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PMID: 19734299
Comer DM, Ennis M, McDowell C, Beattie D, Rendall J, Hall V, Elborn JS
Clinical phenotype of cystic fibrosis patients with the G551D mutation.
QJM. 2009 Nov;102(11):793-8. Epub 2009 Sep 4.,
[PubMed]
Sentences
No.
Mutations
Sentence
Comment
10
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:10:182
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:10:347
status:
NEW
view ABCC7 p.Arg117His details
Conclusions: Mutations on different chromosomes are not independent of each other for the overall impact on the amount of functional CFTR. This study suggests that patients with the
G551D
mutation and a second severe mutation have a milder clinical phenotype than F508del homozygous patients, but the phenotype is not as mild as patients with the
R117H
mutation.
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20
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:20:197
status:
NEW
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ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:20:277
status:
NEW
view ABCC7 p.Gly551Asp details
Furthermore, the high degree of clinical variability for any given mutation (as illustrated by CF siblings) supports the concept that factors in addition to CFTR function alone are important.4 The
G551D
(Glycine to Aspartate change in nucleotide 1784 in exon 11) mutation is a
Gly to Asp substitution at amino acid position 551
.
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21
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:21:69
status:
NEW
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ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:21:429
status:
NEW
view ABCC7 p.Gly551Asp details
There is considerable current interest in treating patients with the
G551D
mutation with drugs that potentiate its function.5,6 These pharmacological agents have shown promise in phase 2 clinical trials leading to changes in nasal potential difference and improved lung function.7 The prevalence of this particular mutation is high in Northern Ireland.8 Data on whether the phenotype of patients with compound heterozygocity for
G551D
differs from patients with F508del (Deletion phenylalanine in codon 508 in chromosome 7) homozygous mutations are divergent.
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22
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:22:36
status:
NEW
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ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:22:246
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:22:375
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:22:584
status:
NEW
view ABCC7 p.Gly551Asp details
No difference was shown between the
G551D
mutation and the F508del mutation for age at diagnosis, sweat chloride, measures of nutritional status, lung function, Pseudomonas aeruginosa infection and exocrine pancreatic function.9 At an early age,
G551D
patients had pancreatic insufficiency (PI).10 In contrast, a case study of two CF patients, who were heterozygous with the
G551D
mutation and a second severe mutation, showed a mild pulmonary and intestinal phenotype.8 More recently in a large study of the 11 most common CF mutations using US CF Registry data, the severity of the
G551D
mutation was similar to F508del for lung function, exocrine pancreatic status and P. aeruginosa infection but significant differences for age at diagnosis, sweat chloride, height and weight were demonstrated.
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23
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:23:65
status:
NEW
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ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:23:177
status:
NEW
view ABCC7 p.Gly551Asp details
There was a nonsignificant trend towards better survival for the
G551D
/F508del patients than homozygotes for F508del.11 In this study, we hypothesized that CF patients with the
G551D
mutation would have less severe disease than those F508del homozygotes.
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24
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:24:71
status:
NEW
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ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:24:181
status:
NEW
view ABCC7 p.Arg117His details
To address this, we compared the clinical phenotype of patients with a
G551D
mutation, a Class 3 mutation, with patients homozygous for F508del and those with the missense mutation
R117H
(Arginine to histidine mutation of residue 117), a Class 2 and 4 mutation, respectively.
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25
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:25:14
status:
NEW
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Including the
R117H
mutation, a missense mutation in exon 4 and the most common mutation in its class, allowed a comparison across three groups to be established.
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26
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:26:31
status:
NEW
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ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:26:41
status:
NEW
view ABCC7 p.Arg117His details
Compound heterozygotes for the
G551D
and
R117H
were studied as a separate group.
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30
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:30:63
status:
NEW
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ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:30:194
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:30:263
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:30:107
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:30:141
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:30:253
status:
NEW
view ABCC7 p.Arg117His details
Group 1 included F508del homozygote patients, Group 2 with the
G551D
on either chromosome (and without the
R117H
mutation), Group 3 with the
R117H
mutation on either chromosome (and without the
G551D
mutation) and Group 4 compound heterozygotes for the
R117H
and
G551D
mutation.
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36
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:36:103
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:36:205
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:36:158
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:36:199
status:
NEW
view ABCC7 p.Arg117His details
Results Group 1 (F508del homozygote patients) included 61 patients, Group 2 (patients heterozygous for
G551D
) 13 patients, Group 3 (patients heterozygous for
R117H
) 23 patients and Group 4 (compound
R117H
/
G551D
patients) 4 patients.
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39
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:39:25
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:39:41
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:39:75
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Glu60*
X
ABCC7 p.Glu60* 19734299:39:82
status:
NEW
view ABCC7 p.Glu60* details
Two patients in Group 2 (
G551D
/621+1G!T,
G551D
/3659delC) and 1 in Group 3 (
R117H
/
E60X
) were heterozygous with a CFTR mutation other than F508del.
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54
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:54:78
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:54:88
status:
NEW
view ABCC7 p.Arg117His details
Discussion Comparing F508del homozygous CF patients to those heterozygous for
G551D
and
R117H
, we have shown that the latter two groups individually have better lung function, slower rate of decline in FEV1, older age at diagnosis, better nutritional status, reducing infection with P. aeruginosa and B. cepacia complex, reduced burden of care and improved pancreatic status and glucose tolerance.
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55
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:55:142
status:
NEW
view ABCC7 p.Gly551Asp details
McKone et al.`s study, in contrast to our data, showed no significant difference in pancreatic status and FEV1 for those heterozygous for the
G551D
mutation compared with the F508del homozygous patients.
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56
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:56:122
status:
NEW
view ABCC7 p.Gly551Asp details
The trend for reduced infection with P. aeruginosa and the statistically better nutritional status that we have shown for
G551D
patients compared to F508del homozygous is in keeping with McKone et al.`s findings.
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60
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:60:60
status:
NEW
view ABCC7 p.Gly551Asp details
Recent interest in drugs that potentiate CFTR expression in
G551D
patients and the inconsistency in previous reports as to the overall severity of this particular phenotype make further study important.
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61
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:61:4
status:
NEW
view ABCC7 p.Arg117His details
The
R117H
mutation is commonly associated with the genetic polymorphism of the polypyrimidine tract in intron 8 giving rise to variable amounts of functional CFTR. This polymorphism exists on an intron-8 polythymidine sequence (IVS8) as a 5-, 7- or 9-thymidine (T) variant.
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62
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:62:126
status:
NEW
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ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:62:143
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:62:160
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:62:211
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:62:179
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:62:196
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:62:217
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Glu60*
X
ABCC7 p.Glu60* 19734299:62:202
status:
NEW
view ABCC7 p.Glu60* details
These alleles cause intron Table 1 Genotype details of the 101 CF patients Group Genotype Patients (n) 1 F508del/F508del 61 2
G551D
/F508del 11
G551D
/621+1G!T 1
G551D
/3659delC 1 3
R117H
/F508del 22
R117H
/
E60X
1 4
G551D
/
R117H
4 8 to be incorrectly spliced leading to mRNA lacking exon 9 and so a reduced amount of normal CFTR transcript.
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63
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:63:0
status:
NEW
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ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:63:92
status:
NEW
view ABCC7 p.Arg117His details
R117H
with the 5T variant are most severely affected.3 Each mutation, the missense mutation
R117H
in exon 4 and the 5T polymorphism in intron 8, have a mild phenotypic effect unless they are present on the same chromosome.
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65
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:65:138
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:65:257
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:65:258
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:65:287
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:65:288
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117Cys
X
ABCC7 p.Arg117Cys 19734299:65:308
status:
NEW
view ABCC7 p.Arg117Cys details
ABCC7 p.Arg117Cys
X
ABCC7 p.Arg117Cys 19734299:65:309
status:
NEW
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In contrast to the number of T repeats, high numbers of TG repeats will result in a reduced amount of functional CFTR.16 The incidence of
R117H
on an IVS8-5T background was much higher in our cohort in comparison to a multicentre study of patients with the
R117H/
C mutation (39 with the
R117H
and 2 with the
R117C
mutation).
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66
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:66:41
status:
NEW
view ABCC7 p.Arg117His details
In this study of 41 patients, 16 had the
R117H
mutation on an IVS8-5T background, and 25 on an IVS8-7T background.17 TG repeats were not determined in this study.
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68
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:68:86
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:68:80
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:68:106
status:
NEW
view ABCC7 p.Arg117His details
In our study, the lack of any significant CF phenotype in patients compound for
R117H
/
G551D
compared with
R117H
/F508del mutations is intriguing.
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69
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:69:28
status:
NEW
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ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:69:34
status:
NEW
view ABCC7 p.Arg117His details
Compound heterozygosity for
G551D
/
R117H
mutations was associated with normal spirometry, BMI, no chronic infection and no symptoms.
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72
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:72:64
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:72:185
status:
NEW
view ABCC7 p.Gly551Asp details
Previous published data support this concept as homozygotes for
G551D
have an older age at diagnosis, reduced amount of exocrine PI and intestinal complications than those compound for
G551D
/F508del mutations.8 The correlation between genotype and phenotype is strongest for exocrine pancreatic function; however, this relationship is not consistent.
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73
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:73:56
status:
NEW
view ABCC7 p.Arg117His details
Only 52% of patients who are compound heterozygotes for
R117H
, where the second mutation was a severe mutation, were pancreatic sufficient.
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74
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:74:79
status:
NEW
view ABCC7 p.Arg117His details
In the Cystic Fibrosis Genotype-Phenotype Consortium, 87% of patients with the
R117H
/F508del mutation had pancreatic sufficiency2 ; however, the older age in our cohort may account for this difference (31.7 Æ 1.8 vs. 23.5 Æ 9.6 years).
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76
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:76:351
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:76:352
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:76:48
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:76:345
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:76:346
status:
NEW
view ABCC7 p.Arg117His details
In addition, the particularly high incidence of
R117H
on an IVS8-5T background in our centre, with its associated Table2PhenotypicvariablesforGroups1-4(genderratio,meanvalueÆSDandrangeforcontinuousvariables,percentagewithORforcategoricalvariables) Group1:F508del homozygote Group2:G551D+ severemutation Group3:R117H+ severemutation Group4:
R117H/G551D
Male/Female41/207/614/92/2 Age(years)27.6Æ6.9(17.7to48.2)26.3Æ4.5(20.1to35.5)31.7Æ13.3(19.8to76.6)35.3Æ3.2(31.3to39) Ageatdiagnosis(years)3.9Æ8.1(3to26)3.9Æ5.7(0.1to19)16.4Æ19.1(0to73.4)ÃÃ 13.8Æ16.7(0to29.3) PercentagepredictedFEV156.3%Æ22(19to110)77.5%Æ18.8(50to110)Ã 83.4%Æ21.2(27to116)ÃÃ 100%Æ2.4(97to102) YearlyrateofdeclineofFEV1(%/year)1.6Æ0.9(À0.5to4.0)0.9Æ0.7(À0.3to2.4)Ã 0.5Æ0.7(À0.7to1.8)Ã 0Æ0.1(0to0.1) BMI(kg/m2 )21.4Æ2.8(15.1to29.9)23.7Æ3.0(17.5to28.4)Ã 24.7Æ3.5(18.3to30.6)ÃÃ 26.6Æ1.1(25.2to28) InfectionwithP.aeruginosa75%62%(OR:0.5)26%(OR:0.1)ÃÃ 0% CultureofB.cepaciacomplex16%0%0%0% Useofazithromycin56%54%(OR:0.9)35%(OR:0.4)0% UseofrhDNase61%39%(OR:0.4)22%(OR:0.2)Ã 0% NumberofdaysofIVAb21.8Æ24.3(0to98)8.7Æ17.4(0to60)4.7Æ12.3(0to42)Ã 0(0) IGT/CFRD23%8%4%0% Useofinhaledantibiotic74%31%(OR:0.5)26%(OR:0.4)0% Pancreaticinsufficient97%69%(OR:0.07)Ã 48%(OR:0.03)ÃÃ 25%(OR:0.02)Ã Ã ComparedtoGroup1(P<0.05);ÃÃ ComparedtoGroup1(P<0.001);OR:OddsratiorelativetoGroup1.
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82
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:82:213
status:
NEW
view ABCC7 p.Gly551Asp details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 19734299:82:223
status:
NEW
view ABCC7 p.Arg117His details
Many of the patients in this study will have started taking pancreatic-enzyme supplementation immediately after diagnosis and so our data will be an overrepresentation of the overall amount of PI, particularly in
G551D
and
R117H
patients.
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84
ABCC7 p.Gly551Asp
X
ABCC7 p.Gly551Asp 19734299:84:344
status:
NEW
view ABCC7 p.Gly551Asp details
There is a high variability in phenotype within identical CFTR genotypes.11 However, as modifier genes remain to be identified, clinicians need to be mindful of consensus statements advising that genotype alone should not be used to predict clinical outcomes at the time of diagnosis.16 In conclusion, this study reports that patients with the
G551D
mutation and a second severe mutation have a milder clinical phenotype than F508del homozygous patients.
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