study, based on the currently available data on SNPs and acquired mutations, we have created a total of 18 variant forms of ABCG2 (V12M, G51C, Q126stop, Q141K, T153M, Q166E, I206L, F208S, S248P, E334stop, F431L, S441N, R482G, R482T, F489L, F571I, N590Y, and D620N) by site-directed mutagenesis and expressed them in insect cells.
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ABCG2 p.Ser441Asn 16608919:214:227
status: VERIFIED
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215 We provide evidence that the variants Q126stop, F208S, S248P, E334stop, and S441N are defective in the transport of hematoporphyrin (Fig. 5).
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ABCG2 p.Ser441Asn 16608919:215:76
status: VERIFIED
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217 Flp-In-293 cells expressing the F208S, S248P, S441N, and F489L variants were sensitive to light when cells were treated with pheophorbide a. Thus, it is likely that humans with these alleles may be more susceptible to porphyrin-induced phototoxicity.
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ABCG2 p.Ser441Asn 16608919:217:46
status: VERIFIED
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219 The frequencies of the Q126stop, S441N, and F489L alleles are relatively low (less than 2%) compared with those of the V12M and Q141K alleles.
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ABCG2 p.Ser441Asn 16608919:219:33
status: VERIFIED
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224 Potential Risk Amino Acid Transport Allele Frequency cDNA Position Located on Exon Allele Data Sourcea Hemato MTX Wild-Type Allele % V12M ϩϩ ϩϩ 2.0-90.0 34 2 G A 1, 2, 4, 5, 7, 8 ૽૽ Q126stop - - 0.0-1.7 376 4 C T 1, 3, 5, 7 Q141K ϩϩ ϩϩ 0.0-35.5 421 5 C A 1, 2, 4, 5, 6, 7, 8 T153M ϩϩ ϩϩ 3.3 458 5 C T 5 R160Q N.D. N.D. 0.5 479 5 G A 8 Q166E ϩϩ ϩϩ N.D. 496 5 C G NCBI dbSNP rs1061017 I206L ϩϩ ϩϩ 10.0 616 6 A C 2 ૽૽ F208S - - N.D. 623 6 T C NCBI dbSNP rs1061018 ૽૽ S248P - - N.D. 742 7 T C NCBI dbSNP rs3116448 ૽૽ E334stop - - N.D. 1000 9 G T NCBI dbSNP rs3201997 F431L ϩϩ - 0.8 1291 11 T C 3 ૽૽ S441N - - 0.5 1322 11 G A 7 ૽ F489L ϩ - 0.5-0.8 1465 12 T C 3, 7 F571L ϩϩ ϩϩ 0.5 1711 14 T A NCBI dbSNP rs9282571 (૽૽) R575stop N.D. N.D. 0.5 1723 14 C T 8 N590Y ϩϩ ϩϩ 0.0-1.0 1768 15 A T 2, 5 D620N ϩϩ ϩϩ 0.5 1858 16 G A 8 Hemato, hematoporphyrin; NCBI, National Center for Biotechnology Information; N.D., not determined; ૽, risk of porphyria; (૽), potential risk is assumed as the lack of transport activity being as a result of a truncated protein.
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ABCG2 p.Ser441Asn 16608919:224:787
status: VERIFIED
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227 TABLE 3 Drug resistance profiles of ABCG2 WT and variants The drug resistance profiles of ABCG2 WT and variants were obtained by incubating Flp-In-293/ABCG2 WT, F431L, S441N, or F489L cells in the presence of SN-38, mitoxantrone, doxorubicin, or daunorubicin at different concentrations (0-100 ␮M) as described under Materials and Methods.
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ABCG2 p.Ser441Asn 16608919:227:168
status: VERIFIED
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233 Anticancer Drug IC50 and Drug Resistance Ratio Mock WT F431L S441N F489L nM (-fold) SN-38 0.9 Ϯ 0.1 (1.0) 42.1 Ϯ 3.1 (46.8)* 11.5 Ϯ 0.9 (12.7)* 0.7 Ϯ 0.1 (0.8) 3.1 Ϯ 0.3 (3.4) Mitoxantrone 5.2 Ϯ 0.3 (1.0) 99.8 Ϯ 4.5 (19.2)* 20.3 Ϯ 1.9 (4.4)* 4.6 Ϯ 0.5 (0.9) 11.5 Ϯ 0.4 (2.2) Doxorubicin 32.0 Ϯ 0.6 (1.0) 48.1 Ϯ 2.0 (1.5) 39.0 Ϯ 3.5 (1.2) 20.3 Ϯ 1.9 (0.6) 44.6 Ϯ 3.9 (1.4) Daunorubicin 9.5 Ϯ 1.2 (1.0) 17.8 Ϯ 3.9 (1.8) 14.1 Ϯ 0.5 (1.5) 12.1 Ϯ 0.2 (1.3) 16.3 Ϯ 0.9 (1.7) *P Ͻ 0.01.
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ABCG2 p.Ser441Asn 16608919:233:61
status: VERIFIED
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240 Therefore, at least, the validated alleles such as Q126stop, S441N, and F489L with a loss of porphyrin transport activity are at potential risk of diseases.
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ABCG2 p.Ser441Asn 16608919:240:61
status: VERIFIED
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244 As exemplified by the S441N variant of ABCG2, amino acid substitution at the 441 site caused dramatic changes in the substrate specificity of ABCG2 (Fig. 5).
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ABCG2 p.Ser441Asn 16608919:244:22
status: VERIFIED
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245 To be precise, the S441N variant completely lost transport activity for both hematoporphyrin and methotrexate (Fig. 5).
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ABCG2 p.Ser441Asn 16608919:245:19
status: VERIFIED
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PMID: 16702730 [PubMed] Maekawa K et al: "Genetic variation and haplotype structure of the ABC transporter gene ABCG2 in a Japanese population."
No. Sentence Comment
85 115Haplotype Structure in Human ABCG2 (from |1836 to |1175 bp upstream of the translational start site) of the basal promoter,30) and was suggested to in‰uence irinotecan pharmacokinetics.31) The frequencies of two well-known nonsynonymous SNPs, 34GÀA (Val12Met) and 421CÀA (Gln141Lys), were 0.192 and 0.319 in our study, which were comparable to those in Chinese (0.204 and 0.222–0.350, respectively).20,27) However, the frequencies were much higher than those in Caucasians (0.02–0.065 and 0.08–0.15), African-Americans (0–0.09 and 0–0.05), and a Swedish population (0.02 and 0.1).18,19,21,23,27) Of other relatively rare nonsynonymous SNPs, 376CÀT (Gln126X), 1291TÀC (Phe431Leu), 1322GÀA (Ser441Asn), 1465TÀC (Phe489Leu), and 1515delC (Phe506SerfsX4) were already detected in a Japanese population by Itoda et al.17) andWor Kobayashi et al.,23) but not found in other ethnic groups.
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ABCG2 p.Ser441Asn 16702730:85:747
status: VERIFIED
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100 Because the two rare nonsynonymous variations, 1515delC (F506SfsX4) and 1322GÀA (Ser441Asn), were found in the same patient, they were statistically estimated to be linked with each other.
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ABCG2 p.Ser441Asn 16702730:100:86
status: VERIFIED
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141 The thick lines represent the combinations with frequencies over 10z, and the thin lines represent the combinations with frequencies of 1.0 to 9.9z. 118 Keiko MAEKAWA et al. haplotype harboring nonsynonymous SNPs, 1465TÀC (Phe489Leu) (*2), 1291TÀC (Phe431Leu) (*3), 1322GÀA (Ser441Asn)W1515delC (Phe506SerfsX) (*4), and 1723CÀT (Arg575X) (*5), respectively.
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ABCG2 p.Ser441Asn 16702730:141:290
status: VERIFIED
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155 These results are inconsistent with those obtained by Mizuarai et al. and Morisaki et al., in which the reduced drug resistance was not caused by the decreased protein expression.25,26) Kondo et al. have shown that the Ser441Asn variant was not localized to apical membranes, but remains intracellular in the transfected LLC-PK1 cells,24) suggesting its reduced activity.
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ABCG2 p.Ser441Asn 16702730:155:219
status: VERIFIED
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PMID: 16766035 [PubMed] Cascorbi I et al: "Role of pharmacogenetics of ATP-binding cassette transporters in the pharmacokinetics of drugs."
No. Sentence Comment
919 0.015 Exon 11 c. 1322 G>A S441N 0.005 IVS 11 1367 A>G ?
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ABCG2 p.Ser441Asn 16766035:919:26
status: NEW
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PMID: 16877258 [PubMed] Wakabayashi K et al: "Human ABC transporter ABCG2 in xenobiotic protection and redox biology."
No. Sentence Comment
176 Based on the currently available data on SNPs and acquired mutations, we have created a total of 18 variant forms of ABCG2 (V12M, G51C, Q126stop, Q141K, T153M, Q166E, I206L, F208S, S248P, E334stop, F431L, S441N, R482G, R482T, F489L, F571I, N590Y, and D620N) by site-directed mutagenesis and expressed them in Sf9 insect cells.
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ABCG2 p.Ser441Asn 16877258:176:205
status: VERIFIED
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177 The variants Q126stop, F208S, S248P, E334stop, and S441N were found to be defective in the transport of hematoporphyrin (Tamura et al., 2006) (Table 2).
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ABCG2 p.Ser441Asn 16877258:177:51
status: VERIFIED
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179 Flp-In-293 cells expressing the F208S, S248P, S441N, and F489L variants were sensitive to light when those cells were treated with pheophorbide a (Tamura et al., 2006).
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ABCG2 p.Ser441Asn 16877258:179:46
status: VERIFIED
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PMID: 17015488 [PubMed] Sarkadi B et al: "Human multidrug resistance ABCB and ABCG transporters: participation in a chemoimmunity defense system."
No. Sentence Comment
997 In healthy individuals or patients, altogether eight nonsynonymous (V12M, Q141K, I206L, F431L, S441N, F489L, N590Y, D620N), five synonymous (silent) (c.
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ABCG2 p.Ser441Asn 17015488:997:95
status: VERIFIED
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PMID: 17093005 [PubMed] Enokizono J et al: "Involvement of breast cancer resistance protein (BCRP/ABCG2) in the biliary excretion and intestinal efflux of troglitazone sulfate, the major metabolite of troglitazone with a cholestatic effect."
No. Sentence Comment
192 BCRP has some functional single nucleotide polymorphisms (SNP), such as C376T (Q126stop), C421A (Q141K), and G1322A (S441N).
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ABCG2 p.Ser441Asn 17093005:192:117
status: NEW
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PMID: 17228519 [PubMed] Tamura A et al: "Genetic polymorphisms of human ABC transporter ABCG2: development of the standard method for functional validation of SNPs by using the Flp recombinase system."
No. Sentence Comment
4 While mRNAs of those integrated ABCG2 variants and wild type were evenly expressed in Flp-In-293 cells, the protein expression levels of F208S and S441N variants were found to be markedly low.
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ABCG2 p.Ser441Asn 17228519:4:147
status: VERIFIED
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48 Standard method for functional validation of ABCG2 SNPs Journal of Experimental Therapeutics and Oncology Vol. 6 2006 3 Plasma Membrane inside outside S S S homodimer A B CH2N COOH V12M Q141K F208S S248P F431L S441N F489L R482G R482T Acquired mutation Figure 1.
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ABCG2 p.Ser441Asn 17228519:48:210
status: VERIFIED
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67 PCR primers and conditions for site-directed mutagenesis to create variants of ABCG2 Variant Forward/Reverse Primer sequence (5` →→ 3`) Primer length % GC Tm (ºC) (F/R) primers (bases) V12M F CGAAGTTTTTATCCCAATGTCACAAGGAAACAC 33 39 55 R GTGTTTCCTTGTGACATTGGGATAAAAACTTCG Q141K F CGGTGAGAGAAAACTTAAAGTTCTCAGCAGCTCTT 35 42 55 R AAGAGCTGCTGAGAACTTTAAGTTTTCTCTCACCG F208S F TGATCCTTCCATCTTGTCCTTGGATGAGCCTACAA 35 45 55 R TTGTAGGCTCATCCAAGGACAAGATGGAAGGATCA S248P F TTCATCAGCCTCGATATCCCATCTTCAAGTTGTTT 35 40 55 R AAACAACTTGAAGATGGGATATCGAGGCTGATGAA F431L F AGCTGGGGTTCTCCTCTTCCTGACGACC 28 60 62 R GGTCGTCAGGAAGAGGAGAACCCCAGCT S441N F AACCAGTGTTTCAGCAATGTTTCAGCCGTGGAAC 34 47 59 R GTTCCACGGCTGAAACATTGCTGAAACACTGGTT F489L F GAGGATGTTACCAAGTATTATACTTACCTGTATAGTGTACTTCATG 46 34 62 R CATGAAGTACACTATACAGGTAAGTATAATACTTGGTAACATCCTC Sites of mutagenesis are indicated by underbars.
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ABCG2 p.Ser441Asn 17228519:67:640
status: VERIFIED
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104 Standard method for functional validation of ABCG2 SNPs Journal of Experimental Therapeutics and Oncology Vol. 6 2006 0 1 2 RelativemRNAlevel Mock WT V12M Q141K mRNA A ABCG2 GAPDH Mock WT F208S S248P F431L S441N F489L ABCG2 GAPDH 0 1 2 RelativemRNAlevel mRNA B GAPDH ABCG2 Mock WT F208S S248P F431L S441N F489L Protein 0 1 2 Relativeproteinlevel * * * C DProtein GAPDH ABCG2 0 1 2 Relativeproteinlevel * * Mock WT V12M Q141K Figure 3. mRNA and protein expression levels of ABCG2 WT and variants expressed in Flp-In-293 cells.
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ABCG2 p.Ser441Asn 17228519:104:207
status: VERIFIED
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ABCG2 p.Ser441Asn 17228519:104:300
status: VERIFIED
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114 Characterization of V12M, Q141K, F208S, S248P, F431L, S441N, and F489L variants expressed in Flp-In-293 cells The mRNA levels of ABCG2 and GAPDH were measured by quantitative PCR, and the ratios of ABCG2 variants vs. GAPDH were plotted.
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ABCG2 p.Ser441Asn 17228519:114:54
status: VERIFIED
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119 Figure 3 demonstrates mRNA and protein levels of ABCG2 WT and V12M, Q141K, F208S, S248P, F431L, S441N, and F489L variants expressed in Flp-In-293 cells.
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ABCG2 p.Ser441Asn 17228519:119:96
status: VERIFIED
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122 Interestingly, expression levels of the F208S and S441N variants were markedly low (Fig. 3D).
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ABCG2 p.Ser441Asn 17228519:122:50
status: VERIFIED
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123 The immunofluorescence images of Flp-In-293/ABCG2 (F208S) and Flp-In-293/ABCG2 (S441N) cells revealed that those variant proteins were not expressed in the plasma membrane (data not shown).
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ABCG2 p.Ser441Asn 17228519:123:80
status: VERIFIED
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132 Figure 4 summarizes the characteristics of those Tamura et al. 8 Journal of Experimental Therapeutics and Oncology Vol. 6 2006 Class Class Class Class WT V12M Q141K F431L S248P F489L F208S S441N R482G R482T Protein expression + + + + + + - - + + SN-38 resistance + + + + + / - - - - + + MX resistance + + + + / - - - - - + + Doxorubicin resistance - - - - - - - - + + Daunorubicin resistance - - - - - - - - + + Figure 4.
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ABCG2 p.Ser441Asn 17228519:132:189
status: VERIFIED
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140 Both F208S and S441N belong to the third class where protein expression levels were extremely low (Fig. 3D).
X
ABCG2 p.Ser441Asn 17228519:140:15
status: VERIFIED
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142 Finally, the acquired mutants R482G and R482T form another group, which is characteristic Standard method for functional validation of ABCG2 SNPs Journal of Experimental Therapeutics and Oncology Vol. 6 2006 9 Table 3 Remarks mRNA Protein Author Ref Host cell Vector Expression SNP expression expression Imai et al. (15) PA317 pHaL-IRES-DHFR bicistronic Stable V12M Similar to WT Similar to WT - - retrovirus vector plasmid - Q141K Similar to WT Lower than WT Mizuarai et al. (18) LLC-PK1 pcDNA3.1(+) Stable V12M Similar to WT N.D. - - - - Q141K Similar to WT N.D. Morisaki et al. (25) HEK293 pcDNA3.1 Stable V12M Vary among clones Vary among clones - - - - Q141K Vary among clones Vary among clones - - - - D620N Vary among clones Vary among clones Kondo et al. (26) LLC-PK1/ pcDNA3.1/ Stable/ V12M N.D. Similar to WT - HEK293 Adenovirus Transient Q141K N.D. 30 - 40% of WT - - - - A149P N.D. Similar to WT - - - - R163K N.D. Similar to WT - - - - Q166E N.D. Similar to WT - - - - P269S N.D. Similar to WT - - - - S441N N.D. Lower than WT Vethanayagam (27) HEK293 pcDNA3.1/myc-His(-) Stable I206L N.D. Vary among clones et al. - - - - N590Y N.D. Vary among clones - - - - D620N N.D. Vary among clones N.D.: No data Table 2.
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ABCG2 p.Ser441Asn 17228519:142:1015
status: VERIFIED
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143 Resistance profile (IC50 ) of ABCG2 Compounds IC50 (nM) Mock WT V12M Q141K F208S S248P F431L S441N F489L SN-38 1.0 ± 0.2 49.9 ± 6.0 51.1 ± 13.8 17.7 ± 0.9 0.7 ± 0.0 3.6 ± 0.4 12.1 ± 1.5 0.8 ± 0.0 3.9 ± 0.4 (49.9)* (51.1)* (17.7)* (0.7) (3.6) (12.1)* (0.8) (3.9) Mitoxantorone 7.0 ± 1.1 108.0 ± 4.9 94.0 ± 18.6 46.7 ± 12.7 5.1 ± 1.0 13.4 ± 1.3 15.2 ± 1.4 5.7 ± 0.8 12.1 ± 6.2 (15.4)* (13.4)* (6.7)* (0.7) (1.9) (2.2)* (0.8) (1.7) Doxorubicin 38.8 ± 3.8 105.2 ± 24.9 123.6 ± 35.3 156.8 ± 27.5 19.9 ± 8.7 23.7 ± 6.7 43.5 ± 6.1 39.4 ± 4.1 47.6 ± 3.1 (2.7) (3.2) (4.0) (0.5) (0.6) (1.1) (1.0) (1.2) Daounorubicin 13.0 ± 0.6 32.3 ± 6.5 58.2 ± 5.0 57.7 ± 4.1 14.1 ± 2.3 22.1 ± 4.2 15.9 ± 1.2 13.3 ± 1.1 23.6 ± 1.6 (2.5) (4.5) (4.4) (1.1) (1.7) (1.2) (1.0) (1.8) Etoposide 117.1 ± 16.0 210.2 ± 18.4 297.3 ± 58.5 233.9 ± 54.2 122.9 ± 17.6 137.7 ± 14.8 139.1 ± 12.3 154.3 ± 8.5 186.9 ± 10.1 (1.8) (2.5) (2.0) (1.0) (1.2) (1.2) (1.3) (1.6) Vincristine 1.8 ± 0.2 4.3 ± 0.3 7.1 ± 1.4 5.6 ± 1.6 0.6 ± 0.0 4.3 ± 0.9 1.8 ± 0.3 0.9 ± 0.1 3.0 ± 0.7 (2.4) (3.0) (3.1) (0.3) (2.4) (1.0) (0.5) (1.7) The drug resistance profiles of ABCG2 WT and variants were obtained by incubating Flp-In-293/ABCG2 WT, V12M, Q141K, F208S, S248P, F431L, S441N, or F489L cells in the presence of SN-38, mitoxantrone, doxorubicin, daunorubicin, etoposide, or vincristine at different concentrations as described in Materials and Methods.
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ABCG2 p.Ser441Asn 17228519:143:93
status: VERIFIED
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ABCG2 p.Ser441Asn 17228519:143:1486
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PMID: 17237154 [PubMed] Lee SS et al: "Identification and functional assessment of BCRP polymorphisms in a Korean population."
No. Sentence Comment
155 Recently, Kondo et al. (2004) reported the identification of several BCRP variants, which include A149P, R163K, Q166E, P269S, and S441N, in human cell lines.
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ABCG2 p.Ser441Asn 17237154:155:130
status: VERIFIED
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PMID: 17297656 [PubMed] Tamura A et al: "Re-evaluation and functional classification of non-synonymous single nucleotide polymorphisms of the human ATP-binding cassette transporter ABCG2."
No. Sentence Comment
3 To re-evaluate the effect of single nucleotide polymorphisms (SNP) of ABCG2 in vitro, we created a total of seven variant cDNAs (V12M, Q141K, F208S, S248P, F431L, S441N and F489L) by site-directed mutagenesis and stably expressed each of them in Flp-In-293 cells using the Flp recombinase system.
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ABCG2 p.Ser441Asn 17297656:3:163
status: VERIFIED
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6 In particular, expression of the F208S and S441N variants was markedly low, suggesting the instability of these variant proteins.
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ABCG2 p.Ser441Asn 17297656:6:43
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8 The contributions of the minor SNP variants (F208S, S248P, F431L, S441N and F489L) to drug resistance toward SN-38, mitoxantrone, doxorubicin, daunorubicin or etoposide were significantly lower than wild type.
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ABCG2 p.Ser441Asn 17297656:8:66
status: VERIFIED
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137 Characterization of the F208S, S248P, F431L, S441N and F489L variants expressed in Flp-In-293 cells.
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ABCG2 p.Ser441Asn 17297656:137:45
status: VERIFIED
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138 Figure 2C demonstrates the mRNA and protein levels of WT ABCG2 and the F208S, S248P, F431L, S441N and F489L variants expressed in Flp-In-293 cells.
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ABCG2 p.Ser441Asn 17297656:138:92
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139 Whereas mRNA levels were almost the same in WT and those variants, the protein levels of the F208S and S441N variants were markedly low.
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ABCG2 p.Ser441Asn 17297656:139:103
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140 The immunofluorescence images of Flp-In-293/ABCG2 (F208S) and Flp-In-293/ABCG2 (S441N) cells revealed that those variant proteins were not expressed in the plasma membrane (Fig. 2D).
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ABCG2 p.Ser441Asn 17297656:140:80
status: VERIFIED
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141 The S441N variant appeared to remain in the intracellular space.
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ABCG2 p.Ser441Asn 17297656:141:4
status: VERIFIED
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145 Cells transfected with F 208S or S441N did not exhibit any resistance to SN-38 ormitoxantrone; their cell survival curves were very similar to that of Flp-In-293/Mock cells.
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ABCG2 p.Ser441Asn 17297656:145:33
status: VERIFIED
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176 Resistance profile (IC50) of ABCG2 Compound IC50 (nM) Mock Wild type V12M Q141K F208S S248P F431L S441N F489L SN-38 0.9 40.0 (44.4) 40.0 (44.4) 17.0 (18.9) 0.6 (0.7) 3.0 (3.3) 10.0 (11.1) 0.7 (0.8) 3.1 (3.4) Mitoxantorone 5.2 >100 (>19) 92.0 (17.7) 45.0 (8.7) 4.5 (0.9) 11.0 (2.1) 21.0 (4.0) 4.6 (0.9) 11.0 (2.1) Doxorubicin 32.0 78.0 (2.4) 100.0 (3.1) 110.0 (3.4) 20.0 (0.6) 20.0 (0.6) 40.0 (1.3) 21.0 (0.7) 45.0 (1.4) Daunorubicin 12.0 30.0 (2.5) 50.0 (4.2) 50.0 (4.2) 12.0 (1.0) 21.0 (1.8) 14.0 (1.2) 12.0 (1.0) 19.0 (1.6) Etoposide 110.0 200.0 (1.8) 220.0 (2.0) 200.0 (1.8) 110.0 (1.0) 120.0 (1.1) 120.0 (1.1) 130.0 (1.2) 170.0 (1.5) Vincristine 1.4 4.0 (2.9) 5.0 (3.6) 4.5 (3.2) 0.6 (0.4) 4.0 (2.9) 1.4 (1.0) 0.8 (0.6) 2.8 (2.0) Relative resistances to mock cells are described in parentheses.
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ABCG2 p.Ser441Asn 17297656:176:98
status: VERIFIED
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192 As clearly demonstrated in this study, the F208S, S248P, F431L, S441N and F489L variants exhibited greatly altered protein expression levels (Fig. 2C) or drug resistance profiles (Fig. 4 and Table 1).
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ABCG2 p.Ser441Asn 17297656:192:64
status: VERIFIED
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193 In particular, expression levels of the F208S and S441N variants were markedly low (Fig. 2C).
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ABCG2 p.Ser441Asn 17297656:193:50
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202 As one of the specific aims of the present study, we functionally classified the non-synonymous polymorphisms (V12M, Q141K, F208S, S248P, F431L, S441N and F489L) in terms of their protein expression level, drug resistance profile and prazosin-stimulated ATPase activity.
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ABCG2 p.Ser441Asn 17297656:202:145
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207 Drug resistance profiles of Flp-In-293 cells expressing the wild-type (WT) BCRP/MXR1/ABCP (ABCG2), F208S, S248P, F431L, S441N or F489L variants toward (A) SN-38 and (B) mitoxantrone.
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ABCG2 p.Ser441Asn 17297656:207:120
status: VERIFIED
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214 (16) Both F208S and S441N belong to the third group where protein expression levels were extremely low (Fig. 2C).
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ABCG2 p.Ser441Asn 17297656:214:20
status: VERIFIED
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PMID: 17403009 [PubMed] Duncan EJ et al: "Cloning, mapping and association studies of the ovine ABCG2 gene with facial eczema disease in sheep."
No. Sentence Comment
95 The Q141K mutation affects the transport efficiency of the protein (Mizuarai et al. 2004), whereas the S441N mutation is known to alter the localisation of the mature protein from the cell membrane to an intracellular location.
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ABCG2 p.Ser441Asn 17403009:95:103
status: VERIFIED
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PMID: 17504223 [PubMed] Xia CQ et al: "Evaluation of drug-transporter interactions using in vitro and in vivo models."
No. Sentence Comment
119 The function of seven single nucleotide polymorphisms (SNPs) in BCRP (V12M, Q141K, A149P, R163K, Q166E, P269S, and S441N BCRP) was determined using membrane vesicles from HEK293 cells infected with the recombinant adenoviruses containing the corresponding BCRP cDNAs [45].
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ABCG2 p.Ser441Asn 17504223:119:115
status: VERIFIED
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120 The expression levels of Q141K and S441N BCRP proteins were significantly lower compared to the wild type protein and the other five variants.
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ABCG2 p.Ser441Asn 17504223:120:35
status: VERIFIED
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122 These results suggest that Q141K SNPs may be associated with a lower expression level, and S441N SNPs may affect both the expression level and cellular localization.
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ABCG2 p.Ser441Asn 17504223:122:91
status: VERIFIED
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PMID: 18154452 [PubMed] Sharom FJ et al: "ABC multidrug transporters: structure, function and role in chemoresistance."
No. Sentence Comment
357 In a study of six different SNP variants, the C421A polymorphism (nonsynonymous, Q141K) was expressed at lower levels, and the S441N variant had both lower expression and altered localization [171].
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ABCG2 p.Ser441Asn 18154452:357:127
status: NEW
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368 A recent study characterized the activity of 18 ABCG2 variants, and concluded that Q126stop, F208S, S248P, E334stop, S441N and F489L are defective in hematoporphyrin transport [170], which may increase the risk of disease in individuals carrying these polymorphisms.
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ABCG2 p.Ser441Asn 18154452:368:117
status: NEW
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PMID: 18159130 [PubMed] Tamura A et al: "In vitro evaluation of photosensitivity risk related to genetic polymorphisms of human ABC transporter ABCG2 and inhibition by drugs."
No. Sentence Comment
8 In the present study, we expressed ABCG2 genetic variants, i.e., V12M, Q141K, S441N, and F489L, as well as the wild type (WT) in Flp-In-293 cells to examine the hypothesis.
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ABCG2 p.Ser441Asn 18159130:8:78
status: VERIFIED
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9 Cells expressing S441N and F489L variants exhibited high levels of both cellularly accumulated pheophorbide a and photosensitivity, when those cells were incubated with pheophorbide a and irradiated with visible light.
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ABCG2 p.Ser441Asn 18159130:9:17
status: VERIFIED
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22 By using plasma membrane vesicles and a high-speed screening system, we precisely evaluated functional changes associated with genetic polymorphisms in vitro.24) Since porphyrins are considered to be endogenous substrates for ABCG2, we have investigated the transport of porphyrins with a total of 18 variant forms of human ABCG2 in the plasma membrane vesicle system.4) As a result, we found that the variants Q126stop, F208S, S248P, E334stop, S441N, and F489L are defective or impaired in the transport of porphyrins.
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ABCG2 p.Ser441Asn 18159130:22:445
status: VERIFIED
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98 Genetic polymorphisms of human ABCG2 and pheophorbide a-photosensitivity In vitro experiments SNP data IC50 (mM) Photosensitivity ratio (fold) Ethnic group N Allele frequency (z) Reference WT 3.0 1.0 - - - - V12M 4.1 0.7 Caucasian 546 5.6 22, 13, 21, 20, 14 Japanese 259 17.6 18, 22, 20 African 181 6.3 22, 20 Q141K 2.9 1.0 Caucasian 717 11.0 22, 13, 21, 15, 20, 14 Japanese 354 30.6 18, 22, 20 African 1213 1.4 22, 15, 14 S441N 0.5 6.0 Japanese 100 0.5 20 F489L 1.7 1.8 Japanese 160 0.6 19, 20 Pheophorbide a-photosensitivity ratios and IC50 values were determined from the data shown in Fig. 2B. 432 Ai TAMURA, et al. a Fluoroskan Ascent FL (Thermo Labsystems, Helsinki, Finland) (excitation at 405 nm; emission at 612 nm).
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ABCG2 p.Ser441Asn 18159130:98:423
status: VERIFIED
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99 Results Expression of ABCG2 WT and SNP variants in Flp-In-293 cells: In the present study, we aimed to examine the impact of hitherto reported major SNPs (V12M, Q141K, S441N, or F489L) on the photo-sensitivity.
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ABCG2 p.Ser441Asn 18159130:99:168
status: VERIFIED
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107 Namely, the protein expression level of the S441N variant was markedly low (Fig. 1A).
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ABCG2 p.Ser441Asn 18159130:107:44
status: VERIFIED
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110 Figure 1B depicts the immuno‰uorescence images of Flp-In-293 cells expressing ABCG2 WT and those SNP variants (i.e., V12M, Q141K, S441N, and F489L) as well as mock vector-transfected cells (Flp-In-293/ Mock).
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ABCG2 p.Ser441Asn 18159130:110:137
status: VERIFIED
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115 In the case of the S441N variant, however, the variant protein was detected only within intracellular compartments in Flp-In-293 cells.
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ABCG2 p.Ser441Asn 18159130:115:19
status: VERIFIED
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119 As demonstrated in Fig. 2A, in the concentration range of up to 2.5 mM, the accumulation of pheophorbide a in Flp-In-293/ABCG2 (S441N) was high, being similar to that in Flp-In-293/Mock cells.
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ABCG2 p.Ser441Asn 18159130:119:128
status: VERIFIED
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120 In addition, the cellular pherophorbide a accumulation in Flp-In-293/ABCG2 (F489L) cells was about the same level as those in Flp-In-293/ABCG2 (S441N) and Flp-In-293/Mock cells at the concentration of 2.5 mM.
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ABCG2 p.Ser441Asn 18159130:120:144
status: VERIFIED
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123 Expression of human ABCG2 WT, V12M, Q141K, S441N, and F489L in Flp-In-293 cells.
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ABCG2 p.Ser441Asn 18159130:123:43
status: VERIFIED
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129 433Genetic Polymorphisms of ABCG2 and Photosensitivity Risk whereas the S441N variant and F489L appeared unable to export pheophorbide a.
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ABCG2 p.Ser441Asn 18159130:129:72
status: VERIFIED
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130 Photosensitivity of Flp-In-293 cells expressing ABCG2 WT and SNP variants: Figure 2B demonstrates the cellular photosensitivity proˆles of Flp-In-293 cells expressing ABCG2 WT, V12M, Q141K, S441N, and F489L, as well as that of Flp-In-293/Mock cells.
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ABCG2 p.Ser441Asn 18159130:130:196
status: VERIFIED
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136 Flp-In-293/Mock and Flp-In-293/ABCG2 (S441N) cells were very sensitive to light, whereas Flp-In-293/ABCG2 (V12M), Flp-In-293/ABCG2 (Q141K), and Flp-In-293/ABCG2 (WT) cells were signiˆcantly more resistant.
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ABCG2 p.Ser441Asn 18159130:136:38
status: VERIFIED
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141 A, Flp-In-293 cells expressing human ABCG2 WT and SNP variants (V12M, Q141K, S441N, and F489L) were incubated with pheophorbide a at diŠerent concentrations (0, 0.63, 1.25, and 2.5 mM) at 379C for 4 hours.
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ABCG2 p.Ser441Asn 18159130:141:77
status: VERIFIED
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199 Indeed, we reported that the variants Q126stop, F208S, S248P, E334stop, and S441N are defective in the transport of hematoporphyrin.4) The F489L variant showed impaired transport activity.
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ABCG2 p.Ser441Asn 18159130:199:76
status: VERIFIED
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200 As demonstrated in the present study, as well as in our previous one,4) Flp-In-293 cells expressing the F208S, S248P, S441N, and F489L variants were sensitive to light when cells were treated with pheophorbide a. Thus, it is likely that humans with these alleles may be more susceptible to porphyrin-induced phototoxicity.
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ABCG2 p.Ser441Asn 18159130:200:118
status: VERIFIED
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PMID: 18237272 [PubMed] Nakagawa H et al: "Ubiquitin-mediated proteasomal degradation of non-synonymous SNP variants of human ABC transporter ABCG2."
No. Sentence Comment
2 Of these, ABCG2 F208S and S441N variants were found to be expressed at markedly low levels, whereas their mRNA levels were equal to those of the other SNP variants and ABCG2 WT (wild-type).
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ABCG2 p.Ser441Asn 18237272:2:26
status: VERIFIED
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3 Interestingly, protein expression levels of the ABCG2 F208S and S441N variants increased 6to 12-fold when Flp-In-293 cells were treated with MG132, a proteasome inhibitor.
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ABCG2 p.Ser441Asn 18237272:3:64
status: VERIFIED
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4 Immunoprecipitation followed by immunoblot analysis showed that the ABCG2 F208S and S441N variant proteins were endogenously ubiquitinated in Flp-In-293 cells, and treatment with MG132 significantly enhanced the level of these ubiquitinated variants.
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ABCG2 p.Ser441Asn 18237272:4:84
status: VERIFIED
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5 Immunofluorescence microscopy demonstrated that MG132 greatly affected the ABCG2 F208S and S441N variants in terms of both protein levels and intracellular distribution.
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ABCG2 p.Ser441Asn 18237272:5:91
status: VERIFIED
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7 The ABCG2 F208S and S441N variant proteins do not appear to be processed in the Golgi apparatus, but undergo ubiquitin-mediated protein degradation in proteasomes, whereas ABCG2 WT is sorted to the plasma membrane and then degraded via the lysosomal pathway.
X
ABCG2 p.Ser441Asn 18237272:7:20
status: VERIFIED
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26 The ABCG2 non-synonymous SNP variants Q126stop, F208S, S248P, E334stop, S441N and F489L were defective in the active transport of methotrexate and haematoporphyrin [18].
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ABCG2 p.Ser441Asn 18237272:26:72
status: VERIFIED
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27 Furthermore, the F208S, S248P, F431L, S441N, and F489L ABCG2 variants exhibited greatly altered protein expression levels and drug Abbreviations used: ABC, ATP-binding cassette; ABCG2, ABC subfamily G, member 2; BMA, bafilomycin A1; CPT, camptothecin; DMEM, Dulbecco`s modified Eagle`s medium; endo H, endoglycosidase H; ER, endoplasmic reticulum; ERAD, ER-associated degradation; FCS, fetal calf serum; Flp, flippase; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; HRP, horseradish peroxidase; ME, 2-mercaptoethanol; PNGase F, peptide N-glycosidase F; RT-PCR, reverse transcription-PCR; SN-38, 7-ethyl-10-hydroxycamptothecin; SNP, single nucleotide polymorphism; TBS, Tris-buffered saline; WT, wild-type.
X
ABCG2 p.Ser441Asn 18237272:27:38
status: VERIFIED
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30 In particular, the expression levels of the F208S and S441N ABCG2 variant proteins were markedly low.
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ABCG2 p.Ser441Asn 18237272:30:54
status: VERIFIED
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32 Nevertheless, the mechanism underlying the low expression levels of those ABCG2 variants (i.e. F208S and S441N) has not yet been elucidated.
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ABCG2 p.Ser441Asn 18237272:32:105
status: VERIFIED
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39 We provide direct evidence that ABCG2 non-synonymous SNP variants, i.e., F208S and S441N, undergo ubiquitin-mediated protein degradation in proteasomes.
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ABCG2 p.Ser441Asn 18237272:39:83
status: VERIFIED
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45 Flp-In-293 cells expressing ABCG2 WT (wild-type), F208S or S441N Flp-In-293 cells expressing ABCG2 WT, F208S or S441N, named Flp-In-293/ABCG2 (WT), Flp-In-293/ABCG2 (F208S) or Flp-In-293/ABCG2 (S441N) respectively, were prepared as described previously [8,33].
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ABCG2 p.Ser441Asn 18237272:45:59
status: VERIFIED
X
ABCG2 p.Ser441Asn 18237272:45:112
status: VERIFIED
X
ABCG2 p.Ser441Asn 18237272:45:194
status: VERIFIED
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88 To analyse quantitatively the distribution of the ABCG2 protein localized on the plasma membrane or in the cytosol, the immunofluorescence images captured by the confocal fluorescence microscopy system were processed by means of originally-developed computer software, Figure 1 Schematic illustration of human ABCG2 and expression of ABCG2 WT, F208S and S441N in Flp-In-293 cells at the transcription and protein levels (A) Arrows indicate the positions of amino acid substitutions in the non-synonymous SNP variants of ABCG2 F208S and S441N.
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ABCG2 p.Ser441Asn 18237272:88:354
status: VERIFIED
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ABCG2 p.Ser441Asn 18237272:88:536
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93 (B) The mRNA level was analysed by RT-PCR with total RNA extracted from Flp-In-293 cells expressing ABCG2 WT (WT), F208S or S441N.
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ABCG2 p.Ser441Asn 18237272:93:124
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94 For comparison of the protein levels, the cell lysates of Flp-In-209 cells expressing ABCG2 WT (WT), F208S or S441N were analysed by immunoblotting with the ABCG2-specific monoclonal antibody (BXP-21, top panel) or the GAPDH-specific antibody after PNGase F treatment.
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ABCG2 p.Ser441Asn 18237272:94:110
status: VERIFIED
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102 RESULTS Protein expression levels of ABCG2 WT, F208S, and S441N in Flp-In-293 cells Figure 1(A) depicts a schematic illustration of the human ABCG2 protein in order to show the sites of amino acid alteration in the ABCG2 SNP variants F208S and S441N.
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ABCG2 p.Ser441Asn 18237272:102:58
status: VERIFIED
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ABCG2 p.Ser441Asn 18237272:102:246
status: VERIFIED
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103 WT, F208S and S441N ABCG2 were individually expressed in Flp-In-293 cells by using the Flp (flippase) recombinase system [8,33].
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ABCG2 p.Ser441Asn 18237272:103:14
status: VERIFIED
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104 As shown in Figure 1(B), mRNA levels of ABCG2 WT, as well as F208S and S441N variants, were evenly represented in Flp-In-293 cells, where the mRNA levels of ABCG2 and GAPDH were determined by RT-PCR.
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ABCG2 p.Ser441Asn 18237272:104:71
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105 WT, F208S and S441N ABCG2, as well as GAPDH, were also detected by immunoblotting, and their expression levels were quantified.
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ABCG2 p.Ser441Asn 18237272:105:14
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109 Although mRNA levels were almost identical in ABCG2 WT and the SNP variants (F208S and S441N), the protein levels of those SNP variants were markedly low (Figure 1B).
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ABCG2 p.Ser441Asn 18237272:109:87
status: VERIFIED
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111 Characterization of F208S and S441N variants expressed in Flp-In-293 cells To gain insight into the molecular nature of ABCG2 WT and the two SNP variants (F208S and S441N), we performed immunoblot analysis experiments with cell lysate samples under reduced or non-reduced conditions.
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ABCG2 p.Ser441Asn 18237272:111:30
status: VERIFIED
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ABCG2 p.Ser441Asn 18237272:111:165
status: VERIFIED
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112 Figure 2(A) shows the effect of ME treatment on the migration of ABCG2 WT, F208S and S441N proteins on SDS/PAGE.
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ABCG2 p.Ser441Asn 18237272:112:85
status: VERIFIED
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115 These results suggest that the ABCG2 F208S and S441N proteins form homodimers through a cysteinyl disulfide bond, as observed for the WT ABCG2 protein.
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ABCG2 p.Ser441Asn 18237272:115:47
status: VERIFIED
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118 On the other hand, for the S441N ABCG2 variant, two forms of ABCG2 were detected at a molecular mass of approx. 81 kDa.
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ABCG2 p.Ser441Asn 18237272:118:27
status: VERIFIED
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122 Although the 81 kDa major band of ABCG2 WT was not at all affected by endo H treatment, the apparent molecular masses of the smaller protein bands of ABCG2 F208S (74 kDa) and S441N (78 kDa) decreased after endo H treatment.
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ABCG2 p.Ser441Asn 18237272:122:175
status: VERIFIED
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124 Among ABCG2 WT and the SNP variants Figure 2 Immunoblot detection of ABCG2 WT, F208S and S441N proteins expressed in Flp-In-293 cells (A) Effect of ME on the homodimer or monomer form of ABCG2 WT and the SNP variants.
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ABCG2 p.Ser441Asn 18237272:124:89
status: VERIFIED
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125 Cell lysate samples (20 µg of protein) were subjected to SDS/PAGE after treatment with [ME (+)] or without [ME(-)] ME. ABCG2 WT, F208S and S441N proteins were then detected by immunoblotting with the BXP-21 antibody as described in the Materials and methods section.
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ABCG2 p.Ser441Asn 18237272:125:144
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126 After ME treatment ABCG2 WT, F208S and S441N proteins were converted from homodimers into monomers.
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ABCG2 p.Ser441Asn 18237272:126:39
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131 ABCG2 WT, F208S and S441N proteins in the resulting samples were analysed by immunoblotting with the BXP-21 antibody.
X
ABCG2 p.Ser441Asn 18237272:131:20
status: VERIFIED
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136 F208S and S441N, their N-linked oligosaccharide structures appear to be different.
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ABCG2 p.Ser441Asn 18237272:136:10
status: VERIFIED
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137 The mature N-linked oligosaccharide of ABCG2 WT may have a structure which is resistant to endo H, whereas the immature N-linked oligosaccharides of the F208S and S441N variant proteins are susceptible to this endoglycosidase.
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ABCG2 p.Ser441Asn 18237272:137:163
status: VERIFIED
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138 Effect of MG132 and BMA on the protein expression levels of F208S and S441N variants We hypothesize that the low protein expression levels of the F208S and S441N variants are due to rapid degradation of those proteins through ubiquitin-mediated proteasomal proteolysis.
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ABCG2 p.Ser441Asn 18237272:138:70
status: VERIFIED
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ABCG2 p.Ser441Asn 18237272:138:156
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140 Flp-In-293 cells expressing ABCG2 F208S or S441N were incubated in the presence of 0, 0.4 or 2.0 µM MG132 for 24 h, and then cell lysate samples were immediately prepared.
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ABCG2 p.Ser441Asn 18237272:140:43
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141 Protein expression levels of the F208S and S441N variants were determined by immunoblotting after PNGase F treatment as described above.
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ABCG2 p.Ser441Asn 18237272:141:43
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144 After 24 h treatment with 2 µM MG132, ABCG2 F208S and S441N Figure 3 Effects of MG132 on the glycosylation status and protein levels of ABCG2 F208S and S441N variants expressed in Flp-In-293 cells (A) Flp-In-293/ABCG2 (F208S) and Flp-In-293/ABCG2 (S441N) cells were incubated with MG132 at concentrations of 0, 0.4 and 2 µM for 24 h at 37◦C. Cell lysate samples (20 µg of protein) were prepared in the presence of ME. ABCG2 F208S and S441N variant proteins were either analysed directly or treated with PNGase F for 10 min at 37◦C before immunoblotting with the ABCG2-specific monoclonal antibody (BXP-21).
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ABCG2 p.Ser441Asn 18237272:144:59
status: VERIFIED
X
ABCG2 p.Ser441Asn 18237272:144:160
status: VERIFIED
X
ABCG2 p.Ser441Asn 18237272:144:256
status: VERIFIED
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ABCG2 p.Ser441Asn 18237272:144:459
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145 The signal intensity of the non-glycosylated form of the ABCG2 F208S or S441N variant was measured after PNGase F treatment.
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ABCG2 p.Ser441Asn 18237272:145:72
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150 (B) Detection of aggregated forms (>200 kDa) of ABCG2 F208S and S441N variants.
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ABCG2 p.Ser441Asn 18237272:150:64
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151 Flp-In-293/ABCG2 (F208S) and Flp-In-293/ABCG2 (S441N) cells were incubated with MG132 at concentrations of 0, 0.4 and 2 µM for 24 h at 37◦C. Cell lysate samples (20 µg of protein) were prepared in the presence of ME. ABCG2 F208S and S441N variant proteins were prepared from MG132-treated cells as described above and analysed by immunoblotting with the BXP-21 antibody in the absence of PNGase F treatment.
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ABCG2 p.Ser441Asn 18237272:151:47
status: VERIFIED
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ABCG2 p.Ser441Asn 18237272:151:250
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152 The aggregated forms of ABCG2 F208S and S441N are indicated (arrowheads).
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ABCG2 p.Ser441Asn 18237272:152:40
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160 It is of interest to note that MG132 treatments enhanced the levels of the non-glycosylated form (72 kDa) for both the F208S and S441N variants when those cell lysate samples were not treated with PNGase F (Figure 3A).
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ABCG2 p.Ser441Asn 18237272:160:129
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161 More importantly, on immunoblot analysis without PNGase F treatment, aggregated forms (arrowheads in Figure 3B) of both the ABCG2 F208S and S441N variants were detected in the high-molecular-mass range (over 200 kDa).
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ABCG2 p.Ser441Asn 18237272:161:140
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163 The protein level of ABCG2 WT increased more than 2.5-fold when cells were treated with BMA, which inhibits lysosomal degradation, whereas the ABCG2 F208S and S441N variant proteins were minimally affected by the same treatment.
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ABCG2 p.Ser441Asn 18237272:163:159
status: VERIFIED
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166 Effect of MG132 on the ubiquitination states of F208S and S441N variants To investigate the effect of MG132 on the ubiquitination states of the ABCG2 F208S and S441N variant proteins, Flp-In-293 cells expressing those SNP variants were incubated in the presence or absence of 2 µM MG132 for 24 h.
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ABCG2 p.Ser441Asn 18237272:166:58
status: VERIFIED
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ABCG2 p.Ser441Asn 18237272:166:160
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167 As shown in Figure 4, significant increases in the ubiquitinated forms of the F208S and S441N variant proteins were detected by immunoblotting with mouse monoclonal anti-ubiquitin antibody after immunoprecipitation with anti-ABCG2 antibody (BXP-21).
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ABCG2 p.Ser441Asn 18237272:167:88
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170 The corresponding results are presented in Figures 4(B) and 4(D), where ubiquitinated forms (arrowheads) appeared to be more prominent than with the monoclonal anti-ubiquitin antibody Figure 4 Effect of MG132 on ubiquitination of ABCG2 F208S and S441N Afterincubationinthepresenceorabsenceof2 µMMG132for24 hat37◦C,celllysatesamples were prepared from Flp-In-293/ABCG2 (F208S) (A, B) and Flp-In-293/ABCG2 (S441N) (C, D) cells.
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ABCG2 p.Ser441Asn 18237272:170:248
status: VERIFIED
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ABCG2 p.Ser441Asn 18237272:170:419
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177 Effect of MG132 on the cellular localization of F208S and S441N variants It is of interest to know how inhibition of proteasomal protein degradation by MG132 affects the cellular localization of the ABCG2 F208S and S441N variant proteins.
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ABCG2 p.Ser441Asn 18237272:177:58
status: VERIFIED
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ABCG2 p.Ser441Asn 18237272:177:215
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178 Figure 5 shows immunofluorescence images of Flp-In-293 cells expressing ABCG2 WT, F208S or S441N proteins that has been incubated in the presence or absence of 2 µM MG132 for 24 h.
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ABCG2 p.Ser441Asn 18237272:178:91
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186 After Figure 5 Immunocytochemical staining of Flp-In-293 cells expressing ABCG2 WT, F208S or S441N proteins Cells were incubated in the presence (+MG132) or absence (none) of 2 µM MG132 for 24 h at 37◦C. ABCG2 proteins were detected by using a mouse monoclonal ABCG2 antibody (either BXP-21 or 5D3) and Alexa Fluor® 488 (green fluorescence).
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ABCG2 p.Ser441Asn 18237272:186:93
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190 In the case of the ABCG2 S441N variant, MG132 treatment enhanced the localization of this ABCG2 variant protein at the plasma membrane and in intracellular compartments (Figures 5j and 5l).
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ABCG2 p.Ser441Asn 18237272:190:25
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195 Remarkable differences were observed after MG132 treatment in terms of the cellular localization and/or the quantity of the F208S or S441N variant ABCG2 proteins as shown in Figure 6(A).
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ABCG2 p.Ser441Asn 18237272:195:133
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196 It is noteworthy that protein levels of the F208S and S441N variants were clearly enhanced in intracellular compartments after MG132 treatment, as observed with the BXP-21 antibody.
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ABCG2 p.Ser441Asn 18237272:196:54
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197 In addition, plasma membrane localization of the S441N variant was also enhanced by MG132 treatment, as observed with the 5D3 antibody.
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ABCG2 p.Ser441Asn 18237272:197:49
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201 Figure 6 Analysis of the effects of MG132 on the cellular localization of ABCG2 WT, F208S or S441N proteins in Flp-In-293 cells (A) Cells were incubated in the presence or the absence (None) of 2 µM MG132 for 24 h at 37◦C. ABCG2 proteins in cells were detected using an ABCG2-specific monoclonal antibody [either BXP-21 (BXP21) or 5D3] as described in the Materials and methods section.
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ABCG2 p.Ser441Asn 18237272:201:93
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208 In a previous study using the Flp recombinase system [33], we functionally characterized the non-synonymous polymorphisms (V12M, Q141K, F208S, S248P, F431L, S441N and F489L) in terms of their protein expression level, drug resistance profile and prazosin-stimulated ATPase activity.
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ABCG2 p.Ser441Asn 18237272:208:157
status: VERIFIED
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210 In particular, the expression levels of the F208S and S441N variant proteins were markedly low (Figure 1), consistent with the recent report of Yoshioka et al. [37].
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ABCG2 p.Ser441Asn 18237272:210:54
status: VERIFIED
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212 Ubiquitin-mediated proteasomal degradation of F208S and S441N variants In the present study, we undertook the biochemical analysis of the molecular mechanisms underlying the low expression levels of the ABCG2 F208S and S441N variants.
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ABCG2 p.Ser441Asn 18237272:212:56
status: VERIFIED
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ABCG2 p.Ser441Asn 18237272:212:219
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216 On the basis of those recent findings, we have examined the contribution of ubiquitin-mediated proteasomal degradation to the low-level expression of F208S and S441N ABCG2 variants by testing the effect of MG132.
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ABCG2 p.Ser441Asn 18237272:216:160
status: VERIFIED
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217 The presence of MG132 increased both the protein levels (Figure 3) and the ubiquitinated forms (Figure 4) of the F208S and S441N variant proteins.
X
ABCG2 p.Ser441Asn 18237272:217:123
status: VERIFIED
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219 Misfolded proteins (e.g. ABCG2 F208S and S441N variants) are considered to be removed from the ER by retrotranslocation to the cytosol and then degraded by the ubiquitin-proteasome system by a process known as ERAD [38,39].
X
ABCG2 p.Ser441Asn 18237272:219:41
status: VERIFIED
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223 N-linked oligosaccharides of ABCG2 F208S and S441N variants During de novo synthesis in the ER, oligosaccharides are added to asparagine (N-glycosylation) or serine residues (O-glycosylation) of glycoproteins.
X
ABCG2 p.Ser441Asn 18237272:223:45
status: VERIFIED
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231 Their findings were confirmed by recent experiments in which Asn596 of the ABCG2 protein was changed to glutamine and expressed in Flp-In-293 cells by using the Flp recombinase system (H. Nakagawa, Scheme 1 Schematic illustration of plausible pathways for protein processing and degradation of ABCG2 WT and SNP variants (F208S and S441N) We have provided evidence that ABCG2 WT and the variants undergo degradation by different pathways.
X
ABCG2 p.Ser441Asn 18237272:231:333
status: VERIFIED
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236 It is important to note that N-linked oligosaccharide processing was greatly impaired in the ABCG2 F208S and S441N SNP variants.
X
ABCG2 p.Ser441Asn 18237272:236:109
status: VERIFIED
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240 It is likely, however, that the ABCG2 F208S and S441N variant proteins did not undergo Golgi-apparatus-mediated glycoprocessing, but were passed through the so-called ERAD pathway.
X
ABCG2 p.Ser441Asn 18237272:240:48
status: VERIFIED
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241 The immature and non-glycosylated forms of ABCG2 F208S and S441N were detected when Flp-In-293/ABCG2 (F208S) and Flp-In-293/ABCG2 (S441N) cells were treated with MG132 for 24 h (Figure 3A), suggesting that those variant proteins were ubiquitinated in both pre-and post-N-glycosylation reactions and then readily degraded in proteasomes.
X
ABCG2 p.Ser441Asn 18237272:241:59
status: VERIFIED
X
ABCG2 p.Ser441Asn 18237272:241:131
status: VERIFIED
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244 While we have demonstrated here the ubiquitination and proteasomal degradation of the ABCG2 F208S or S441N variant homodimers, it will be important to study the fate of heterodimers (WT/SNP variant) in the future.
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ABCG2 p.Ser441Asn 18237272:244:101
status: VERIFIED
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251 As exemplified by the ABCG2 F208S and S441N variants, it is likely that several other SNP variants may undergo degradation via the ERAD pathway.
X
ABCG2 p.Ser441Asn 18237272:251:38
status: VERIFIED
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PMID: 18249138 [PubMed] Hazai E et al: "Homology modeling of breast cancer resistance protein (ABCG2)."
No. Sentence Comment
245 However, in our model, R482 cannot form interaction with rhodamine, but L484 is in interacting distance Table 3 Mutations on BCRP and their effect on its function Mutation Effect/results Reference V12M Did not effect Hemato and MTX transport Tamura et al. (2006) G51C Did not effect Hemato and MTX transport Tamura et al. (2006) K86M Inactivates transporter (dominant negative effect on ATPase activity); alters subcellular distribution Henriksen et al. (2005a) K86M Transporter inactive, but still able to bind ATP Ozvegy et al. (2002) Q126stop Defective porphyrin transport Tamura et al. (2006) Q141K Did not effect Hemato and MTX transport Tamura et al. (2006) T153M Did not effect Hemato and MTX transport Tamura et al. (2006) Q166E Did not effect Hemato and MTX transport Tamura et al. (2006) I206L Did not effect Hemato and MTX transport Tamura et al. (2006) F208S Defective porphyrin transport Tamura et al. (2006) S248P Defective porphyrin transport Tamura et al. (2006) E334stop Defective porphyrin transport Tamura et al. (2006) F431L Effects MTX transport Tamura et al. (2006) S441N Defective porphyrin transport Tamura et al. (2006) E446-mutants No drug resistance Miwa et al. (2003) R482G, R482T Effects MTX transport Tamura et al. (2006) R482T Substrate drug transport and inhibitor efficiency is not mediated by changes in drug-binding Pozza et al. (2006) R482G, R482T Substitution influence the substrate specificity of the transporter Ozvegy et al. (2002) R482G, R482T Altered substrate specificity Honjo et al. (2001) R482G Methotrexate not transported Chen et al. (2003b) Mitomo et al. (2003) R482G Resistance to hydrophilic antifolates in vitro, G482-ABCG2 mutation confers high-level resistance to various hydrophilic antifolates Shafran et al., (2005) R482G Three distinct drug, binding sites Clark et al. (2006) R482G Altered substrate specificity, granulocyte maturation uneffected Ujhelly et al. (2003) R482 mutants Higher resistance to mitoxantrone and doxorubicin than wt Miwa et al. (2003) R482X Affects substrate transport and ATP hydrolysis but not substrate binding Ejendal et al. (2006) F489L Impaired porphyrin transport Tamura et al. (2006) G553L; G553E Impaired trafficing, expression, and N-linked glycosylation Polgar et al. (2006) L554P Dominant negative effect on drug sensitivity Kage et al. (2002) N557D Resistance to MTX, but decreased transport of SN-38; N557E no change in transport compared to wt Miwa et al. (2003) F571I Did not effect Hemato and MTX transport Tamura et al. (2006) N590Y Did not effect Hemato and MTX transport Tamura et al. (2006) C592A Impaired function and expression Henriksen et al. (2005b) C592A/C608A Restored plasma mb expression; MTX transport normal, BODIPY-prazosin impaired Henriksen et al. (2005b) C603A Disulfide bridge; no functional or membrane targeting change Henriksen et al. (2005b) C608A Impaired function and expression Henriksen et al. (2005b) D620N Did not effect Hemato and MTX transport Tamura et al. (2006) H630X No change in transport Miwa et al. (2003) Cand N-terminal truncated Impaired trafficing Takada et al. (2005) with the ligand.
X
ABCG2 p.Ser441Asn 18249138:245:1088
status: NEW
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PMID: 18253130 [PubMed] Lemos C et al: "Drug transporters: recent advances concerning BCRP and tyrosine kinase inhibitors."
No. Sentence Comment
45 Breedveld et al (2005) showed that Table 1 BCRP substrates and polymorphisms Substrates Classical anticancer drugs Novel targeted drugs Mitoxantrone Canertinib (CI-1033)a Anthracyclinesb Imatiniba Camptothecins Nilotiniba Antifolatesb Gefitiniba Erlotinib Flavopiridol Polymorphismsc Variant Amino-acid change Effect G34A Val12Met (V12M) No change C376T Gln126stop (Q126T) No active BCRP protein C421A Gln141Lys (Q141K) Decreased protein levels and drug resistance Increased gefitinib-associated toxicity (diarrhoea) Increased imatinib accumulation in vitro, but no changes in the pharmacokinetic parameters of imatinib in vivo G1322A Ser441Asn (S441N) Decreased protein levels and different subcellular localisation BCRP ¼ breast cancer resistance protein.
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ABCG2 p.Ser441Asn 18253130:45:635
status: VERIFIED
X
ABCG2 p.Ser441Asn 18253130:45:646
status: VERIFIED
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113 Another SNP, G1322A (S441N), showed even lower levels of protein expression.
X
ABCG2 p.Ser441Asn 18253130:113:21
status: VERIFIED
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PMID: 18363541 [PubMed] Tamura A et al: "Drug-induced phototoxicity evoked by inhibition of human ABC transporter ABCG2: development of in vitro high-speed screening systems."
No. Sentence Comment
230 Plasma membrane Outside Inside ATP-binding cassette H2 N COOH V12M G51C Q126stop Q141K T153M R160Q Q166E I206L F208S S248P E334stop F431L F489L S441N R482G R482T F571I R575stop N590Y D620N T542A A528T D296H P269S A.
X
ABCG2 p.Ser441Asn 18363541:230:144
status: NEW
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231 0.0 0.1 0.2 0.3 0.4 0.5 Mock WT V12M G51C Q126stop Q141K T153M Q166E I206L F208S S248P E334stop F431L S441N F489L F571I N590Y D620N R482G R482T ATP-dependenthematoporphyrintransport (nmol/min/mgprotein) B. interactions should also take into consideration the presence of multiple flavonoids.
X
ABCG2 p.Ser441Asn 18363541:231:102
status: NEW
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245 Based on the presently available data on SNPs and acquired mutations, we have created a total of 18 variant forms of ABCG2 (V12M, G51C, Q126stop, Q141K, T153M, Q166E, I206L, F208S, S248P, E334stop, F431L, S441N, R482G, R482T, F489L, F571I, N590Y, and D620N) by site-directed mutagenesis and expressed them in insect cells.
X
ABCG2 p.Ser441Asn 18363541:245:205
status: NEW
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246 The variants Q126stop, F208S, S248P, E334stop, and S441N were defective in the transport of hematoporphyrin (Figure 9).
X
ABCG2 p.Ser441Asn 18363541:246:51
status: NEW
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248 Flp-In-293 cells expressing the F208S, S248P, S441N, and F489L variants were sensitive to light when cells were treated with pheophorbide a [87,88].
X
ABCG2 p.Ser441Asn 18363541:248:46
status: NEW
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249 To further elucidate the significance of ABCG2 in cellular porphyrin homeostasis, we observed the cellular accumulation and compartmentation of porphyrin and pheophorbide a by means of a new fluorescence microscopy technology, and found that the accumulation of porphyrin and pheophorbide a in the cytoplasmic compartment was significantly higher in Flp-In-293 cells expressing S441N and F489L variants, as compared with those expressing WT, V12M, or Q141K [88].
X
ABCG2 p.Ser441Asn 18363541:249:378
status: NEW
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252 Amino acid Porphyrin transport* Allele frequency (%)‡ cDNA position Location Wild-type allele Variant alllele V12M ++ 2.0 - 90.0 34 Exon 2 G A Q126stop - 0.0 - 1.7 376 Exon 4 C T Q141K ++ 0.0 - 35.5 421 Exon 5 C A T153M ++ 3.3 458 Exon 5 C T Q166E ++ N.D. 496 Exon 5 C G I206L ++ 10.0 616 Exon 6 A C F208S - N.D. 623 Exon 6 T C S248P - N.D. 742 Exon 7 T C E334stop - N.D. 1000 Exon 9 G T F431L ++ 0.8 1291 Exon 11 T C S441N - 0.5 1322 Exon 11 G A F489L + 0.5 - 0.8 1465 Exon 12 T C F571L ++ 0.5 1711 Exon 14 T A N590Y ++ 0.0 - 1.0 1768 Exon 15 A T D620N ++ 0.5 1858 Exon 16 G A *Transport of hematoporphyrin is indicated by either '+` (positive) or '-' (negative).
X
ABCG2 p.Ser441Asn 18363541:252:425
status: NEW
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PMID: 18464048 [PubMed] Gradhand U et al: "Pharmacogenomics of MRP transporters (ABCC1-5) and BCRP (ABCG2)."
No. Sentence Comment
250 It should be noted that many xeno- and endobiotic BCRP Figure 5 Predicted membrance topology of BCRP (ABCG2) based on hydrophobicity analysis. Locations of the non-synonymous polymorphisms are indicated with arrows. See Table 5 for allele frequencies and description of funtional consequences. NH2 COOH NBD Val12Met Gly51Cys Gln126* Ala149Pro Gln141Lys Thr153Met Arg160Gln Arg163Lys Gln166Glu Phe506Ser Phe507Leu Val508Leu Met509* Phe489Leu Ser441Asn Phe431Leu Glu334* Ile206Leu Ala315del Thr316del Phe208Ser Asp296His Ser248Pro Pro269Ser Phe571Ile Arg575* Asn590Tyr Asp620Asn in out Membrane BCRP (ABCG2) NBD Val12Met NBDNBD Val12Met substrates are also transported by other efflux transporters, especially P-glycoprotein, thus extrapolating BCRP related in vitro data to the in vivo situation may be difficult.
X
ABCG2 p.Ser441Asn 18464048:250:441
status: VERIFIED
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287 Nevertheless, a number of groups have investigated the impact of the 1322G>T variation (Ser441Asn) and agree that this mutation leads to a markedly lower BCRP expression and loss in membrane localization in transfected cells (Kondo et al., 2004; Tamura et al., 2007).
X
ABCG2 p.Ser441Asn 18464048:287:88
status: VERIFIED
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318 Available data in relation to BCRP pharmacogenetics suggest at least one of the known non-synonymous polymorphisms (421C>A/Gln141Lys) and possibly a few others (34G>A/Val12Met and 1322G>T/Ser441Asn) may be of functional and clinical importance.
X
ABCG2 p.Ser441Asn 18464048:318:188
status: VERIFIED
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PMID: 18668433 [PubMed] Koshiba S et al: "Human ABC transporters ABCG2 (BCRP) and ABCG4."
No. Sentence Comment
225 Based on the currently available data on SNPs and acquired mutations, a total of 18 variant forms of ABCG2 (V12M, G51C, Q126stop, Q141K, T153M, Q166E, I206L, F208S, S248P, E334stop, F431L, S441N, R482G, R482T, F489L, F571I, N590Y, and D620N) were created by site-directed mutagenesis and expressed in Sf9 insect cells (Tamura et al. 2006, 2007).
X
ABCG2 p.Ser441Asn 18668433:225:189
status: NEW
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232 S. Koshiba et al. variants Q126stop, F208S, S248P, E334stop, and S441N substantially lack transport activity for both haematoporphyrin and methotrexate.
X
ABCG2 p.Ser441Asn 18668433:232:66
status: NEW
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235 Flp-In-293 cells expressing the F208S, S248P, S441N, and F489L variants were sensitive to light when those cells were treated with pheophorbide a (Tamura et al. 2007).
X
ABCG2 p.Ser441Asn 18668433:235:46
status: NEW
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237 It has most recently revealed that F208S and S441N variant proteins were ubiquitinated and readily degraded in proteasomes in Flp-In-293 cells (Nakagawa et al. 2008).
X
ABCG2 p.Ser441Asn 18668433:237:45
status: NEW
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PMID: 18855611 [PubMed] Zhou SF et al: "Clinical pharmacogenetics and potential application in personalized medicine."
No. Sentence Comment
636 The localization of other variants including V12M, A149P, R163K, Q166E, P269S and S441N was also examined.
X
ABCG2 p.Ser441Asn 18855611:636:82
status: VERIFIED
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637 All polymorphisms, including V12M and Q141K, had an apical localization, and only the S441N variant displayed an intracellular staining [275].
X
ABCG2 p.Ser441Asn 18855611:637:86
status: VERIFIED
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PMID: 18958403 [PubMed] Furukawa T et al: "Major SNP (Q141K) variant of human ABC transporter ABCG2 undergoes lysosomal and proteasomal degradations."
No. Sentence Comment
30 Furthermore, the Q141K SNP was reportedly associated with a higher incidence of diarrhea in non-small cell lung cancer patients treated with gefitinib (22).
X
ABCG2 p.Ser441Asn 18958403:30:45
status: NEW
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35 Furthermore, certain SNPs, such as F208S and S441N, were found to greatly affect the stability of ABCG2 in the endoplasmic reticulum (ER) and to enhance the protein degradation rate via ubiquitination and proteasomal proteolysis (32).
X
ABCG2 p.Ser441Asn 18958403:35:45
status: VERIFIED
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60 The sites of three non-synonymous SNPs, Q141K, F208S and S441N, are indicated.
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ABCG2 p.Ser441Asn 18958403:60:57
status: VERIFIED
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129 Protein expression levels of the WT and the Q141K variant were determined by immunoblotting after PNGase F treatment in the same way as described above.
X
ABCG2 p.Ser441Asn 18958403:129:68
status: NEW
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130 As shown in Fig. 3A, the protein level of the Q141K variant was approximately two-fold enhanced by treatment with the proteasome inhibitor MG132.
X
ABCG2 p.Ser441Asn 18958403:130:38
status: NEW
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174 The nonsynonymous SNP variants of Q126stop, F208S, S248P, E334stop, S441N, and F489L were defective in the active transport of methotrexate and hematoporphyrin (42).
X
ABCG2 p.Ser441Asn 18958403:174:68
status: VERIFIED
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175 Furthermore, the F208S, S248P, F431L, S441N, and F489L variants exhibited greatly altered protein expression levels and drug resistance profiles (18).
X
ABCG2 p.Ser441Asn 18958403:175:38
status: VERIFIED
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176 In particular, expression levels of the F208S and S441N variant proteins were markedly low.
X
ABCG2 p.Ser441Asn 18958403:176:50
status: VERIFIED
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131 In particular, expression levels of the F208S and S441N variant proteins were markedly low.
X
ABCG2 p.Ser441Asn 18958403:131:50
status: NEW
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344 The sites of three nonsynonymous SNPs, Q141K, F208S and S441N, are indicated.
X
ABCG2 p.Ser441Asn 18958403:344:56
status: NEW
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PMID: 19111842 [PubMed] Wakabayashi-Nakao K et al: "Quality control of human ABCG2 protein in the endoplasmic reticulum: ubiquitination and proteasomal degradation."
No. Sentence Comment
813 Furthermore, certain non-synonymous single nucleotide polymorphisms (SNPs), such as Q141K, F208S, and S441N, were also found to greatly affect the stability of ABCG2 in the endoplasmic reticulum (ER) and to enhance the protein degradation rate via ubiquitination and proteasomal proteolysis [9a,b].
X
ABCG2 p.Ser441Asn 19111842:813:102
status: NEW
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950 The non-synonymous SNP variants Q126stop, F208S, S248P, E334stop, S441N, and F489L were defective in the active transport of methotrexate and hematoporphyrin [54].
X
ABCG2 p.Ser441Asn 19111842:950:66
status: NEW
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951 Furthermore, the F208S, S248P, F431L, S441N, and F489L variants exhibited greatly altered protein expression levels and drug resistance profiles [34].
X
ABCG2 p.Ser441Asn 19111842:951:38
status: NEW
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952 In particular, expression levels of the F208S and S441N variant proteins were markedly low [9a,34].
X
ABCG2 p.Ser441Asn 19111842:952:50
status: NEW
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953 5.2. Impact of SNPs on protein stability and function of ABCG2 Our recent study provided evidence that F208S and S441N variant proteins did not undergo Golgi apparatus-mediated glycoprocessing but were passed through the so-called "ERAD" pathway.
X
ABCG2 p.Ser441Asn 19111842:953:113
status: NEW
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954 The immature and non-glycosylated forms of F208S and S441N were detected when Flp-In-293/ABCG2 (F208S) and Flp-In-293/ABCG2 (S441N) cells were treated with MG132 for 24 h, suggesting that those variant proteins were ubiquitinated in both pre and post N-glycosylation reactions and then readily degraded in proteasomes.
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ABCG2 p.Ser441Asn 19111842:954:53
status: NEW
X
ABCG2 p.Ser441Asn 19111842:954:125
status: NEW
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PMID: 19200005 [PubMed] Porcelli L et al: "Intracellular trafficking of MDR transporters and relevance of SNPs."
No. Sentence Comment
149 Polymorphisms and Mutations Affecting the Cellular Localization of MDR Transporters Transporter Variant Amino-acid Change Localization References Intracellular + plasma membrane [99] C421A Q141K Plasma membrane [97, 98, 101] Intracellular + plasma membrane [98, 101] G34A V12M Plasma membrane [97, 99] ABCG2 G1322A S441N Intracellular [97, 98] ABCC1 G128C C43S Intracellular + plasma membrane [116] 4175-4180del RM1392-1393del Intracellular (ER) [118] C2302T R768W Intracellular (ER) [119] A3517T I1173F Intracellular (ER) [120, 121] C2366T S789F Intracellular + plasma membrane [122] ABCC2 G4348A A1459T Intracellular + plasma membrane [122] 293 transfected cells.
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ABCG2 p.Ser441Asn 19200005:149:315
status: NEW
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194 Another polymorphism affecting the localization of the transporter is the G1322A nonsynonymous (S441N) SNP, which displayed intracellular localization in LLC-PK1 cells, contrasting with the apical localization of wild-type ABCG2 [97].
X
ABCG2 p.Ser441Asn 19200005:194:96
status: NEW
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195 Additionally, the expression levels of S441N ABCG2 were much lower than the wild-type ABCG2 and also lower than the Q141K [97].
X
ABCG2 p.Ser441Asn 19200005:195:39
status: NEW
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197 [98] showed that the S441N variant was associated with markedly lower levels of protein expression than the wild-type ABCG2, along with a marked increase in sensitivity to SN-38 and mitoxantrone.
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ABCG2 p.Ser441Asn 19200005:197:21
status: NEW
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198 In contrast with the wild-type ABCG2, which was mainly expressed in the plasma membrane of the Flp-In-293 cells, the S441N variant appeared to remain in the intracellular space and was not expressed in the plasma membrane.
X
ABCG2 p.Ser441Asn 19200005:198:117
status: NEW
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217 From these studies it is clear that only the S441N and, possibly, the V12M and Q141K variants might affect ABCG2 localization within the cell.
X
ABCG2 p.Ser441Asn 19200005:217:45
status: NEW
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PMID: 19827267 [PubMed] Ishikawa T et al: "Human ABC transporter ABCG2 in cancer chemotherapy and pharmacogenomics."
No. Sentence Comment
222 COOH H2N N590Y V12M G51C Q126stop Q141K T153M Q166E I206L F208S S248P E334stop F431L F489L D620N R482G R482T S441N F571I OUT IN R160Q R575stop ATP-binding site Figure 7. Continued A 005-024 pp JETO-0900616-TI (Review).indd 8/7/2009 3:59:50 19 Q141K has been associated with lower levels of protein expression and impaired transport in vitro (Imai et al., 2002; Kobayashi et al., 2005; Misuarai et al., 2004; Zamber et al., 2003; Morisaki et al., 2008; Kondo et al., 2004).
X
ABCG2 p.Ser441Asn 19827267:222:109
status: NEW
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227 The non-synonymous SNP variants Q126stop, F208S, S248P, E334stop, S441N, and F489L were defective in the active transport of methotrexate and hematoporphyrin (Tamura et al., 2006) (Fig. 7C).
X
ABCG2 p.Ser441Asn 19827267:227:66
status: NEW
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228 Furthermore, the F208S, S248P, F431L, S441N, and F489L variants exhibited greatly altered protein expression levels and drug resistance profiles Figure 7. Continued WT V12M Q141K F208S S248P F431L S441N F489L R482G R482T Protein expression + + + - + + - + + + MTX transport + + + - - - - +/ - - Porphyrin transport + + + - - + - +/ + + SN-38 resistance + + + - +/ + - - + + MX resistance + + + - - - - - -- - - - - - - - +/ - - - - - - - - + + Doxorubicin resistance + + Daunorubicin resistance + + ATPase activity (Prazosin) + + WTV12M Q141K F431L F489L S248P F208S S441L R482G R482T ∆1.5 ∆3 ∆3.5 ∆5 ∆4 - - - - - - -- - - B 005-024 pp JETO-0900616-TI (Review).indd 8/7/2009 3:59:51 20     Journal of Experimental Therapeutics and Oncology  Vol. 8  2009 (Tamura et al., 2007b).
X
ABCG2 p.Ser441Asn 19827267:228:38
status: NEW
X
ABCG2 p.Ser441Asn 19827267:228:197
status: NEW
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229 In particular, expression levels of the F208S and S441N variant proteins were markedly low (Tamura et al., 2007b).
X
ABCG2 p.Ser441Asn 19827267:229:50
status: NEW
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230 We have recently shown that F208S and S441N variant proteins do not undergo Golgi apparatus-mediated glycoprocessing but are passed through the so-called "ERAD" pathway.
X
ABCG2 p.Ser441Asn 19827267:230:38
status: NEW
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231 The immature and non-glycosylated forms of F208S and S441N were detected when Flp-In-293/ABCG2 (F208S) and Flp-In-293/ABCG2 (S441N) cells were treated with MG132 for 24 h, suggesting that those variant proteins were ubiquitinated in both pre and post N-glycosylation reactions and then readily degraded in proteasomes.
X
ABCG2 p.Ser441Asn 19827267:231:53
status: NEW
X
ABCG2 p.Ser441Asn 19827267:231:125
status: NEW
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232 It is known that, in the ER, the N-linked glycans play pivotal roles in protein fold- 0.0 0.5 1.0 1.5 Mock WT V12M G51C Q126stop Q141K T153M Q166E I206L F208S S248P E334stop F431L S441N F489L F571I N590Y D620N R482G R482T Methotrexatetransport (nmol/min/mgprotein) Methotrexate 0.0 0.5 1.0 1.5 0.0 0.5 1.0 1.5 Mock WT V12M G51C Q126stop Q141K T153M Q166E I206L F208S S248P E334stop F431L S441N F489L F571I N590Y D620N R482G R482T Methotrexatetransport (nmol/min/mgprotein) MethotrexateMethotrexate Porphyrintransport (nmol/min/mgprotein) 0.0 0.1 0.2 0.3 0.4 0.5 0.0 0.1 0.2 0.3 0.4 0.5 Porphyrin Figure 7.
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ABCG2 p.Ser441Asn 19827267:232:180
status: NEW
X
ABCG2 p.Ser441Asn 19827267:232:388
status: NEW
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PMID: 19909340 [PubMed] Nakagawa H et al: "Disruption of N-linked glycosylation enhances ubiquitin-mediated proteasomal degradation of the human ATP-binding cassette transporter ABCG2."
No. Sentence Comment
22 In fact, the protein expression levels of ABCG2 SNP variants (Q141K, F208S and S441N) were significantly lower than that of the wild-type (WT) ABCG2 [23].
X
ABCG2 p.Ser441Asn 19909340:22:79
status: VERIFIED
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PMID: 19949922 [PubMed] Cascorbi I et al: "Pharmacogenetics of ATP-binding cassette transporters and clinical implications."
No. Sentence Comment
244 0.015 c. 1322 G>A S441N 0.005 c. 1367 A>G ?
X
ABCG2 p.Ser441Asn 19949922:244:18
status: NEW
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PMID: 19949928 [PubMed] Ross DD et al: "Impact of breast cancer resistance protein on cancer treatment outcomes."
No. Sentence Comment
84 transfected seven BCRP coding region SNPs into LLC-PK1 cells, and found lower BCRP -protein expression for the Q141K and S441N alleles (84).
X
ABCG2 p.Ser441Asn 19949928:84:121
status: VERIFIED
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93 Tamura et al. used multicolor fluorescence in situ hybridization to assure uniform mRNA expression of cDNAs of seven BCRP SNPs (V12M, Q141K, F208S, S248P, F431L, S441N and F489L) transduced into Flp-In-293 cells (87, 88).
X
ABCG2 p.Ser441Asn 19949928:93:162
status: VERIFIED
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94 Protein expression from the F208S and S441N variants was found to be low; the V12M and Q141K alleles had IC50 s for SN-38 that were approximately half that of the wild-type; all the other alleles examined had significantly lower IC50 values for SN-38, mitoxantrone, doxorubicin, daunorubicin and etoposide when compared with wild type alleles (88).
X
ABCG2 p.Ser441Asn 19949928:94:38
status: VERIFIED
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PMID: 20700710 [PubMed] Wakabayashi-Nakao K et al: "Production of cells with targeted integration of gene variants of human ABC transporter for stable and regulated expression using the Flp recombinase system."
No. Sentence Comment
34 Furthermore, certain non-synonymous single nucleotide polymorphisms (SNPs), such as Q141K, F208S, and S441N, were also found to greatly affect the stability of ABCG2 in the ER and to enhance the protein degradation rate via ubiquitination and proteasomal proteolysis in Flp-In-293 cells (22-27) (Fig. 1).
X
ABCG2 p.Ser441Asn 20700710:34:102
status: VERIFIED
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226 It was of great interest to know how the inhibition of proteasomal protein degradation by MG132 affects the cellular localization of the F208S and S441N variant proteins (see Notes 5 and 6).
X
ABCG2 p.Ser441Asn 20700710:226:147
status: VERIFIED
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227 Figure 6a depicts the immunofluorescence images of Flp-In-293 cells expressing ABCG2 S441N that were incubated with or without 2 mM MG132 for 24 h.
X
ABCG2 p.Ser441Asn 20700710:227:86
status: VERIFIED
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228 In the case of the S441N 3.3.4.
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ABCG2 p.Ser441Asn 20700710:228:19
status: VERIFIED
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245 Figure 3a depicts a schematic illustration of the human ABCG2 protein to indicate the sites of amino acid alteration in the SNP variants of F208S and S441N.
X
ABCG2 p.Ser441Asn 20700710:245:151
status: VERIFIED
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247 Notes F208S, and S441N were individually expressed in Flp-In-293 cells by using the Flp recombinase system.
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ABCG2 p.Ser441Asn 20700710:247:19
status: VERIFIED
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248 As shown in Fig. 3b, mRNA levels of ABCG2 WT as well as F208S and S441N were evenly represented in Flp-In-293 cells, where the mRNA levels of ABCG2 and GAPDH were measured by RT-PCR.
X
ABCG2 p.Ser441Asn 20700710:248:66
status: VERIFIED
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249 On the other hand, ABCG2 WT, F208S, and S441N as well as GAPDH proteins were detected by immunoblotting, and their expression levels were quantified.
X
ABCG2 p.Ser441Asn 20700710:249:40
status: VERIFIED
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253 Schematic illustration of human ABCG2 as well as the expression of ABCG2 WT, F208S, and S441N in Flp-In-293 cells at the mRNA and protein levels.
X
ABCG2 p.Ser441Asn 20700710:253:88
status: VERIFIED
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254 (a) Arrows indicate the positions of amino acid substitutions (Phe208Ser and Ser441Asn) in the non-synonymous SNP variants of F208S and S441N.
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ABCG2 p.Ser441Asn 20700710:254:77
status: VERIFIED
X
ABCG2 p.Ser441Asn 20700710:254:136
status: VERIFIED
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259 (b) The mRNA level was analyzed by RT-PCR with total RNA extracted from Flp-In-293 cells expressing ABCG2 WT, F208S, or S441N.
X
ABCG2 p.Ser441Asn 20700710:259:120
status: VERIFIED
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265 Although mRNA levels were almost the same in the WT and SNP variants (F208S and S441N), protein levels of those variants were markedly decreased (Fig. 3d).
X
ABCG2 p.Ser441Asn 20700710:265:80
status: VERIFIED
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268 Figure 4a shows the effect of ME treatments on the SDS-PAGE migration of ABCG2 WT, F208S, and S441N proteins.
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ABCG2 p.Ser441Asn 20700710:268:94
status: VERIFIED
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270 Immunoblot detection of ABCG2 WT, F208S, and S441N proteins expressed in Flp-In-293 cells.
X
ABCG2 p.Ser441Asn 20700710:270:45
status: VERIFIED
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271 (a) Effect of mercaptoethanol (ME) on the status (homodimer or monomer) of ABCG2 WT and the SNP variants. Cell lysate samples (20 mg of protein) were subjected to SDS-PAGE after treatments with or without ME; and, thereafter, ABCG2 WT, F208S, and S441N proteins were detected by immunoblotting with the BXP-21 antibody, as described in Subheading 3.3.3.
X
ABCG2 p.Ser441Asn 20700710:271:247
status: VERIFIED
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272 By ME treatments, ABCG2 WT, F208S, and S441N proteins were changed from homodimers to monomers.
X
ABCG2 p.Ser441Asn 20700710:272:39
status: VERIFIED
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273 (b) Effect of Endo H or PNGase F treatments on the glycosylated status of ABCG2 WT and the SNP variants. Cell lysate samples (20 mg of protein) were treated with Endo H or PNGase F, as described in Subheading 3.3.3.ABCG2 WT, F208S, and S441N proteins in the resulting samples were analyzed by immunoblotting with the BXP-21 antibody.The apparent molecular weights of mature and non-glycosylated ABCG2 WT were 81,000 and 72,000, respectively.
X
ABCG2 p.Ser441Asn 20700710:273:236
status: VERIFIED
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280 These results provide evidence that F208S and S441N proteins form homodimers through a cysteinyl disulfide bond as does the ABCG2 WT protein.
X
ABCG2 p.Ser441Asn 20700710:280:46
status: VERIFIED
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284 On the other hand, for the S441N variant, two protein bands of ABCG2 were detected around the molecular weight of 81,000.
X
ABCG2 p.Ser441Asn 20700710:284:27
status: VERIFIED
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289 Although the major band (M.W. = 81,000) of ABCG2 WT was not at all affected by the Endo H treatment, the apparent molecular weights of the smaller protein bands of F208S (M.W. = 74,000) and S441N (M.W. = 78,000) decreased after the Endo H treatment.
X
ABCG2 p.Ser441Asn 20700710:289:218
status: VERIFIED
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292 The matured N-linked oligosaccharide of ABCG2 WT may have a structure resistant to Endo H, whereas the immature N-linked oligosaccharides of the F208S and S441N variant proteins are susceptible to this endoglycosidase.
X
ABCG2 p.Ser441Asn 20700710:292:155
status: VERIFIED
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295 Flp-In-293 cells expressing F208S or S441N were incubated in the presence of MG132 at different concentrations (0, 0.4, 2.0 mM) for 24 h, and then cell lysate samples were immediately prepared.
X
ABCG2 p.Ser441Asn 20700710:295:37
status: VERIFIED
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296 Protein expression levels of the F208S and S441N variants were determined by immunoblotting after PNGase F treatments in the same way as described above.
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ABCG2 p.Ser441Asn 20700710:296:43
status: VERIFIED
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299 After the 24-h treatment with 2 mM MG132, F208S and S441N protein levels were increased 12-and 6-fold, respectively.
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ABCG2 p.Ser441Asn 20700710:299:52
status: VERIFIED
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301 Effects of MG132 on the glycosylation status and protein levels of ABCG2 F208S and S441N variants expressed in Flp-In-293 cells.
X
ABCG2 p.Ser441Asn 20700710:301:83
status: VERIFIED
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302 (a) Flp-In-293/ABCG2 (F208S) and Flp-In-293/ABCG2 (S441N) cells were incubated with MG132 at concentrations of 0, 0.4, 2 mM for 24 h.
X
ABCG2 p.Ser441Asn 20700710:302:51
status: VERIFIED
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304 ABCG2 F208S and S441N variant proteins were analyzed by immunoblotting with the ABCG2-specific monoclonal antibody (BXP-21) either directly or after PNGase F treatment.The signal intensity of the non-glycosylated form of the ABCG2 F208S or S441N variant was measured after PNGase F treatment.The intensities are represented as ratios relative to the ABCG2 level in MG132-untreated cells.
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ABCG2 p.Ser441Asn 20700710:304:16
status: VERIFIED
X
ABCG2 p.Ser441Asn 20700710:304:240
status: VERIFIED
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308 (b) Detection of aggregated forms (M.W. > 200,000) of ABCG2 F208S and S441N variants.
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ABCG2 p.Ser441Asn 20700710:308:84
status: VERIFIED
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309 Flp-In-293/ABCG2 (F208S) and Flp-In-293/ ABCG2 (S441N) cells were incubated with MG132 at concentrations of 0, 0.4, 2 mM for 24 h.
X
ABCG2 p.Ser441Asn 20700710:309:48
status: VERIFIED
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310 Cell lysate samples (20 mg of protein) were prepared in the presence of ME.ABCG2 F208S and S441N variant proteins were prepared from MG132-treated cells as described above and analyzed by immunoblotting with the BXP-21 antibody without PNGase F treatment.
X
ABCG2 p.Ser441Asn 20700710:310:91
status: VERIFIED
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311 The aggregated forms of ABCG2 F208S and S441N are indicated by arrowheads.
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ABCG2 p.Ser441Asn 20700710:311:40
status: VERIFIED
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315 non-glycosylated form (M.W. = 72,000) for both F208S and S441N variants, where those cell lysate samples were not treated with PNGase F (Fig. 5a).
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ABCG2 p.Ser441Asn 20700710:315:71
status: VERIFIED
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316 More importantly, upon the immunoblot analysis without PNGase F treatments, aggregated forms (indicated by arrowheads in Fig. 5b) of both F208S and S441N variants were detected in the high molecular weight range of over 200,000.
X
ABCG2 p.Ser441Asn 20700710:316:149
status: VERIFIED
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318 It was of great interest to know how the inhibition of proteasomal protein degradation by MG132 affects the cellular localization of the F208S and S441N variant proteins.
X
ABCG2 p.Ser441Asn 20700710:318:147
status: VERIFIED
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319 Figure 6a depicts the immunofluorescence images of Flp-In-293 cells expressing ABCG2 S441N that were incubated with or without 2 mM MG132 for 24 h.
X
ABCG2 p.Ser441Asn 20700710:319:86
status: VERIFIED
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320 In the case of the S441N variant, MG132 treatments enhanced the localization of the ABCG2 variant protein at the plasma membrane and in intracellular compartments. By immunoelectron microscopy, we could detect ABCG2 aggresome formation adjacent to the nuclei when Flp-In-293 cells expressing the F208 variant were treated with 2 mM MG132 for 24 h (Fig. 6b).
X
ABCG2 p.Ser441Asn 20700710:320:19
status: VERIFIED
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323 Immunocytochemical staining of Flp-In-293 cells expressing ABCG2 S441N protein (a) and immunoelectron microscopic image of Flp-In-293 cells expressing ABCG2 F208S protein (b).
X
ABCG2 p.Ser441Asn 20700710:323:65
status: VERIFIED
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PMID: 20812902 [PubMed] Ni Z et al: "Structure and function of the human breast cancer resistance protein (BCRP/ABCG2)."
No. Sentence Comment
249 A systematic study of 18 natural variants of BCRP expressed in insect cells showed that the variants Q126stop, F208S, S248P, E334stop, and S441N were defective in porphyrin transport, whereas F489L displayed approximately 10% of the transport activity of wild-type BCRP [120].
X
ABCG2 p.Ser441Asn 20812902:249:139
status: VERIFIED
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PMID: 21103975 [PubMed] Meyer zu Schwabedissen HE et al: "In vitro and in vivo evidence for the importance of breast cancer resistance protein transporters (BCRP/MXR/ABCP/ABCG2)."
No. Sentence Comment
254 Reduced transport activity was also demonstrated for the c.1322G>A (p.S441N, AF 0.001 in Japanese population) variant.
X
ABCG2 p.Ser441Asn 21103975:254:70
status: VERIFIED
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PMID: 21184741 [PubMed] Sugiyama T et al: "Posttranslational negative regulation of glycosylated and non-glycosylated BCRP expression by Derlin-1."
No. Sentence Comment
29 Moreover, the certain single nucleotide polymorphism (SNP) variants of BCRP (Q141K, F208S and S441N), which protein expression was markedly low despite the functional expression of mRNA, were also degraded by ERAD [10,11].
X
ABCG2 p.Ser441Asn 21184741:29:94
status: VERIFIED
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162 These include naturally occurring SNPs variants of BCRP such as Q141K, F208S and S441N [10,11].
X
ABCG2 p.Ser441Asn 21184741:162:81
status: VERIFIED
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PMID: 21188243 [PubMed] Ishikawa T et al: "Key Role of Human ABC Transporter ABCG2 in Photodynamic Therapy and Photodynamic Diagnosis."
No. Sentence Comment
167 Based on the currently available data on SNPs and acquired mutations, we have created a total of 18 variant forms of ABCG2 (V12M, G51C, Q126stop, Q141K, T153M, Q166E, I206L, F208S, S248P, E334stop, F431L, S441N, R482G, R482T, F489L, F571I, N590Y, and D620N) by site-directed mutagenesis and expressed them in insect cells [41, 90].
X
ABCG2 p.Ser441Asn 21188243:167:205
status: NEW
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168 The variants Q126stop, F208S, S248P, E334stop, and S441N are defective in the transport of hematoporphyrin (Figure 4(b)).
X
ABCG2 p.Ser441Asn 21188243:168:51
status: NEW
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170 Flp-In-293 cells expressing the F208S, S248P, S441N, and F489L variants were sensitive to light when cells were treated with pheophorbide a.
X
ABCG2 p.Ser441Asn 21188243:170:46
status: NEW
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177 Gefitinib and imatinib are new anticancer drugs Outside Plasma membrane Inside H2N COOH V12M G51C Q126stop Q141K T153M R160Q Q166E I206L F208S S248P E334stop F431L F489L S441N R482G R482T F571I R575stop N590Y D620N T542A A528T D296H P269S ATP-binding cassette (a) 0 0.1 0.3 0.4 0.2 0.5 Mock WT V12M G51C Q126stop Q141K T153M Q166E I206L F208S S248P E334stop F431L S441N F489L F571I N590Y D620N R482G R482T ATP-dependenthematoporphyrin transport(nmol/min/mgprotein) (b) Figure 4: (a) Schematic illustration of human ABCG2 and its nonsynonymous polymorphisms.
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ABCG2 p.Ser441Asn 21188243:177:172
status: NEW
X
ABCG2 p.Ser441Asn 21188243:177:366
status: NEW
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PMID: 21567408 [PubMed] Nakagawa H et al: "Ubiquitin-mediated proteasomal degradation of ABC transporters: a new aspect of genetic polymorphisms and clinical impacts."
No. Sentence Comment
155 Effect of Mutations and Nonsynonymous SNPs on Protein Trafficking, Maturation, or ERAD of ABC Transporters Protein AA Mutation/SNP Effect on Protein Reference ABCA1 W590S Mutation Functional defect 115 R587W Mutation Impaired glycol processing 115 Q597R Mutation Impaired glycol processing, ERAD 115,116 Y1532C Mutation Altered protein trafficking 117 R1925Q Mutation Altered protein trafficking 118 ABCA3 R43L Mutation Altered protein trafficking 119 L101P Mutation Altered protein trafficking 119 R280C Mutation Altered protein trafficking 119 ABCA4 L541P Mutation Mislocalization 120 R602W Mutation Mislocalization 120 A1038V Mutation Mislocalization 120 C1490Y Mutation Mislocalization 120 ABCB1a G268V Mutation ERAD 121 G341C Mutation ERAD 121 I1196S Mutation Reduced glycosylation 122 ABCB4 I541F Mutation Accumulation in ER 123 ABCB11a E135K Mutation Reduced level of mature protein 124 L198P Mutation Reduced level of mature protein 124 E297G Mutation Reduced level of mature protein 124 L413W Mutation Reduced level of mature protein 124 R432T Mutation Reduced level of mature protein 124 D482G Mutation Immature protein in ER 124,125 N490D Mutation Reduced level of mature protein 124 A570T Mutation Reduced level of mature protein 124 T655I Mutation Reduced level of mature protein 124 Y818F SNP Moderate reduction of protein 124 G982R Mutation Retention in ER 125 R1153C Mutation ERAD 125 R1286Q Mutation Retention in ER 125 ABCC2a R768W Mutation Impaired protein trafficking 126 I1173F Mutation Impaired protein maturation 127 R1392 Mutation Impaired protein maturation 128 M1393 Mutation Impaired protein maturation 129 ABCC4a E757K SNP Altered protein trafficking 23 ABCC7 F508 Mutation Misfolding, ERAD 36-39,130 G85E Mutation Impaired protein maturation 130-132 G91R Mutation Impaired protein maturation 130-132 N1303K Mutation Impaired protein maturation 130-132 ABCC8 WT Wild type Ubiquitin-proteasome degradation 133 A116P Mutation Ubiquitin-proteasome degradation 133 V187D Mutation Ubiquitin-proteasome degradation 133 F1388 Mutation Impaired protein trafficking 134 L1544P Mutation Impaired protein trafficking 135,136 ABCC11a G180R SNP Ubiquitin-proteasome degradation 50 27 Mutation Ubiquitin-proteasome degradation 50 ABCG2a V12M SNP Altered protein localization 96 Q141K SNP Ubiquitin-proteasome degradation 102 F208S SNP Ubiquitin-proteasome degradation 78,99 S441N SNP Ubiquitin-proteasome degradation 78,99 Mutations of ABCA1, ABCA3, ABCA4, ABCB4, ABCB11, ABCC2, ABCC7 (CFTR), and ABCC8 are associated with Tangier disease, fatal surfactant deficiency, Stargardt disease, progressive familial intrahepatic cholestasis type 3 (PFIC-3), progressive familial intrahepatic cholestasis type 2 (PFIC-2), Dubin-Johnson syndrome, cystic fibrosis, and familial hyperinsulinism, respectively.
X
ABCG2 p.Ser441Asn 21567408:155:2388
status: NEW
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76 Furthermore, the nonsynonymous SNPs of Q141K, F208S, and S441N (Fig. 4) have been found to greatly affect APCG2 protein levels in the plasma membrane.
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ABCG2 p.Ser441Asn 21567408:76:57
status: NEW
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78 Q141K (Gln141Lys), F208S (Phe208Ser), and S441N (Ser441Asn) are nonsynonymous SNPs that cause the reduced expression of ABCG2 protein.
X
ABCG2 p.Ser441Asn 21567408:78:42
status: NEW
X
ABCG2 p.Ser441Asn 21567408:78:49
status: NEW
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118 Impact of SNPs on Protein Stability and ERAD of ABCG2 By functional validation in vitro, the above-mentioned 17 nonsynonymous polymorphisms of ABCG2 were classified into four groups.99 The nonsynonymous SNP variants Q126stop, F208S, S248P, E334stop, S441N, and F489L were defective in the active transport of methotrexate and hematoporphyrin.100 The F208S, S248P, F431L, S441N, and F489L variants, on the contrary, exhibited greatly reduced protein expression levels and drug resistance profiles.99 In particular, expression levels of the F208S and S441N variant proteins were markedly low.99 These variant proteins do not undergo Golgi apparatus-mediated glycoprocessing but are passed through the ERAD pathway.78 The immature and nonglycosylated forms of F208S and S441N (Fig. 6a) were detected.
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ABCG2 p.Ser441Asn 21567408:118:250
status: NEW
X
ABCG2 p.Ser441Asn 21567408:118:371
status: NEW
X
ABCG2 p.Ser441Asn 21567408:118:549
status: NEW
X
ABCG2 p.Ser441Asn 21567408:118:767
status: NEW
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119 When Flp-In-293/ABCG2 (F208S) and Flp-In-293/ABCG2 (S441N) cells were treated with MG132 for 24 h, the protein levels of F208S and S441N variants were greatly enhanced (Fig. 6a).
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ABCG2 p.Ser441Asn 21567408:119:52
status: NEW
X
ABCG2 p.Ser441Asn 21567408:119:131
status: NEW
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128 Effects of MG132 on the glycosylation status and protein levels of ABCG2 F208S, and S441N variants expressed in Flp-In-293 cells.
X
ABCG2 p.Ser441Asn 21567408:128:84
status: NEW
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129 (a) Flp-In-293 cells expressing ABCG2 F208S or S441N variants were incubated with MG132 at concentrations of 0, 0.4, and 2 :M for 24 h. Cell lysate samples (20 :g of protein) were prepared in the presence of 2-mercaptethanol (ME).
X
ABCG2 p.Ser441Asn 21567408:129:47
status: NEW
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130 ABCG2 F208S, and S441N variant proteins were analyzed by immunoblotting with the ABCG2- specific monoclonal antibody (BXP-21) either directly or after PNGase F treatment. The signal intensity of the nonglycosylated form of the ABCG2 F208S or S441N variant was measured after PNGase F treatment. The intensities are represented as ratios relative to the ABCG2 level in MG132-untreated cells. Data are expressed as mean values ± SD in triplicate experiments (* p < 0.05).
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ABCG2 p.Ser441Asn 21567408:130:17
status: NEW
X
ABCG2 p.Ser441Asn 21567408:130:242
status: NEW
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133 (b) Detection of aggregated forms (MW > 200,000) of ABCG2 F208S and S441N variants.
X
ABCG2 p.Ser441Asn 21567408:133:68
status: NEW
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134 Flp-In-293/ABCG2 (F208S) and Flp-In-293/ ABCG2 (S441N) cells were incubated with MG132 at concentrations of 0, 0.4, and 2 :M for 24 h. Cell lysate samples (20 :g of protein) were prepared in the presence of ME.
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ABCG2 p.Ser441Asn 21567408:134:48
status: NEW
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135 ABCG2 F208S and S441N variant proteins were prepared from MG132-treated cells and analyzed by immunoblotting with the BXP-21 antibody without PNGase F treatment. The aggregated forms of ABCG2 F208S and S441N are indicated by arrowheads.
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ABCG2 p.Ser441Asn 21567408:135:16
status: NEW
X
ABCG2 p.Ser441Asn 21567408:135:202
status: NEW
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PMID: 20103563 [PubMed] Klaassen CD et al: "Xenobiotic, bile acid, and cholesterol transporters: function and regulation."
No. Sentence Comment
6589 Absent C421A Q141K 2 Normal/reduced G445C A149P ↔ Normal G448A R163K ↔ Normal C496G Q166E ↔ Normal/reduced A616C I206L 2↔ Normal T623C F208S N.D. Reduced T742C S248P N.D. Normal C805T P269S 2↔ Normal T1291C F431L 2 Normal/reduced G1322A S441N 2 Reduced T1465C F489L 2↔ Normal/reduced A1768T N590Y 2↔ Increased G1858A D620N 2↔ Normal 2, reduced function; ↔, no change in function; N.D. not determined.
X
ABCG2 p.Ser441Asn 20103563:6589:272
status: NEW
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PMID: 16180115 [PubMed] Ito K et al: "Apical/basolateral surface expression of drug transporters and its role in vectorial drug transport."
No. Sentence Comment
212 Kondo et al. (119) also examined the cellular localization of a total of seven SNP variants of BCRP (V12M, Q141K, A149P, R163K, Q166E, P269S, and S441N) in LLC-PK1.
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ABCG2 p.Ser441Asn 16180115:212:146
status: NEW
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213 As a result, reduced protein expression levels of Q141K and S441N were observed compared with the wild-type BCRP.
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ABCG2 p.Ser441Asn 16180115:213:60
status: NEW
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PMID: 22248732 [PubMed] Natarajan K et al: "Role of breast cancer resistance protein (BCRP/ABCG2) in cancer drug resistance."
No. Sentence Comment
3488 Recently, evidence was presented that polymorphisms resulting in the variants F208S and S441N cause diminished BCRP protein levels by virtue of ubiquitin-mediated proteasomal degradation [100].
X
ABCG2 p.Ser441Asn 22248732:3488:88
status: NEW
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PMID: 22081364 [PubMed] Plante I et al: "Rosuvastatin blocks hERG current and prolongs cardiac repolarization."
No. Sentence Comment
24 Transfection Procedure In order to evaluate the effects of different transporters on the block of hERG by rosuvastatin, the hERG-stably transfected HEK 293 cells were transiently transfected with 10 :g of a recombinant pIRES2 vector expressing the green fluorescent protein (GFP) and one or the other of the following transporters: efflux transporter BCRP (strong affinity for rosuvastatin), loss of function variants of BCRP (BCRP-F208S, BCRP-S441N, and BCRP-Q141K), the influx transporters OATP2B1 (strong affinity for rosuvastatin), and multidrug resistance gene (MDR1) (an efflux transporter showing weak affinity for rosuvastatin).
X
ABCG2 p.Ser441Asn 22081364:24:444
status: NEW
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28 Site-Directed Mutagenesis The three loss-of-function variants of BCRP (BCRP-F208S, BCRP-S441N, and BCRP-Q141K) were Figure 1.
X
ABCG2 p.Ser441Asn 22081364:28:88
status: NEW
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88 Then, we performed site-directed mutagenesis on BCRP and produced three variants associated with a loss of function of the protein: C421A (Q141K), T623C (F208S), and G1322A (S441N).34-36 The coexpression of hERG with one or the other of these variants blunted the effects observed with the native efflux transporter BCRP, that is, the block was in the order of 40%.
X
ABCG2 p.Ser441Asn 22081364:88:174
status: NEW
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89 Indeed, inhibition of hERG was 40 ± 4 (n = 5), 41 ± 7 (n = 7), and 41 ± 4 (n = 7) for Q141K, F208S, and S441N, respectively (all not different from control, but different from HEK 293-hERG cells with functional transporters; p < 0.05).
X
ABCG2 p.Ser441Asn 22081364:89:119
status: NEW
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111 Inhibition of current activity was also determined in cells expressing transporters with a loss of function in BCRP activity due to mutations (BCRP-F208S, BCRP-S441N, and BCRP-Q141K).
X
ABCG2 p.Ser441Asn 22081364:111:160
status: NEW
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138 We also tested the effects of rosuvastatin on hERG in the presence of three loss-of-function polymorphisms of BCRP (Q141K, F208S, and S441N) and observed a block comparable to the one found in the control cells (≈42%).
X
ABCG2 p.Ser441Asn 22081364:138:134
status: NEW
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PMID: 22132966 [PubMed] Matsuo H et al: "ABCG2/BCRP dysfunction as a major cause of gout."
No. Sentence Comment
38 1119 ABCG2 : ATP binding casse e G2 SNP : single nucleo de polymorphism QTL : quan ta ve trait locus OR : odds ra o ABCG2 as a urate secre on transporter in humans Gene c analysis Func onal analysis ABCG2 muta on analysis of 90 hyperuricemic cases (all coding regions) ABCG2 muta ons (with amino acid altera ons) 6 muta ons c d Func onal analysis of urate transport via wild type ABCG2 (vesicle studies) a Iden fica on of urate transport ac vi es via ABCG2 b Func onal analysis of urate transport via mutated ABCG2 6 mutants e No effect (V12M) g Dysfunc onal genotype combina ons of ABCG2 as major causes of gout q Dysfunc onal SNP with high frequency (>30%) (Q141K) QTL analysis in 739 Japanese individuals h i j n Gout / hyperuricemia with ABCG2 homozygous, n = 2 heterozygous, n = 24 Loss of func on (Q126X, G268R, S441N, F506Sfs) Reduced func on (~50%) (Q141K) f p Genotype combina on analysis 10.1% of gout with ≤1/4 ABCG2 func on OR = 25.8, p = 3.39×10-21 o Haplotype analysis 13.5% of gout with disease haplotype OR = 5.97, p = 4.10×10-12 Associa on analysis of hyperuricemia (Q126X) OR = 3.61, p = 2.91× 10-7 l m Associa on analysis of gout (Q126X) OR = 4.25, p =3.04 × 10-8 Genotyping of nonfunc onal SNP (Q126X) hyperuricemia, n=228 k FIGURE 1 Flowchart for molecular-function-based clinicogenetic (FBCG) analysis of gout patients with ABCG2 polymorphic variants.
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ABCG2 p.Ser441Asn 22132966:38:820
status: NEW
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53 Using the site-directed mutagenesis technique, we constructed ABCG2 mutants (V12M, Q126X, Q141K, G268R, S441N, and F506SfsX4), which were used for urate transport analysis, on the expression vector for ABCG2.
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ABCG2 p.Ser441Asn 22132966:53:104
status: NEW
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65 The following six nonsynonymous mutations, including three SNPs, were found: V12M, Q126X, Q141K, G268R, S441N, and F506SfsX4 (Figure 2A).
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ABCG2 p.Ser441Asn 22132966:65:104
status: NEW
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79 Among six mutants, ATP-dependent urate transport was reduced by approximately half (46.7%) in one mutant, Q141K, and was nearly eliminated in four mutants, Q126X, G268R, S441N, and F506SfsX4 (Figure 2B).
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ABCG2 p.Ser441Asn 22132966:79:170
status: NEW
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PMID: 22132963 [PubMed] Matsuo H et al: "Identification of ABCG2 dysfunction as a major factor contributing to gout."
No. Sentence Comment
36 Using the site-directed mutagenesis technique, we constructed mutants of ABCG2 (V12M, Q126X, Q141K, G268R, S441N, and F506SfsX4), which were used for urate transport analysis, on the expression vector for ABCG2.
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ABCG2 p.Ser441Asn 22132963:36:107
status: NEW
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45 The following six non-synonymous mutations, V12M, Q126X, Q141K, G268R, S441N, and F506SfsX4, were found (Figure 1A), and the first three mutations were SNPs.
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ABCG2 p.Ser441Asn 22132963:45:71
status: NEW
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52 The ATP-dependent transport of urate was reduced by approximately half (46.7%) in Q141K and was nearly eliminated in Q126X, G268R, S441N, and F506SfsX4 mutants (Figure 1B).
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ABCG2 p.Ser441Asn 22132963:52:131
status: NEW
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PMID: 22132962 [PubMed] Nakayama A et al: "ABCG2 is a high-capacity urate transporter and its genetic impairment increases serum uric acid levels in humans."
No. Sentence Comment
47 We found the following six nonsynonymous mutations: V12M, Q126X, Q141K, G268R, S441N, and F506SfsX4, and the first three mutations are SNPs.
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ABCG2 p.Ser441Asn 22132962:47:79
status: NEW
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PMID: 21554546 [PubMed] Woodward OM et al: "ABCG transporters and disease."
No. Sentence Comment
59 R L L A A M AT T T R V S G G G F I T Q R R V K K S G E A D RR V V K K L L G E E E I IN NN D H Q Q R V V V V V L L S G F E N M TT QD D S K R V K L L G F P C Y R K S G F P P C N N A V L L S G G G I N A D R K P P S GG G R V VK K KK L L L LL L S S S GG G PPE E IIII N NN M A A A T D D Y N E A I P E S I D L L F T LS G EI MT D I I P FC L R IH A N T T T T T G L D S S K K K L L L S G G G F F F F Q P P I M M A A A A D H G G LS S S V L L L L L R R RQ Q I I Y Y YS S HE E A T V V V V L Q I S F I I II A A L G G Y K F R S S E E I I L G Y YY Y V V K H S P C M M D R T I II L L L F F YV S S P F N T I A Q Q L L L G F Y Y H S S PR W C N M I I A A A L L G F V V K H W T L I F F C C C D D D A A A QQ Q Q Q G G G G G G G G G G FF FF F F FF Y Y Y Y Y V V V V V VVV K KKK KK K K E E E E P P P P R W W TT TT T TT T T NNNN N N N N N M MM M L L L L L L L L LL LL I I I I I I AA A A A A A S S S S S S S S SS L L L L LL L L LL V V F G GCC T Q Q Q Q Y Y Y KK K K K H H EE E E E E EEE E P P P P R R RW N N N II I I I I I I A AAA A A A S SS S S S S L L LL L L L V V V V F F F F F F F G GG G C TT T T T T K K K K KKKK N NN LL D DDD DS S 395 469 565 644 414 450 495 505 584 625 Signature Walker A WalkerBQ EP MI A V V VF FG GTN N NS S S S P F HE V FG CTT K NN LLD SS AAA I V12M N-terminus C-terminus M MM MM T A A A A L F F Y V V S S S F 524476 Y Q126X G268R S441N F506fs Q141K 44 288 PP AA DD Fig. 2.
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ABCG2 p.Ser441Asn 21554546:59:1332
status: NEW
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PMID: 20368174 [PubMed] Matsuo H et al: "Common defects of ABCG2, a high-capacity urate exporter, cause gout: a function-based genetic analysis in a Japanese population."
No. Sentence Comment
46 The following six nonsynonymous mutations were found: V12M, Q126X, Q141K, G268R, S441N, and F506SfsX4 (Table 1).
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ABCG2 p.Ser441Asn 20368174:46:81
status: NEW
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52 ATP-dependent transport of urate was reduced by approximately half (46.7%) in Q141K and was nearly eliminated in Q126X, G268R, S441N, and F506SfsX4 mutants (Fig. 2B).
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ABCG2 p.Ser441Asn 20368174:52:127
status: NEW
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77 The call rate, or the ability of the SNP to be reliably decoded, for V12M, Q126X, and LS N N SV FLC S P T AN FK G LM ETS S E V F I P Q G N T N G FV P A A AS LD V S N I C Y R V K K RKPVEKEILSNINGIKPGLNAILGPG GGKSSL LDVLA ARKDP S G T L S G D V L I G A P PR A N F K N S G Y Q D D V V M G T L T V R NE LV VC H Q F S A A A RL L T T TNEKNER HINRVIQELGLDKVADSKVGTQFIRGVG GERR KTSIGME L I T D P S I L F L D E P T T G L D S S T A N A V LL L L K R M S K Q G R I I F S T S I H Q P R Y M S I F K LFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAN YN T V A L N R E E D F K A T E II E P S K Q D K L I E L A EK I Y V N S S F Y K ETKAELHQLSGGEKKKKITVFKEISYTTSFCHQRWVK SRS AFFLDII N G D S A PD P L F K N LL G N P Q A S A I V G I I T L V A FI I Q V V L G Y AVEFLKNDST G I Q N R A G V L F F L T T Q C F S L V S S N G L S L M L I T P M S F I FV D L R P I C Y W L W Y I Y T Q S R F L NQ S L F P G A H E F Y S Y S E F R G Y I K V K S V Y I H L E V A S S V L M A A M F V A F M S Y M T M F K A T I M L H F I A V K G W I L V C A N L W V A T L M T C F VI F M M I F S G L L VNLTTIASAIAAGQS L S V V LKGL L F N Q L F P S L D Y G Q K V L C Y EEGTCTAYNCPNNGTAN G P G L K L L L K K SYF L Y D L G L M A P K Extracellular Intracellular 50 150 200 300 100 350 395 415 469 450 470 500 525 550 565 585 600 625 608 650 250 655 603 475 644 F506SfsX4 (F506fs) V12M Q126X Q141K S441N G268R V Q F S G Q # C signature Walker B motif Walker A motif C D E 4.0 4.5 5.0 5.5 6.0 C/C C/A A/A Male + female P= 2.02 x 10 -6 5.0 5.5 6.0 6.5 7.0 C/C C/A A/A Male P= 0.0144 Serumuric acid(mg/dl) 4.0 4.5 5.0 5.5 6.0 C/C C/A A/A Female P= 0.0137 (pmol/mgprotein) 0 20 40 60 80 100 120 140 160 180 200 + AMP + ATP B Serumuric acid(mg/dl) Serumuric acid(mg/dl) A [C]Uratetransport 14 G F M C-terminal N-terminal Fig. 2.
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ABCG2 p.Ser441Asn 20368174:77:1323
status: NEW
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89 Amino acid change SNP ID dbSNP (NCBI) Exon Type of mutation Number of hyperuricemia patients Allele frequency (%) (in hyperuricemia) Allele frequency* (%) (in Japanese population) Wild-type Heterozygote Homozygote Q141K rs2231142 5 Missense 29 47 14 41.67 31.9 V12M rs2231137 2 Missense 64 23 3 16.11 19.2 Q126X 4 Nonsense 80 10 0 5.56 2.8 G268R 7 Missense 89 1 0 0.56 N.D. S441N 11 Missense 89 1 0 0.56 0.3 F506SfsX4 13 Frameshift 89 1 0 0.56 0.3 * Data from Maekawa et al. (34).
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ABCG2 p.Ser441Asn 20368174:89:374
status: NEW
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181 Using the site-directed mutagenesis technique, we constructed mutants of ABCG2 (V12M, Q126X, Q141K, G268R, S441N, and F506SfsX4), which were used for urate transport analysis, on the expression vector for ABCG2.
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ABCG2 p.Ser441Asn 20368174:181:107
status: NEW
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PMID: 16815813 [PubMed] Choudhuri S et al: "Structure, function, expression, genomic organization, and single nucleotide polymorphisms of human ABCB1 (MDR1), ABCC (MRP), and ABCG2 (BCRP) efflux transporters."
No. Sentence Comment
573 Recently, Kondo et al. (2004) reported the effect of single nucleotide polymorphisms (SNPs) in ABCG2 gene on its localization, expression level, and transport activity of the BCRP protein. The cellular localization was identified using the wild-type and seven different SNP variants of BCRP protein (Val12Met, Gln141Lys, Ala149Pro, Arg163Lys, Gln166Glu, Pro269Ser, and Ser441Asn), following their expression in LLC-PK1 cells.
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ABCG2 p.Ser441Asn 16815813:573:369
status: NEW
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575 The authors concluded that Gln141Lys variant of the BCRP protein may be associated with a lower expression level, and Ser441Asn variant may lower both the expression level and cellular localization.
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ABCG2 p.Ser441Asn 16815813:575:118
status: NEW
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PMID: 25036722 [PubMed] Szafraniec MJ et al: "Determinants of the activity and substrate recognition of breast cancer resistance protein (ABCG2)."
No. Sentence Comment
201 To elucidate the significance of this polymorphism for porphyrin transport, a set of 18 variants of BCRP (Val12 Met, Gly51 Cys, Gln126 stop, Gln141 Lys, Thr153 Met, Gln166 Glu, Ile206 Leu, Phe208 Ser, Ser248 Pro, Glu334 stop, Phe431 Leu, Ser441 Asn, Arg482 Gly, Arg482 Thr, Phe489 Leu, Phe571 Ile, Asn590 Tyr and Asp620 Asn) have been expressed in insect cells.
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ABCG2 p.Ser441Asn 25036722:201:238
status: NEW
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209 Position Type of mutation Effect on the transporter References NBD Lys 86 Met (i) No stimulation of the ATPase activity by prazosin; (ii) no influence on the transport of mitoxantrone Henriksen et al. (2005b) Glu 126 stop, Phe 208 Ser, Ser 248 Phe, Glu 334 stop Inability to transport hematoporphyrin Tamura et al. (2006) Glu 211 Gln Complete abolishment of the ATPase activity and methotrexate transport Hou et al. (2009) Pro 392 Ala Significant reduction in the efflux activity of mitoxantrone, BODIPY-prazosin and Hoechst 33342 Ni et al. (2011) TM1 Gly 406 Ala Gly 410 Ala No influence on the activity of the transporter Polgar et al. (2004) Gly 406 Leu Gly 410 Leu (i) Loss of the ability to transport rhodamine123; (ii) impaired transport of mitoxantrone, Pheide and BODIPY-prazosin Polgar et al. (2004) Extracellular loop 1 Phe 431 Leu (i) Loss of the ability to transport methotrexate; (ii) 10% level of hematoporphyrin transport compared to the WT protein Tamura et al. (2006) Ser 441 Asn Inability to transport hematoporphyrin Tamura et al. (2006) Ser 441 Asn Loss of the ability to transport methotrexate Tamura et al. (2006) TM2 Lys 452 Ala His 457 Ala Increase in transport of mitoxantrone, BODIPY-prazosin and Hoechst 33342 Cai et al. (2010) Lys 453 Ala Arg 465 Ala Decrease in transport of mitoxantrone, BODIPY-prazosin, Hoechst 33342, doxorubicin, SN-38 and rhodamine 123 Cai et al. (2010) TM3 Arg 482 Gly Arg 482 Thr (i) No change in the inhibitory activity of lapatinib; (ii) about two times greater inhibition by ritonavir, saquinavir and nalfinavir than in the WT variant; (iii) gaining the ability to transport rhodamine123 and doxorubicin; (iv) no influence on the transport of mitoxantrone; (v) loss of the ability to transport methotrexate Dai et al. (2008), Gupta et al. (2004), Honjo et al. (2001), Mitomo et al. (2003) Arg 482 Thr (i) Lower IC 50 of cyclosporine A for mutant than for WT variant; (ii) lower elacridar inhibition potency Xia et al. (2007) Arg 482 Lys Complete loss of transport activity Ejendal et al. (2006) Phe 489 Leu Impaired transport of porphyrins, no transport of methotrexate Tamura et al. (2006) Extracellular loop 3 Asn 590 Tyr Over twice reduced transport of mitoxantrone, topotecan, daunorubicin and rhodamine 123 Vethanayagam et al. (2005) Cys 592 Ala/Cys 608 Ala (i) Transport of mitoxantrone almost unchanged; (ii) transport of BODIPY-prazosin significantly impaired Henriksen et al. (2005a) Extracellular loop 3 Cys 603 Ser Cys 592 Ser/Cys 608 Ser Cys 592 Ser/Cys 603 Ser/Cys 608 Ser Diminished susceptibility to the inhibitory activity of fumitremorgin C Shigeta et al. (2010) Cys-less Arg 482 Gly-BCRP Complete loss of the ability to efflux mitoxantrone Liu et al. (2008b) The positions of the amino acid residues refer to the topological model of BCRP proposed by Wang et al. (2009).
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ABCG2 p.Ser441Asn 25036722:209:985
status: NEW
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ABCG2 p.Ser441Asn 25036722:209:1057
status: NEW
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