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PMID: 12820707
Hicks K, Beadling W, Shrimpton AE
Cystic fibrosis: S158N (605G --> A) is a rare genetic variant found in coupling with deltaF508.
Genet Test. 2003 Spring;7(1):73-6.,
[PubMed]
Sentences
No.
Mutations
Sentence
Comment
1
ABCC7 p.Ser158Asn
X
ABCC7 p.Ser158Asn 12820707:1:17
status:
NEW
view ABCC7 p.Ser158Asn details
Cystic Fibrosis:
S158N
(605G R A) Is a Rare Genetic Variant Found in Coupling with DF508 KAREN HICKS, WENDY BEADLING, and ANTONY E. SHRIMPTON ABSTRACT A single nucleotide change at codon 158 in exon 4 of the CFTR gene ABCC7 was detected in an asymptomatic individual who carried DF508 and had a family history of cystic fibrosis (CF).
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2
ABCC7 p.Ser158Asn
X
ABCC7 p.Ser158Asn 12820707:2:44
status:
NEW
view ABCC7 p.Ser158Asn details
Further study, using linkage, revealed that
S158N
was coupled with DF508, both having been inherited from the same parent.
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16
ABCC7 p.Tyr122*
X
ABCC7 p.Tyr122* 12820707:16:61
status:
NEW
view ABCC7 p.Tyr122* details
Novel fragments with sizes not compatible with 621 1 1G R T,
Y122X
, or any other previously described CF mutation in this exon (www.genet.sickkids.
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22
ABCC7 p.Ser158Asn
X
ABCC7 p.Ser158Asn 12820707:22:198
status:
NEW
view ABCC7 p.Ser158Asn details
This transition of a G to A occurs at nucleotide 605; the second nucleotide of codon 158, is predicted to result in the substitution of an asparagine (AAT) for a serine (AGT), hence the designation
S158N
.
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23
ABCC7 p.Ser158Asn
X
ABCC7 p.Ser158Asn 12820707:23:89
status:
NEW
view ABCC7 p.Ser158Asn details
Follow-up testing on the patient`s parents and affected sibling surprisingly showed that
S158N
and DF508 were in coupling, having been inherited from the same parent (Fig. 4).
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27
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 12820707:27:131
status:
NEW
view ABCC7 p.Arg117His details
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 12820707:27:193
status:
NEW
view ABCC7 p.Arg117His details
This was especially true because, although the patient was asymptomatic, mutations in exon 4 can be associated with mild CF (e.g.,
R117H
in cis with IVS8-5T) or can even be asymptomatic (e.g.,
R117H
in cis with IVS8-7T or 9T) when seen as a compound heterozygote with DF508 (Kieswetter et al., 1993).
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29
ABCC7 p.Ser158Asn
X
ABCC7 p.Ser158Asn 12820707:29:49
status:
NEW
view ABCC7 p.Ser158Asn details
To our surprise, we found that the new mutation,
S158N
, was coupled with DF508.
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31
ABCC7 p.Ser158Asn
X
ABCC7 p.Ser158Asn 12820707:31:18
status:
NEW
view ABCC7 p.Ser158Asn details
Thus, we describe
S158N
as a rare genetic variant.
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40
ABCC7 p.Ser158Asn
X
ABCC7 p.Ser158Asn 12820707:40:33
status:
NEW
view ABCC7 p.Ser158Asn details
Serine to asparagineat codon158:
S158N
(605G R A).
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42
ABCC7 p.Ser158Asn
X
ABCC7 p.Ser158Asn 12820707:42:4
status:
NEW
view ABCC7 p.Ser158Asn details
CF:
S158N
(605G R A).
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47
ABCC7 p.Arg117His
X
ABCC7 p.Arg117His 12820707:47:15
status:
NEW
view ABCC7 p.Arg117His details
The example of
R117H
and IVS8-polyT has already been discussed.
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48
ABCC7 p.Ser158Asn
X
ABCC7 p.Ser158Asn 12820707:48:55
status:
NEW
view ABCC7 p.Ser158Asn details
Additional studies will be needed to determine whether
S158N
is such a modifying mutation, a primary pathologic mutation, or a benign variant.
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49
ABCC7 p.Ser158Asn
X
ABCC7 p.Ser158Asn 12820707:49:7
status:
NEW
view ABCC7 p.Ser158Asn details
If the
S158N
/DF508 genotype had first been detected in the CF-affected child, rather than as in this case, in an unaffected sibling, how often would a family study to determine linkage have been initiated?
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