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PMID: 19627168
Rowe SM, Clancy JP
Pharmaceuticals targeting nonsense mutations in genetic diseases: progress in development.
BioDrugs. 2009;23(3):165-74. doi: 10.2165/00063030-200923030-00003.,
[PubMed]
Sentences
No.
Mutations
Sentence
Comment
477
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:477:51
status:
NEW
view ABCC7 p.Trp1282* details
As an example of this effect, mRNA levels from the
W1282X
CFTR allele were restored during aminoglycoside treatment, suggesting that the relationships between PTC readthrough and mRNA stabilization may exist in mammalian cells.
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484
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:484:114
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:484:239
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg553*
X
ABCC7 p.Arg553* 19627168:484:95
status:
NEW
view ABCC7 p.Arg553* details
ABCC7 p.Gly542*
X
ABCC7 p.Gly542* 19627168:484:88
status:
NEW
view ABCC7 p.Gly542* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 19627168:484:102
status:
NEW
view ABCC7 p.Arg1162* details
[26] They extended this work to the four most common disease-causing mutations in CFTR (
G542X
,
R553X
,
R1162X
, and
W1282X
), including studies in an immortalized lower airway cell line (IB3-1) isolated from a CF patient heterozygous for the
W1282X
CFTR mutation.
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518
ABCC7 p.Gly542*
X
ABCC7 p.Gly542* 19627168:518:193
status:
NEW
view ABCC7 p.Gly542* details
Suppression of PTCs in Animal Models Two mouse models have been developed that possess PTCs in disease-causing genes, including the mdx mouse (a model of muscular dystrophy) and the transgenic
G542X
-hCFTR mouse (a model of CF).
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522
ABCC7 p.Gly542*
X
ABCC7 p.Gly542* 19627168:522:29
status:
NEW
view ABCC7 p.Gly542* details
ABCC7 p.Gly542*
X
ABCC7 p.Gly542* 19627168:522:69
status:
NEW
view ABCC7 p.Gly542* details
Complementary studies in the
G542X
-hCFTR mouse (expressing the human
G542X
CFTR cDNA under regulatory control of the FABP promoter on a Cftr knockout background) confirmed that gentamicin treatment increased the detection of full-length CFTR protein in the gut (the site of CF-related mortality in this genetic model) and was associated with the appearance of cAMP-stimulated Cl-conductance in isolated gut tissue studied ex vivo.
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524
ABCC7 p.Gly542*
X
ABCC7 p.Gly542* 19627168:524:154
status:
NEW
view ABCC7 p.Gly542* details
Follow-up studies confirmed these effects and extended the findings to clinically relevant doses of both gentamicin and amikacin; amikacin suppressed the
G542X
-hCFTR premature stop mutation more effectively than gentamicin at clinically relevant doses.
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530
ABCC7 p.Gly542*
X
ABCC7 p.Gly542* 19627168:530:12
status:
NEW
view ABCC7 p.Gly542* details
[24] In the
G542X
-hCFTR mouse, oral and intraperitonealadministration led to detectable full-length CFTR localization at the apical cell membrane of gut glandular cells by immunofluorescent staining, and improved Cl-conductance as assayed by transepithelial ion transport.
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532
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:532:179
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 19627168:532:450
status:
NEW
view ABCC7 p.Arg1162* details
In the oral and parenteral experiments investigating PTC124 in the CF mouse model, correction of X X CFTR with PTC Unstable mRNA Stabilized mRNA Truncated CFTR (partial activity)
W1282X
Suppressor agents Genetic modifiers Transcription represents the PTC within the mRNA transcript NMD Baseline expression NMD modifiers Degraded mRNA Truncated CFTR (nonfunctional) Faithful translation Readthrough (+suppressors) + CFTR potentiator X
R1162X
Full-length CFTR Full-length (nonfunctional) OR S S S S S CFTR potentiator Full-length CFTR Full-length (nonfunctional) OR S S Suppressor agents 1 2 3 3 3 2 +/- +/- + + + + + + represents PTC Fig. 1.
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541
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:541:51
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 19627168:541:87
status:
NEW
view ABCC7 p.Arg1162* details
Again, this truncated CFTR may be functional (e.g.
W1282X
CFTR) or nonfunctional (e.g.
R1162X
CFTR).
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556
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:556:91
status:
NEW
view ABCC7 p.Trp1282* details
In both studies, the vast majority of patients with PTCs harbored at least one copy of the
W1282X
CFTR allele, a mutation highly prevalent in CF patients of Ashkenazi Jewish descent.
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559
ABCC7 p.Tyr122*
X
ABCC7 p.Tyr122* 19627168:559:203
status:
NEW
view ABCC7 p.Tyr122* details
Sermet-Gaudelus et al.,[52] recently reported correction of CFTR-dependent Cl-conductance, as measured by NPD, following 15 days of systemic treatment with gentamicin in six of nine CF patients with the
Y122X
mutation (eight of nine were homozygous).
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561
ABCC7 p.Tyr122*
X
ABCC7 p.Tyr122* 19627168:561:113
status:
NEW
view ABCC7 p.Tyr122* details
Notably, the sweat Cl-concentration improved from a mean of 109 mEq at baseline to 85mEq in CF patients with the
Y122X
mutation, following treatment with gentamicin (see further discussion of related studies below).
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567
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:567:123
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:567:217
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 19627168:567:38
status:
NEW
view ABCC7 p.Arg1162* details
In in vitro experiments comparing the
R1162X
(found immediately prior to the second nucleotide binding domain of CFTR) and
W1282X
CFTR (found within the second nucleotide binding domain) premature termination codons,
W1282X
CFTR was noted to be more susceptible to readthrough and exhibited partial activity in the truncated state.
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568
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:568:167
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 19627168:568:94
status:
NEW
view ABCC7 p.Arg1162* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 19627168:568:200
status:
NEW
view ABCC7 p.Arg1162* details
This was seen despite the presence of common UGA PTCs in both mutations and a +4 codon in the
R1162X
CFTR that would suggest relative susceptibility to readthrough [
W1282X
PTC is UGA-A, whereas the
R1162X
PTC is UGA-G]).
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569
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:569:205
status:
NEW
view ABCC7 p.Trp1282* details
[59] The results suggest that synthesis of both full-length protein (through PTC suppression) and truncated protein (through stabilization of mRNA) could contribute to CFTR rescue in CF patients harboring
W1282X
CFTR; alternatively, patients with this mutation might be more sensitive to readthrough.
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571
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:571:23
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Gly542*
X
ABCC7 p.Gly542* 19627168:571:31
status:
NEW
view ABCC7 p.Gly542* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 19627168:571:42
status:
NEW
view ABCC7 p.Arg1162* details
ABCC7 p.Tyr122*
X
ABCC7 p.Tyr122* 19627168:571:16
status:
NEW
view ABCC7 p.Tyr122* details
A rank order of
Y122X
,
W1282X
,
G542X
, and
R1162X
was seen among the most frequent stop mutations after gentamicin treatment, with relative suppression varying by as much as 7.2-fold, post-therapy.
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585
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 19627168:585:244
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Gly542*
X
ABCC7 p.Gly542* 19627168:585:73
status:
NEW
view ABCC7 p.Gly542* details
[60] The detection of rescued CFTR activity in several patients with the
G542X
CFTR mutation (and others) in the studies conducted in Israel[55] and France/ Belgium,[64] suggests that the treatment effect is not limited to individuals with the
W1282X
mutation and that the agent can potentially exhibit a broad spectrum of activity across multiple PTCs in vivo.
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