ABCMdb

ABCC7 p.His199Cys

ClinVar:	c.596A>G , p.His199Arg ? , not provided c.595C>T , p.His199Tyr D , Pathogenic c.597T>G , p.His199Gln ? , not provided
CF databases:	c.595C>T , p.His199Tyr D , CF-causing ; CFTR1: The mutation was found in a German CF patient who is heterozygous for [delta]F508 and negative for more than 120 other known mutations. The patient was diagnosed by the age of four years because of recurrent pneumonias, but exhibits only mild pancreatic symptoms and borderline swet chloride values. So far, H199Y was not found in a further 28 German and 8 Turkish non-[delta]F508 CF chromosomes. c.596A>G , p.His199Arg (CFTR1) ? , c.597T>G , p.His199Gln (CFTR1) ? , This alteration does not affect a restriciton site so we are testing an ASO.
Predicted by SNAP2:	A: D (95%), C: D (95%), D: D (95%), E: D (95%), F: D (95%), G: D (95%), I: D (95%), K: D (95%), L: D (95%), M: D (95%), N: D (91%), P: D (95%), Q: D (63%), R: D (95%), S: D (95%), T: D (95%), V: D (95%), W: D (95%), Y: D (59%),
Predicted by PROVEAN:	A: D, C: D, D: D, E: D, F: D, G: D, I: D, K: D, L: D, M: D, N: D, P: D, Q: D, R: D, S: D, T: D, V: D, W: D, Y: D,

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Publications
[hide] Channel-lining residues in the M3 membrane-spannin... Biochemistry. 1998 Sep 1;37(35):12233-40. Akabas MH
Channel-lining residues in the M3 membrane-spanning segment of the cystic fibrosis transmembrane conductance regulator.
Biochemistry. 1998 Sep 1;37(35):12233-40., 1998-09-01 [PMID:9724537]

Abstract [show]
The cystic fibrosis transmembrane conductance regulator (CFTR) forms a chloride-selective channel. Residues from the 12 putative membrane-spanning segments form at least part of the channel lining. We need to identify the channel-lining residues in order to understand the structural basis for the channel's functional properties. Using the substituted-cysteine-accessibility method we mutated to cysteine, one at a time, 24 consecutive residues (Asp192-Ile215) in the M3 membrane-spanning segment. Cysteines substituted for His199, Phe200, Trp202, Ile203, Pro205, Gln207, Leu211, and Leu214 reacted with charged, sulfhydryl-specific reagents that are derivatives of methanethiosulfonate (MTS). We infer that these residues are on the water-accessible surface of the protein and probably form a portion of the channel lining. When plotted on an alpha-helical wheel the exposed residues from Gln207 to Leu214 lie within an arc of 60 degrees; the exposed residues in the cytoplasmic half (His199-Ile203) lie within an arc of 160 degrees. We infer that the secondary structures of the extracellular and cytoplasmic halves of M3 are alpha-helical and that Pro205, in the middle of the M3 segment, may bend the M3 segment, moving the cytoplasmic end of the segment in toward the central axis of the channel. The bend in the M3 segment may help to narrow the channel lumen near the cytoplasmic end. In addition, unlike full-length CFTR, the current induced by the deletion construct, Delta259, is inhibited by the MTS reagents, implying that the channel structure of Delta259 is different than the channel structure of wild-type CFTR.

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Sentences [show]
No. Sentence Comment
113 In contrast, a 1-min application of 10 mM MTSES- significantly inhibited the CFTR-induced currents for the mutants H199C, F200C, W202C, I203C, P205C, Q207C, and L211C (Figure 4). Login to comment
167 Thus, in order for the MTS reagents to reach the most cytoplasmic accessible residue in the M3 segment, H199C, the channel must be at least 6 Å in diameter from the extracellular end to the level of His199. Login to comment