ABCB4 p.Ser320Phe

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PMID: 17726488 [PubMed] Degiorgio D et al: "Molecular characterization and structural implications of 25 new ABCB4 mutations in progressive familial intrahepatic cholestasis type 3 (PFIC3)."
No. Sentence Comment
18 The two TMDs contain specific sites for substrate binding and translocation, whereas the two NBDs, which display a high degree of sequence similarity with the equivalent domain of ABC transporters, couple the energy obtained from ATP hydrolysis to substrate transport.8 The ICDs are deemed to be involved in mediating the coupling between NBD conformational changes and the reorientation of TM helices concomitant with substrate extrusion.9 The ABCB1 gene, one of the most extensively studied ABC transporters, is responsible for the human multidrug resistance phenotype that is a rapidly growing obstacle to the treatment of numerous infectious diseases, including human immunodeficiency10 and malaria.11 The properties of this transporter are also exploited in cancer pharmacological therapy where ABCB1 translocates the chemotherapeutic drugs and other molecules with a broad but defined specificity.12 A gene duplication of ABCB1 and additional mutations selected as advantageous have created in mammals the T715I G723E L724AfsX744 A737V G954S G762X T775M G126E S320F A840D OUT IN Linker region F357L L701P A364V NBD-NH2 terminal NBD-COOH terminal A1193T NH2 COOH 1 2 54 6 7 8 129 11 10 EC2EC1 ICD2 A250P Y279X A286V ICD1 R159X T175A ICD3 EC3 EC4 EC6EC5 ICD4 ICD6 ICD5 E888X Y403H V475A A511T E558K R590Q T593A M630V 3 S379KfsX413 P726T Figure 1 (a) Localization of the 29 mutations identified in this study in the ABCB4 protein, schematically represented in its domains.
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ABCB4 p.Ser320Phe 17726488:18:1066
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77 Notably, two mutations already described were found in members of different families that are not part of a genetic isolate: p.T175A and p.S320F were identified in unrelated Caucasian patients (three and two cases, respectively).
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ABCB4 p.Ser320Phe 17726488:77:139
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84 There are no PFIC3 epidemiologic data available to date; however, knowing that the number of newborns in Italy has been on average 500 000/year in the last 14 years (http://demo.istat.it/), since we observed 18 patients with ABCB4-mutated alleles born within a 14-year period (with Table 2 Mutations identified in ABCB4 Type of mutationb Exons cDNA locusa Missense Frameshift or nonsense ABCB4-predicted domain GenBank accession numberc Exon 6 c.377G4A G126E TM2 DQ861346 Exon 6 c.523A4G T175A ICD1 Exon 6 c.475C4T R159X ICD1 DQ861347 Exon 8 c.748G4C A250P ICD2 DQ861349 Exon 9 c.837T4A Y279X ICD2 DQ861348 Exon 9 c.857C4T A286V ICD2 DQ861350 Exon 9 c.959C4T S320F TM5 Exon 10 c.1069T4C F357L ICD3 DQ861351 Exon 10 c.1091C4T A364V ICD3 DQ861352 Exon 11 c.1135_1136insAA S379KfsX413 ICD3 DQ861353 Exon 11 c.1207T4C Y403H NBD-NH2 A-loop EF035007 Exon 13 c.1424T4C V475A NBD-NH2 ter DQ861354 Exon 13 c.1531G4A A511T NBD-NH2 ter DQ861355 Exon 14 c.1672G4A E558K NBD-NH2 ter DQ861356 Exon 15 c.1769G4A R590Q NBD-NH2 ter Exon 15 c.1777A4G T593A NBD-NH2 ter DQ861357 Exon 15 c.1888A4G M630V NBD-NH2 ter DQ861358 Exon 17 c.2102T4C L701P Linker region DQ861359 Exon 17 c.2144C4T T715I TM7 DQ861360 Exon 17 c.2168G4A G723E TM7 DQ861361 Exon 17 c.2169_2170insG L724AfsX744 TM7 DQ861362 Exon 17 c.2176C4A P726T TM7 DQ861363 Exon 17 c.2210C4T A737V EC4 DQ861364 Exon 18 c.2284G4T G762X TM8 DQ861365 Exon 19 c.2324C4T T775M TM8 Exon 21 c.2519C4A A840D TM9 DQ861366 Exon 21 c.2662G4T E888X ICD5 DQ861367 Exon 23 c.2860G4A G954S TM11 DQ861368 Exon 27 c.3577G4A A1193T NBD-COOH ter DQ861369 a cDNA sequence is based on reference sequence GenBank NM_018849.
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ABCB4 p.Ser320Phe 17726488:84:659
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PMID: 15077010 [PubMed] Pauli-Magnus C et al: "Sequence analysis of bile salt export pump (ABCB11) and multidrug resistance p-glycoprotein 3 (ABCB4, MDR3) in patients with intrahepatic cholestasis of pregnancy."
No. Sentence Comment
8 Three nonsynonymous sites in codons for evolutionarily conserved amino acids were specific for the ICP collective (BSEP, N591S; MDR3, S320F and G762E).
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ABCB4 p.Ser320Phe 15077010:8:135
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136 1 , 1 Splicing 2 , 1 N591S 3 NA 4 3.7 Splicing 5 NA 6 9.0 7 , 1 8 , 1 9 , 1 10 1.7 G762E 11 , 1 12 2.6 13 2.8 14 4.5 15 2.9 Splicing 16 , 1 17 4.2 18 2.5 Splicing 19 2.3 20 1.4 S320F 21 , 1 ICP-specific variants are indicated with their respective variant number (Tables 1 and 2).
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ABCB4 p.Ser320Phe 15077010:136:177
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109 Non-synonymous changes newly observed as singletons or doubletons in our sample set coded for the following amino acid changes: S320F, E528D, G762E and T775M.
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ABCB4 p.Ser320Phe 15077010:109:128
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116 The ICP-specific variants included two non-synonymous sites (heterozygous : exon 18, G762E; homozygous : exon 19, S320F) and one synonymous site (exon 6, T459C).
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ABCB4 p.Ser320Phe 15077010:116:114
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142 Q R I K R I Q I D F H G I E H D T T E L H S I D D T L K I S E G I G D K R Q R K F F H A I L R G A V A G V T R I G G Q H L E K A Q K H L L G A E I F E YA R R T L I E G L S H A F K A H R D F H S H D Q D K H S T G A L A Q V Q G A T G T R L R S R H G A L L K R E I A E T A T S L T Q E R V Y H S E F L P Y R H S V Q K K I K D E L E A A G H E L A K A Y D A T Q G K K V Q E P I L I E A I S C Q Q R I A I E V V Q G L S L P A K L S H KL H A D T A L R T A K K A I H V V K E Y G K K F D A R V K Q Q R I L A P V F Q G G A V Q H T G H E Q H L K A A S C S S G V L L A Q L G I R H D G Y A G Q L S G G P R A H V P F G R S TT A D L L L I E I H A D L I Q I K Q A L L G V V H S F Y S L Q R E F L Q V T S K G K L H V Q H I D Q S V V E R V G D K H V V F H Y P V K E TE E D L A S T T I H R L S T A E S Y S D I D F K E L L L D G Q E A A K A A A V E L P K K Y F G H I T F E Y L A TE E V V K E S Q E R T C I V G D A L K R A H H I P I F A P L G V T K G L P K D Y F H D L E R H A T G H K P T S E L G I S S K F D G V T K T K K R K H I F R Y S D H Q L T L D K A A Q K A E G V F V D K G A T H F S S L S F H V H L L P K K H T R E E E F P I H A Y Y Y Y H T D S R G H K A I I E S K Q Q K C H I F VG P G D D A F R F C G H R F R D V G A HY L I V H G Y G H Q V F G I GE L H H P S G L G I A H A T T H G H S LFL G A G L A Y I A T L V L S P I I I G HT T V F H S I L F G A F I V G Q S A P C A F S LI L F L F I I S G F T F F L Q G F T F G F A T F V G H F V Y G S H L A F A A S Y Y L L I F I FV A F S P G L Q G I A H A T V C G A H L I A L I L S I S F H I Y A T L L L V F I A IS F G A V A LV H AG S S F G I T Q A F H Y F S Y A L L L V V A I I P V S A I V G A Q H G T G I I I S F I F V V YG I A H F Q Q F A G F I V G F I A K A Y E K D L S F A S L A E A R E A H E K G I K I K A ISAH I E E T D L D H R V T E H K K E S V K F Y V G D K A A T V A H R L S A L L EI K H P A H G H Q K S L D C L A Q V E A D F G A I V V Q G S H S S T Q H H S E F E L H R G R T T I A E E G EE H F L R S K R K L K H S Q H S T QQ QG ID A IVK K G G S L L E A T S Q D R I A I R Q P K I L L A H A V L A V E R G A G P K F D T L Q L E V A K K R I E Y A H A F H H T K D E V H C Y G R G I E E S V V G Q T S F L V P T I H L R E I Y D R H F H V I Q P Y L R Q D I I T G E D H D S T V Q L T G S G C G K S V K H L G K L V Q G S Q V T A R H V K I A V F S Y P S H D P H G E K L G K I S D H E KAGLHF QIIILS F S D I K P H H D I I D V P P V H A E L G D T E V F V I I A A G R A H A F A D P K V L K F H K T E H L R R S L Q T G A Q H IAL V I T S H A I G L L A A S H A V L V V V S Q H T F A A L S K E Y I K T175A E528D T775M R652G S Cytoplasm R T G762E S320F Extracellular K Fig. 2 Secondary structure of multidrug resistance protein 3 with non-synonymous coding region genetic variants.
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ABCB4 p.Ser320Phe 15077010:142:2559
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176 Out of the coding region changes, two were newly identified non-synonymous mutations located in highly conserved regions of the protein (S320F and G762E).
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ABCB4 p.Ser320Phe 15077010:176:137
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PMID: 19260995 [PubMed] Hsu YC et al: "Adult progressive intrahepatic cholestasis associated with genetic variations in ATP8B1 and ABCB11."
No. Sentence Comment
86 In contrast, homozygous V444A of ABCB11 was originally considered as a frequent polymorphism in the western population, which might be associated with intrahepatic cholestasis of pregnancy.15 Keitel et al. investigated an unusual case of severe intrahepatic cholestasis of pregnancy and demonstrated that a homozygous V444A in combination with a homozygous MDR3 mutation (S320F) was associated with diminished canalicular BSEP.16 Kubitz et al. reported compound heterozygosity of V444A and E186G in a BRIC-2 patient with decreased canalicular BSEP.12 Lang et al. described a significant association of V444A with drug-related cholestasis and concluded that V444A was susceptible for cholestasis under certain challenges, based on their in vitro study of BSEP expression and its transporter activity.17 It is possible that the multi-genetic alterations in this patient contributed to an inherited susceptibility for secondary insults, which caused the phenotype with disease onset at a later age than usual genetic diseases.
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ABCB4 p.Ser320Phe 19260995:86:372
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PMID: 19490418 [PubMed] Zimmer V et al: "Combined functional variants of hepatobiliary transporters and FXR aggravate intrahepatic cholestasis of pregnancy."
No. Sentence Comment
32 Genetic analysis Sequencing of all exons and exon-intron boundaries of the ABCB4 and ABCB11 genes was performed, revealing the rare ABCB4 mutation c.959C 4 T (p.S320F) and the common ABCB11 variant c.1331T 4C (p.V444A).
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ABCB4 p.Ser320Phe 19490418:32:161
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PMID: 19840255 [PubMed] Poupon R et al: "Combined features of low phospholipid-associated cholelithiasis and progressive familial intrahepatic cholestasis 3."
No. Sentence Comment
7 One of them (c.959C 4 T; p.Ser320Phe) was previously implicated in LPAC and the second one (c.2858C 4 A; p.Ala953Asp) in PFIC3.
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ABCB4 p.Ser320Phe 19840255:7:27
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89 Sequence ABCB4 gene analysis showed the presence of composite heterozygous double alterations affecting exon 9 (c.959C 4 T; p.Ser320Phe) and exon 23 (c.2858C4 A; p.Ala953Asp) in both siblings (Fig. 1, arrows).
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ABCB4 p.Ser320Phe 19840255:89:126
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110 One was located in exon 9, and resulted in a substitution of serine for phenylalanine (p.Ser320Phe).
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ABCB4 p.Ser320Phe 19840255:110:89
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135 (Ala953Asp), previously reported in a homozygous state in PFIC3 (3) and one heterozygous missense mutation (Ser320Phe) previously reported in LPAC (5).
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ABCB4 p.Ser320Phe 19840255:135:108
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136 The Ser320Phe has never been described in PFIC3 (1-3) and the Ala953Asp has never been found in LPAC [(4, 5) and unpublished personal data].
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ABCB4 p.Ser320Phe 19840255:136:4
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PMID: 20422497 [PubMed] Pauli-Magnus C et al: "Genetic determinants of drug-induced cholestasis and intrahepatic cholestasis of pregnancy."
No. Sentence Comment
82 In line with this, a recent report of an ICP patient suffering from alterations in three genes: p.S320F in ABCB4 (previously described in a patient with ICP113 ), p.A444V in ABCB11, and c.-1G> T in FXR,114 again highlights the role of FXR as a factor associated with ICP.
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ABCB4 p.Ser320Phe 20422497:82:98
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PMID: 22331132 [PubMed] Wendum D et al: "Aspects of liver pathology in adult patients with MDR3/ABCB4 gene mutations."
No. Sentence Comment
107 Location and nucleotide change Effect on protein Status of variant Mutation category 1 c.1328dup p.Arg444Glu fsX4, truncating Heterozygous Insertion 2 c.1584 G > C p.Glu528Asp Heterozygous Missense 3 c.101 C > T p.Thr34Met Heterozygous Missense 4 c.1553delT p.Leu518Tyr fsX16, truncating Heterozygous Deletion 5 c.139 C > G p.Arg 47 Gly Heterozygous Missense 6 c.1217 G > A p.Arg 406 Gln Heterozygous Missense c.140 G > A p.Arg47Gln Heterozygous, compound Missense 7 c.857 C > T p.Ala 286 Val Heterozygous Missense 8 c.2324 C > T p.Thr775Met Heterozygous Missense c.2836 G > A p.Ala946Thr Heterozygous Missense 9 c.523A > G p.Thr175Ala Heterozygous Missense 10 c.1005 + 5 G > A p.?
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ABCB4 p.Ser320Phe 22331132:107:85
status: NEW
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ABCB4 p.Ser320Phe 22331132:107:134
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108 Heterozygous Splicing 11 c.523A > G p.Thr175Ala Heterozygous Missense 12 c.959 C > T Ser 320 Phe Heterozygous Missense 13 c.959 C > T Ser 320 Phe Heterozygous Missense Fig. 1 Liver lesions in adult patients with MDR3 deficiency (MDR3/ABCB4 mutation).
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ABCB4 p.Ser320Phe 22331132:108:85
status: NEW
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ABCB4 p.Ser320Phe 22331132:108:134
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PMID: 21119540 [PubMed] Colombo C et al: "Clinical features and genotype-phenotype correlations in children with progressive familial intrahepatic cholestasis type 3 related to ABCB4 mutations."
No. Sentence Comment
107 Nucleotidechange (effectonprotein) Predictionscoresby PolyPhenanalysis Nucleotidechange (effectonprotein) Predictionscoresby PolyPhenanalysis Referencefor eachgenotype 1[1-I]c.475C>T(p.R159X)XUnknownUnknown20 1[1-II]c.475C>T(p.R159X)XUnknownUnknownThisstudy 2[2-I]c.523A>G(p.T175A)0.774c.1069T>C(p.F357L)þc.2324C>T(p.T775M)1.079þ0.59720 3[3-I]c.1135_1136insAA(p.S379KfsX413)Xc.2102T>C(p.L701P)2.22620 4[4-I]c.2662G>T(p.E888X)Xc.748G>C(p.A250P)Rc.1888A>G(p.M630V)1.871R1.67720 5[5-I]c.959C>T(p.S320F)1.287c.857C>T(p.A286V)1.40820 6[6-I]c.377G>A(p.G126E)1.998c.1531G>A(p.A511T)2.1720 6[6-II]c.377G>A(p.G126E)1.998c.1531G>A(p.A511T)2.1720 7[7-I]c.2176C>A(p.P726T)2.086c.1769G>A(p.R590Q)þc.2284G>T(p.G762X)2.623RX20 8[8-1]c.1091C>T(p.A364V)1.343c.2210C>T(p.A737V)0.21720 9[9-I]c.1777A>G(p.T593A)2.044UnknownUnknown20 10[10-I]c.2144C>T(p.T715I)0.383UnknownUnknown20 11[11-I]c.2519C>A(p.A840D)1.803c.1424T>C(p.V475A)2.60320 12[12-I]c.1672G>A(p.E558K)2.486c.2168G>A(p.G723E)Rc.3577G>A(p.A1193T)1.548þ2.34120 12[12-II]c.1672G>A(p.E558K)2.486c.2168G>A(p.G723E)Rc.3577G>A(p.A1193T)1.548þ2.34120 13[13-I]c.2860G>A(p.G954S)0.245c.2860G>A(p.G954S)0.24520 14[14-I]c.523A>G(p.T175A)0.774UnknownUnknown20 15[15-I]c.959C>T(p.S320F)1.287c.837T>A(p.Y279X)X20 16[16-I]c.523A>G(p.T175A)0.774UnknownUnknown20 17[17-I]c.2169_2170insG(p.L724AfsX744)Xc.2169_2170insG(p.L724AfsX744)X20 17[17-II]c.2169_2170insG(p.L724AfsX744)Xc.2169_2170insG(p.L724AfsX744)X20 18[18-I]c.1207T>C(p.Y403H)2.798c.1207T>C(p.Y403H)2.79820 19[19-I]c.208G>C(p.G70R)þc.1769G>A(p.R590Q)1.497þ2.623c.959C>T(p.S320F)1.287Thisstudy 19[19-II]c.208G>C(p.G70R)þc.1769G>A(p.R590Q)1.497þ2.623c.959C>T(p.S320F)1.287Thisstudy 19[19-III]c.208G>C(p.G70R)þc.1769G>A(p.R590Q)1.497þ2.623c.959C>T(p.S320F)1.287Thisstudy 20[20-I]c.217C>G(p.L73V)0.489UnknownUnknown22,thisstudy 21[21-I]c.959C>T(p.S320F)1.287c.959C>T(p.S320F)1.28716,thisstudy 22[22-I]c.1207T>C(p.Y403H)2.798UnknownUnknownThisstudy Xidentifiesmutationsthatpredictprematureterminationoftranslation.PolyPhenpredictionwithPSICscoredifferencesbelow1.5definebenignsubstitutions;PSICscoredifferencesencompassing between1.5and2.0(bold)definesubstitutionspossiblydamaging,whereasabove2.0(underlined)definesubstitutionsprobablydamaging.
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ABCB4 p.Ser320Phe 21119540:107:503
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ABCB4 p.Ser320Phe 21119540:107:1233
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ABCB4 p.Ser320Phe 21119540:107:1591
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ABCB4 p.Ser320Phe 21119540:107:1688
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ABCB4 p.Ser320Phe 21119540:107:1786
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ABCB4 p.Ser320Phe 21119540:107:1882
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ABCB4 p.Ser320Phe 21119540:107:1904
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108 substitution p.S320F in 3 cases.
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ABCB4 p.Ser320Phe 21119540:108:15
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PMID: 19584064 [PubMed] Bacq Y et al: "ABCB4 gene mutations and single-nucleotide polymorphisms in women with intrahepatic cholestasis of pregnancy."
No. Sentence Comment
5 One nonsense mutation (p.Arg144Stop) and two missense mutations (p.Ser320Phe and p.Thr775Met) were revealed each in one heterozygous patient. A third missense mutation (p.Arg590Gln) was detected in three heterozygous patients and in two homozygous patients also homozygous for a particular haplotype of three single-nucleotide polymorphisms (c.175C.T, c.504T.C, c.711A.T).
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ABCB4 p.Ser320Phe 19584064:5:67
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48 A nonsense mutation (nucleotide position from ATG, c.462C.T; amino acid position, p.Arg144Stop) was detected in exon 6 in one heterozygous patient.14 A missense mutation (c.959C.T, p.Ser320Phe) was detected in exon 9 in one heterozygous patient. A missense mutation (c.1769G.A, p.Arg590Gln) was detected in exon 15 in two homozygous and three heterozygous patients with ICP and in one heterozygous control.
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ABCB4 p.Ser320Phe 19584064:48:183
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66 The heterozygous nonsense mutation (p.Arg144Stop) detected in one patient has previously been reported by our group.14 Three missense mutations (p.Ser320Phe, p.Arg590Gln, p.Thr775Met) were detected in this study.
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ABCB4 p.Ser320Phe 19584064:66:147
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68 The p.Ser320Phe mutation has been described in homozygous patients with ICP16 21 and was absent in our control group.
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ABCB4 p.Ser320Phe 19584064:68:6
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74 Furthermore, Arg590 is well conserved during evolution (fig 1), and the missense mutation p.Arg590Gln is localised in the first ATP-binding domain of the ABCB4 protein, where it substitutes a basic amino acid for a Table 3 Allele frequencies of ABCB4 genomic variants in 50 patients with intrahepatic cholestasis of pregnancy (100 chromosomes) and 107 controls (214 chromosomes) Genomic variant Exon Allele identification ICP (n (%)) Controls (n (%)) p Value Deduced effect Protein domain c.175 C.T 4 C 86 (86) 180 (84.1) 0.66 Silent T 14 (14) 34 (15.9) c.462 C.T 6 C 99 (99) 214 (100) 0.14 p.Arg144Stop (nonsense) Intracytoplasmic first loopT 1 (1) 0 (0) c.504 T.C 6 T 68 (68) 115 (53.7) 0.017 Silent C 32 (32) 99 (46.3) c.711 A.T 8 A 86 (86) 176 (82.2) 0.40 Silent T 14 (14) 38 (17.8) c.959 C.T 9 C 99 (99) 214 (100) 0.14 p.Ser320Phe (missense) TM5 T 1 (1) 0 (0) c.1769 G.A 15 G 93 (93) 213 (99.5) 0.0017 p.Arg590Gln (missense) NBD1 A 7 (7) 1 (0.5) c.1954 A.G 16 A 97 (97) 202 (94.4) 0.40 p.Arg652Gly (missense) NBD1 G 3 (3) 12 (5.6) c.2324 C.T 19 C 99 (99) 214 (100) 0.32 p.Thr775Met (missense) TM8 T 1 (1) 0 (0) ICP, intrahepatic cholestasis of pregnancy; NBD, nucleotide-binding domain; TM, transmembrane domain; n, number of chromosomes.
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ABCB4 p.Ser320Phe 19584064:74:826
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94 Indeed, 82% of Table 4 Characteristics of eight patients with intrahepatic cholestasis of pregnancy (ICP) exhibiting ABCB4 mutations Nature of mutation (exon) Age Onset of pruritus (weeks of gestation) Total bilirubin* (N = 17 mmol/l) ALT* (N = 35 U/l) Total bile acids* (N = 6 mmol/l) GGT* (N = 15 U/l) Biliary lithiasis p.Arg144Stop:R/X (6) 23 26 36 1280 120.9 63 No p.Ser320Phe:S/F (9) 37 30 22 437 128.7 16 No p.Arg590Gln:R/Q (15) 39 30 8 73 17.7 13 No p.Arg590Gln:R/Q (15) 28 34 21 134 17.7 119 No p.Arg590Gln:Q/Q (15) 33 35 33 137 26.0 37 No p.Arg590Gln:Q/Q (15) 37 30 15 204 6.1 19 No p.Arg590Gln:R/Q (15) 24 30 14 173 78.0 20 No p.Thr775Met:T/M (19) 35 36 17 144 36.2 26 No *Maximum values during one occurrence of ICP.
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ABCB4 p.Ser320Phe 19584064:94:371
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PMID: 18083082 [PubMed] Floreani A et al: "Hepatobiliary phospholipid transporter ABCB4, MDR3 gene variants in a large cohort of Italian women with intrahepatic cholestasis of pregnancy."
No. Sentence Comment
90 In a recent reported case of severe ICP in a woman of Moroccan descent [21], gene sequencing revealed a homozygous MDR3 mutation (S320F).
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ABCB4 p.Ser320Phe 18083082:90:130
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91 The patient was also homozygous for the common BSEP polymorphism V444A.
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ABCB4 p.Ser320Phe 18083082:91:130
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PMID: 17562004 [PubMed] Rosmorduc O et al: "Low phospholipid associated cholelithiasis: association with mutation in the MDR3/ABCB4 gene."
No. Sentence Comment
55 The mutation S320F has also been recently identified in a patient with intrahepatic cholestasis of pregnancy and cholelithiasis [7,11].
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ABCB4 p.Ser320Phe 17562004:55:13
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64 In addition, LPAC syndrome was observed in patients exhibiting the same or similar nonsense or missense mutations: in a mother and her elder son with an identical heterozygous nonsense mutation (1327insA); in independent patients from non-consanguineous families with the same homozygous missense mutation (Ser320Phe or Ala934Thr), while their heterozygous parents were asymptomatic; in patients with a similar nonsense mutation (1006-1016insT and 1006-1016delT) and in unrelated patients with the same missense mutations (Pro1161Ser).
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ABCB4 p.Ser320Phe 17562004:64:307
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PMID: 16622704 [PubMed] Oude Elferink RP et al: "Function and pathophysiological importance of ABCB4 (MDR3 P-glycoprotein)."
No. Sentence Comment
141 Canalicular lipid transport defects can cause gallstone formation Cholesterol supersaturation of bile, which occurs in a large proportion of humans, leads to the formation of cholesterol Walker B; L556R 571del Truncation PFIC3 LPAC ICP 27 splice Truncation 132 del Truncation TM 2; W138R TM 12; 981 del Truncation Linker; Q636X Truncation TM 11; R957X Truncation TM 6; S346I E395G Walker B; I541F TM 12; G983S Walker A; V425M Walker A; T424A Walker B; D564G TM 7; F711S 180 del truncation 336 delT truncation Exon 22-23 del truncation F165I T175A TM 5; M301T TM 5; S320F 336 insT truncation Walker A; 432 insA truncation E528D L591Q W658stop 757 insT R788E A934T P1161S TM 5; S320F TM 8; G762ER144X Walker B; A546D Walker B; G535AALL 96 del Truncation Walker B; L556R 571del Truncation PFIC3 LPAC ICP 27 splice Truncation 132 del Truncation TM 2; W138R TM 12; 981 del Truncation Linker; Q636X Truncation TM 11; R957X Truncation TM 6; S346I E395G Walker B; I541F TM 12; G983S Walker A; V425M Walker A; T424A Walker B; D564G TM 7; F711S 180 del truncation 336 delT truncation Exon 22-23 del truncation F165I T175A TM 5; M301T TM 5; S320F 336 insT truncation Walker A; 432 insA truncation E528D L591Q W658stop 757 insT R788E A934T P1161S TM 5; S320F TM 8; G762ER144X Walker B; A546D Walker B; G535AALL 96 del Truncation Fig. 3 Summary of the known mutations and their localization in the protein, as identified in patients with PFIC type 3, LPAC syndrome (intrahepatic gallstone formation), and intrahepatic cholestasis of pregnancy (ICP).
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ABCB4 p.Ser320Phe 16622704:141:565
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ABCB4 p.Ser320Phe 16622704:141:676
status: NEW
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ABCB4 p.Ser320Phe 16622704:141:1130
status: NEW
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ABCB4 p.Ser320Phe 16622704:141:1241
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PMID: 16890614 [PubMed] Keitel V et al: "Combined mutations of canalicular transporter proteins cause severe intrahepatic cholestasis of pregnancy."
No. Sentence Comment
5 Gene sequencing revealed a homozygous MDR3 gene mutation (S320F).
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ABCB4 p.Ser320Phe 16890614:5:58
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32 A single nucleotide exchange from cytidine to thymidine at position 959 in exon 9 of MDR3 (959C¡T) led to a change from serine to phenylalanine (S320F) (Figure 2A), which has been described to be ICP specific.6 The second homozygous polymorphism was detected in the BSEP gene at the complementary DNA position 1331 with a thymidine replaced by a cytidine (1331T¡C), leading to an exchange of valine to alanine (V444A) (Figure 2B).
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ABCB4 p.Ser320Phe 16890614:32:150
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35 The patient`s mother and aunt (the mother`s sister) were heterozygous for the MDR3 mutation S320F.
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ABCB4 p.Ser320Phe 16890614:35:92
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58 Two ICP-specific nonsynonymous SNPs were detected in the MDR3 gene (S320F and G762E).6 In the BSEP gene, one ICP-specific SNP was found (N591S).6 Another nucleotide exchange from T to C at position Figure 2.
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ABCB4 p.Ser320Phe 16890614:58:68
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63 The mutations found in this patient are within the fifth transmembrane domain (MDR3, S320F) and in the nucleotide binding fold (BSEP, V444A).
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ABCB4 p.Ser320Phe 16890614:63:85
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81 The MDR3 mutation S320F has been shown to be specific for ICP.6 Strikingly, S320F does not result in an obvious decrease in MDR3 immunoreactivity as compared with BSEP.
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ABCB4 p.Ser320Phe 16890614:81:18
status: NEW
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ABCB4 p.Ser320Phe 16890614:81:76
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82 This is in line with recent observations that at least 4 of the 18 published severe, PFIC-3-associated, MDR3 mutations do not alter MDR3 localization.10,21,22 In conclusion, the ICP-relevant mutation S320F probably alters the activity but not the localization of MDR3.
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ABCB4 p.Ser320Phe 16890614:82:200
status: NEW
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92 Treatment options for patients with ICP include cholestyramine and ursodeoxycholate.24 To date, ursodeoxycholate seems to represent the most effective therapy, which has a beneficial effect on pruritus and liver enzyme levels.24-26 Ursodeoxycholate may also improve fetal outcome by reducing the risk of preterm delivery.26 Typically, the total amount of serum bile salts (including ursodeoxycholate) is not significantly affected by ursodeoxycholate treatment.24 However, ursodeoxycholate replaces endogenous bile salts (by about 45%), thereby reducing the absolute (and relative) amount of endogenous bile salts by almost 60%.24 In patients with PFIC-3 with severe MDR3 mutations, residual MDR3 activity was shown to be essential for a response to ursodeoxycholate treatment.22,27 The remaining activity of MDR3 in our patient with the homozygous mutation S320F may account in part for the normalization of liver enzyme levels that was induced by UDCA.
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ABCB4 p.Ser320Phe 16890614:92:858
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96 Both the mother and aunt of our patient, who were heterozygous for the MDR3 mutation S320F, had a milder course of ICP, pointing to a genotype-phenotype relationship.
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ABCB4 p.Ser320Phe 16890614:96:85
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97 Homozygosity for both the S320F MDR3 mutation and the V444A BSEP mutation may account for the severity and early onset of ICP in our patient.
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ABCB4 p.Ser320Phe 16890614:97:26
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PMID: 16696816 [PubMed] Floreani A et al: "Intrahepatic cholestasis of pregnancy: three novel MDR3 gene mutations."
No. Sentence Comment
35 MDR3 mutations reported in the literature Mutation (codon) Exon Reference (R144X) 6 Gendrot et al.5 481G>A (R150K) 6 Mu¨llenbach et al.6 426-432del (132) 6 DeVree et al.13 959C>T (S320F) 9 Rosmordurc et al.,14 Pauli-Magnus et al.9 (G535D) 14 Lucena et al.7 1669 C>A (A546D) 14 Dixon et al.4 1712 del T (571) 14 Jacquemin et al.8, 15 2285 G>A (G762E) 18 Pauli-Magnus et al.9 2901 C>T (R957X) 23 DeVree et al.13 conditions included an initial denaturation step at 94 °C for 5 min, followed by 40 cycles of denaturation at 94 °C for 30 s, annealing at 55 °C for 30 s and extension at 72 °C for 30 s.
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ABCB4 p.Ser320Phe 16696816:35:185
status: NEW
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PMID: 12891548 [PubMed] Rosmorduc O et al: "ABCB4 gene mutation-associated cholelithiasis in adults."
No. Sentence Comment
68 ABCB4 Gene Mutations in Patients With LPAC Syndrome Gene position Location and nucleotide change Peptide change Protein domain Status 6 495T3A Phe165Ile First intracellular loop Heterozygous 523T3C Thr175Ala between TM2 and TM3 Heterozygous 9 902T3C Met301Thr TM5 Heterozygous 959C3T Ser320Phe TM5 Homozygous 10 1007-1015insT 355Stop TM6 Heterozygous 1007-1015delT 341Stop TM6 Heterozygous 12 1327insA 447Stop Close to NBD11 Heterozygous 14 1584G3C Glu528Asp Close to NBD11 Heterozygous 15 1772T3A Leu591Gln Third intracellular loop Homozygous 17 1973G3A Try658Stop Third intracellular loop linker domain Heterozygous 18 2270-2273insT 793Stop Fourth intracellular loop between TM8 and TM9 Heterozygous 19 2363G3T Arg788Glu Fourth intracellular loop between TM8 and TM9 Heterozygous 23 2800G3T Ala934Thr Fifth intracellular loop between TM10 and TM11 Homozygous 26 3481C3T Pro1161Ser Close to NBD2 Heterozygous NOTE. The A of ATG of the initiator Met codon was denoted as "nucleotide ϩ 1."
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ABCB4 p.Ser320Phe 12891548:68:284
status: NEW
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105 In addition, the LPAC syndrome was observed in patients with similar nonsense or missense mutations: in a mother and her elder son with an identical heterozygous nonsense mutation (1327insA); in patients from nonconsanguineous families with the same homozygous missense mutation (Ser320Phe or Ala934Thr) with asymptomatic heterozygous parents; in patients with a similar nonsense mutation (1006-1016insT and 1006-1016delT); and in unrelated patients with the same missense mutations (Pro1161Ser).
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ABCB4 p.Ser320Phe 12891548:105:280
status: NEW
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106 In addition, the S320F mutation was recently identified in a patient who presented with ICP and cholelithiasis.5 For these reasons, all these mutations could be considered as causing the LPAC syndrome.
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ABCB4 p.Ser320Phe 12891548:106:17
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PMID: 12624161 [PubMed] Gendrot C et al: "A second heterozygous MDR3 nonsense mutation associated with intrahepatic cholestasis of pregnancy."
No. Sentence Comment
131 Two of them, from independent and non-consanguineous families, had a homozygous missense mutation in exon 9 (S320F) and the third woman had a heterozygous 1 bp insertion in exon 12 (1327insA), with an early stop codon.
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ABCB4 p.Ser320Phe 12624161:131:109
status: NEW
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169 By contrast, we did not find the six mutations of MDR3 already described in exons 6, 9, 12, 14, and 23 in patients suffering from ICP, PFIC, or cholestasis during pregnancy associated with chronic liver disease.9-13 The role of MDR3 is essential for the secretion of phosphatidylcholine into bile, as has been shown for its close murine homologue Mdr2.15 The Mdr2 knockout mouse is completely unable to secrete phosphatidylcholine into bile and develops mild liver disease, since the augmentation of free biliary bile acids alters the canalicular membrane of the hepatocyte.14 15 In patients with PFIC3, human bile salts are very hydrophobic and the absence of human phosphatidylcholine translocater coded by MDR3 results in serious liver disease.16 The apparent heterozygous status of our patient is in agreement with previous studies in consanguineous families.9 11 In these studies, women affected by ICP were heterozygous for the familial mutation, whereas patients affected by PFIC3 were homozygous.9 10 Moreover, a homozygous state for the missense mutation S320F was observed in two women suffering from chronic liver disease with clinical and biological features outside pregnancy.13 The discovery of these mutations in MDR3 opens the way for a better understanding of the pathogenesis of ICP.
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ABCB4 p.Ser320Phe 12624161:169:1064
status: NEW
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PMID: 11313316 [PubMed] Rosmorduc O et al: "MDR3 gene defect in adults with symptomatic intrahepatic and gallbladder cholesterol cholelithiasis."
No. Sentence Comment
155 Sequencing of amplified genomic DNA confirmed the homozygosity of patients 1 and 4 for mutation S320F, the heterozygosity of patients 2 and 3 for mutation 1327insA, the heterozygosity of patient 5 for mutation T175V, and the homozygosity of patient 6 for mutation P1161S.
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ABCB4 p.Ser320Phe 11313316:155:96
status: NEW
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157 Restriction endonuclease digestion also confirmed the presence of the S320F mutation in patients 1 (homozygous transition) and 1a and 1b (heterozygous transition) and the absence of mutation in healthy unrelated individuals (Figure 4).
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ABCB4 p.Ser320Phe 11313316:157:70
status: NEW
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166 This amino acid has recently been shown to be included in a very conserved cluster of 4 amino acids at position 169-172 (TRLT) in the central portion of the intracellular loop of the protein required for adenosine triphosphatase activity.19 The S320F mutation (patients 1 and 4) was located in exon 9, at the Figure 3.
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ABCB4 p.Ser320Phe 11313316:166:245
status: NEW
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186 Detection of the (S320F) point mutation in genomic DNA by restriction analysis for patients 1, 1a, and 1b.
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ABCB4 p.Ser320Phe 11313316:186:18
status: NEW
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187 The mutation (S320F) (A) creates a new HinfI site in a 210-bp PCR fragment of exon 9 and (B) removes a BamHI site.
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ABCB4 p.Ser320Phe 11313316:187:14
status: NEW
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190 Lane 1: amplified DNA fragment without enzymatic digestion; lane 2: S320F mutated homozygote (patient 1); lanes 3 and 4: S320F heterozygotes (patients 1a and 1b); lane 5: wild-type homozygote.
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ABCB4 p.Ser320Phe 11313316:190:68
status: NEW
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ABCB4 p.Ser320Phe 11313316:190:121
status: NEW
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PMID: 24953525 [PubMed] Falguieres T et al: "ABCB4: Insights from pathobiology into therapy."
No. Sentence Comment
108 The A286 V mutation was inactive, the S320F was fully active but its expression reduced to 50%, and the A953D mutation affected both the expression and the activity of ABCB4.
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ABCB4 p.Ser320Phe 24953525:108:38
status: NEW
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PMID: 25027376 [PubMed] Kubitz R et al: "Genetic variations of bile salt transporters."
No. Sentence Comment
115 A Vol. 12, 2014 Drug Discovery Today: Technologies | Transporter assays patient homozygous for p.V444A of BSEP and p.S320F of MDR3 (ABCB4), suffered from a severe form of ICP.
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ABCB4 p.Ser320Phe 25027376:115:118
status: NEW
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PMID: 25218883 [PubMed] Kamimura K et al: "Successful management of severe intrahepatic cholestasis of pregnancy: report of a first Japanese case."
No. Sentence Comment
23 For example, the combination of homozygous polymorphisms in ABCB11 at the complementary DNA position 1331 with a thymine replaced by a cytosine (1331 T > C, rs2287622), leading to an exchange from valine to alanine (V444A), and in ABCB4 at position 959 in exon 9 with a cytosine replaced by a thymine (959 C > T), leading to an exchange of serine to phenylalanine (S320F), and some other synonymous SNPs are considered to be related to the etiology of severe type of ICP [15].
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ABCB4 p.Ser320Phe 25218883:23:365
status: NEW
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PMID: 24381502 [PubMed] Kim TH et al: "Functional Characterization of ABCB4 Mutations Found in Low Phospholipid-Associated Cholelithiasis (LPAC)."
No. Sentence Comment
8 Through a membrane vesicular transport assay, we observed that the uptake of paclitaxel was significantly reduced in membrane vesicles expressing 2 ABCB4 mutations, F165I and S320F.
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ABCB4 p.Ser320Phe 24381502:8:175
status: NEW
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26 In this study, we selected 3 novel missense mutations of ABCB4 that were first reported by Rosmorduc et al. [3] and F165I 5`-AGG AAA TAG GAT GGA TTG ACA TCA ATG ACA-3` M301T 5`-GCA AAC ATT TCC ACG GGT ATT GCC TTS CTG-3` S320F 5`-AGG ACA CAA ATC AGA CAG CAT CAA AGG GAA-3` The SNP sites were marked by bold-faced letters with underlines.
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ABCB4 p.Ser320Phe 24381502:26:222
status: NEW
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56 RESULTS Mutations of ABCB4 examined in this study To perform a molecular characterization of ABCB4 muta- cDNA position Amino acid substitution Predicted domain a c.495T&#ff1e;A F165I ICD1 c.902T&#ff1e;C M301T TM5 c.959C&#ff1e;T S320F TM5 Position of each mutant was based upon the translational start site.
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ABCB4 p.Ser320Phe 24381502:56:231
status: NEW
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80 The ABCB4 mutant, F165I might be located in the ICD1, while other two mutants, M301T and S320F are located in the TM5 [3].
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ABCB4 p.Ser320Phe 24381502:80:89
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84 To exclude ATPase activity by other endogenous ABC transporters including MDR1, values for transport activity were obtained by subtracting the uptake in empty vector-transfected cells from that in cells transfected with ABCB4 reference or mutant-bearing vectors, at each corresponding paclitaxel concentration. The uptake of paclitaxel Vmax (nmol mg &#ff0d;1 per min) Km (mM) Vmax/Km ratio (nmol mg&#ff0d;1 min &#ff0d;1 per mM) Reference 28.98&#b1;1.565 1.114&#b1;0.1391 27.13&#b1;5.232 F165I 16.82&#b1;1.565* 1.028&#b1;0.1189 15.56&#b1;4.658* M301T 23.23&#b1;0.8641 1.206&#b1;0.2875 20.60&#b1;5.628 S320F 18.55&#b1;2.726* 1.185&#b1;0.1064 15.99&#b1;3.736* Data (mean&#b1;SD) are from 5 separate experiments.
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ABCB4 p.Ser320Phe 24381502:84:602
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92 was significantly reduced in membrane vesicles expressing 2 ABCB4 mutations, F165I and S320F.
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ABCB4 p.Ser320Phe 24381502:92:87
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95 We observed that the average values of Vmax/Km for F165I and S320F were significantly reduced compared to that of the ABCB4 reference.
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ABCB4 p.Ser320Phe 24381502:95:61
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100 The 2 mutations, F165I and S320F that showed decreased transport activities as compared to the reference, had significantly decreased MDR3 expression as compared to reference.
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ABCB4 p.Ser320Phe 24381502:100:27
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102 Then, we investigated MDR3 expression levels of these mutants on the plasma membrane by cell surface biotinylation and observed that those of F165I and S320F were significantly decreased by 31%, compared to that of the reference (Fig. 2B).
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ABCB4 p.Ser320Phe 24381502:102:152
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103 The results from immunoblotting or cell surface biotinylation experiments could explain the reason of altered transport activities of ABCB4 mutants, F165I and S320F; the decreased transport activities of these mutants were due to the reduced expression of functional MDR3 on the plasma membrane.
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ABCB4 p.Ser320Phe 24381502:103:159
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106 The subcellular expression of M301T was comparable with that of the reference while the co-localization of F165I and S320F with plasma membrane was decreased.
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ABCB4 p.Ser320Phe 24381502:106:117
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115 Through a membrane vesicular transport assay using paclitaxel, we found that 2 mutants, F165I and S320F, showed significantly decreased transport activity compared to the reference (Fig. 1).
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ABCB4 p.Ser320Phe 24381502:115:98
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116 F165I and S320F are located in the ICD1 and TM5 of MDR3, respectively, that might be involved in coupling the energy from ATP hydrolysis to substrate transport and the conformational change involved in substrate extrusion, respectively [3,15].
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ABCB4 p.Ser320Phe 24381502:116:10
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120 The reduced transport function of F165I and S320F mutants also might be due to the decreased expression of functional MDR3 on the plasma membrane (Fig. 2).
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ABCB4 p.Ser320Phe 24381502:120:44
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125 2 mutants, F165I and S320F, examined in this study also showed decreased transport activity and protein expression, although the extent of reduction was less than that of I541F.
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ABCB4 p.Ser320Phe 24381502:125:21
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PMID: 26324191 [PubMed] Degiorgio D et al: "ABCB4 mutations in adult patients with cholestatic liver disease: impact and phenotypic expression."
No. Sentence Comment
72 CCP chronic cholestatic profile, NCCP patients without chronic cholestatic profile, PBC primary biliary cirrhosis, PSC primary sclerosing cholangitis, ICP intrahepatic cholestasis of pregnancy, JC juvenile cholelithiasis, AIH autoimmune hepatitis, OS overlap syndrome between AIH and PBC or PSC, ICC idiopathic chronic cholestasis; a with (n = 14) or without (n = 23) other cholangiopathies in the personal/family history (see ''Methods``), b with (n = 9) or without (n = 15) other cholangiopathies in the personal/family history (see ''Methods``), c with (n = 2) or without (n = 2) other cholangiopathies in the personal/family history (see ''Methods``) Table 1 Heterozygous nucleotide changes within the ABCB4 gene identified in 18 adult patients with cholangiopathies and predicted impact on MDR3 Nucleotide changea Involved regions Type of mutation Mutant protein Location on the protein Degree of conservationb Reference genotypesc c.217C[G Exon 4 Missense p.(L73V) TM1 B 7, 21 c.475C[T Exon 6 Non-sense p.(R159X) ICD1 X 8, 14 c.523A[G Exon 6 Missense p.(T175A) ICD1 B 18, 21, 8, 25, 14 c.959C[T Exon 9 Missense p.(S320F) TM5 B 18, 8, 14 c.1529A[G Exon 13 Missense p.(N510S) N-ter NBD B 14 c.1531G[A Exon 13 Missense p.(A511T) N-ter NBD A 8, 14 c.1633C[T Exon 14 Missense p.(R545C) N-ter NBD A 21 c.1769G[A Exon 15 Missense p.(R590Q) N-ter NBD A 8, 13, 14, 25 c.1846G[A Exon 15 Missense p.(E616K) N-ter NBD A This study (JN392435) c.1901G[A Exon 16 Missense p.G634E Linker region B This study (JN392436) c.2431G[C Exon 20 Missense p.(G811R) ICD4 A This study (JN392437) c.2544_2548delATCAT Exon 21 Frameshift p.(S849YfsX24) TM9 X This study (JN392438) c.2576T[G Exon 21 Missense p.(L859W) TM10 B This study (JN392439) c.2844G[C Exon 23 Missense p.(M948I) TM11 B This study (JN392440) c.3541C[T Exon 27 Non-sense p.(Q1181X) C-ter NBD X This study (JN392441) TM transmembrane domain, ICD intracellular domain, N-ter NBD N-terminal nucleotide binding domain, C-ter NBD C-terminal nucleotide binding domain a The mutations were numbered according to GenBank NM_018849 and NP_061337.
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ABCB4 p.Ser320Phe 26324191:72:1120
status: NEW
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76 A second group of seven mutations is ascribed to type B [p.(L73V), p.(T175A), p.(N510S), p.(G634E), p.(L859W), and p.(M948I); and p.(S320F)] (Figs. 2, 3, residues in blue).
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ABCB4 p.Ser320Phe 26324191:76:133
status: NEW
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81 L73V T175A S320F N510S A511T R590Q E616K R545C G634E G811R L859W M948I ...69_SGLPLMMIV_77... ...69_SGLPLMMIV_77... ...66_SGLPLMMIV_74... ...66_SGLPLMMIV_74... ...69_SGLPLMMIV_77... ...69_SGLPLMMIV_77... ...67_SGLPLMMIV_75..... ...63_AGLPLMMLV_71... ...92_LGFPIMTIL_100.. ...59_MSEPLMTVV_67... ...77_GFAMPALTI_85... ...79_ASFPIMSIL_87... ..107_LGMPLMSLV_115.. ...89_AGLPLMSIL_97... ...39_ASDTFMLSL_47... ...39_ASDTFMLSL_47... ...39_AADTYMISL_47... ...28_GIPMLIPLL_36... 171_TELNTRLTD_179... 171_TELNTRLTD_179... 168_TELNTRLTD_176... 168_TELNTRLTD_176... 171_TELNTRLTD_179... 171_TELNTRLTD_179... 169_TELNTRLTD_177... 169_GELNTRLTD_177... 180_GEVVGRMSG_188... 146_GEAASRISA_154.. 164_GEVVGRMSG_172.. 167_GEVVGRMSG_175.. 197_GEITTRITT_205.. 193_GTLATKLFD_201.. 122_GTLLSRITY_130... 122_GTLLSRITY_130... 122_GGLLSRITY_130... 118_GQVISRVIN_126... 586_VIAHRLSTV_594... 586_VIAHRLSTV_594... 583_VIAHRLSTI_591... 583_VIAHRLSTV_591... 586_VIAHRLSTI_594... 586_VIAHRLSTI_594... 584_VIAHRLSTI_592... 584_VIAHRLSTV_592... 595_VVAHRLSTV_603... 561_IVAHRLSTI_569... 579_VIAHRLTTI_587... 582_IVAHRLSTV_590... 621_VIAHRLSTI_629... 608_IIAHRLSTI_616... 534_VIAHRLSTI_542... 534_VIAHRLSTI_542... 534_VIAHRLSTI_542... 531_IVAHRLSTI_539... 316_FWYGSTLVI_324... 316_FWYGSTLVI_324... 313_FWYGSTLVI_321... 313_FWYGSTLVI_321... 316_FWYGSTLVI_324... 316_FWYGSTLVI_324... 314_FWYGSTLVI_322... 314_FWYGTTLVL_322... 325_VWYGGKMIL_333... 291_FWYGAKLVI_299... 309_LWYGSKLVL_317... 312_IWFGGKMIL_320... 342_FWEGGRLLH_350... 338_FYIGVGWVH_346... 267_LYAASFPSV_275... 267_LYAASFPSV_275... 267_LFLASVDSI_275... 263 IGVGAYLAI 271... 506_VKEANAYEFI_515... 506_VKEANAYEFI_515... 503_VKEANAYDFI_512... 503_VKEANAYDFI_512... 506_VKEANAYEFI_515... 504_VKEANAYEFI_513... 504_VKDANAYEFI_513... 504_VKEANAYDFI_513... 515_TELANASKFI_524... 481_AELANAANFI_490... 499_AYLANAARFI_508... 502_TELANAAKFI_511... 541_AKLANAYDFI_550... 528_CKMANAEKFI_537... 454_ARMAYAMDFI_463... 454_ARMAYAMDFI_463... 454_ARQAHAMEFI_463... 451_AKMANAHDFI_460... 541_IAIARALVR_549... 541_IAIARALVR_549... 538_IAIARALVR_546... 538_IAIARALVR_546... 541_IAIARALVR_549... 541_IAIARALVR_549... 539_IAIARALVR_547... 539_IAIARALVR_547... 550_IAVARAILK_558... 516_IAIARAILK_524... 534_VAIARAILK_542... 537_IAIARAILK_545... 576_IAIARAVIS_584... 563_IAIARALVR_571... 489_IAIARALLR_497... 489_IAIARALLR_497... 489_VAIARALLR_497... 486_LSIARIFLN_494... ...612_GSHSELMKK_620... ...612_GSHSELMKK_620... ...609_GSHSELMKK_617... ...609_GSHSELIKK_617... ...612_GSHGELMKK_620... ...612_GNHRELMKK_620... ...610_GSHNELMKK_618... ...610_GNHDELMKE_618... ...621_GSHSELLRD_629... ...587_GSHDELIKD_595... ...605_GTHFDLVQR_613... ...608_GSHSELLKD_616... ...647_GSHNELLDL_655... ...634_GDHRALMAQ_642... ...560_GTHNDLLEH_568... ...560_GTHSELLAQ_568... ...560_GRHADLLAQ_568... ...557_GTHRELIAK_565... 630_MQTSGSQIQ_638... 630_MQTSGSQIQ_638... 627_MQTAGSQIL_635... 627_MQTSGSQIL_635... 630_TQISGSQIQ_638... 630_MQTSGNQTQ_638... 628_MQTSGNQIQ_636... 628_MQTAGNEVE_636... 640_LQEDTKQTE_648... 620_SEVSTSRLK_628... 624_LQEMHQPPP_632... 627_LQEVNKESK_635... 666_QKLSGGEKD_674... 652_AQTFTDAVD_660... 578_MQFGQ----_582... 578_MQFGQ----_582... 578_IQFGE----_582... 575_IQNL-----_578... 807_KNSTGALST_815... 807_KNSTGALST_815... 804_KNSTGALST_812... 806_KNSTGALST_814... 804_KNSTGALST_812... 809_KNSTGALST_817... 806_KNSTGALST_814... 808_KNTTGALTT_816... 825_ENSSGAIGA_833... 797_SHSSGSLGA_805... 835_ENSSGALGA_843... 822_EHSSGAIGA_830... 891_ENTVGAITT_899... 849_QNASGKIST_857... 118_KQSTGTLLS_126... 118_KQSTGTLLS_126... 118_QESTGGLLS_126... 114_NNQVGQVIS_122... 855_QLTLLLLAV_863.... 855_QLTLLLLAV_863.... 852_QLTLLLLSV_860.... 854_QLTLLLLSV_862.... 852_QLTLLLLSV_860.... 857_QLTLLLLVV_865.... 854_QLTLLLLSV_862.... 856_QLTLLLLAI_864.... 873_QLAFIVLAM_881.... 845_KLTLTIMCP_853.... 883_QLALLVLAL_891.... 870_QLALVILVL_878.... 939_KLGLVTLST_947... 897_QMALLIIAI_905.... 166_QLSIILIVL_174.... 166_QLSIILVVL_174.... 166_QLSLVLIVV_174.... 162_KLTLAALFI_170.... 944_SQAFMYFSY_952... 944_SQAFMYFSY_952... 941_SQAFMYFSY_949... 943_SQAFMYFSY_951... 941_SQAFMYFSY_949... 946_SQAFMYFSY_954... 943_SQAFMYFSY_951... 945_TQAMMYFSY_953... 962_SFFVLFSSY_970... 940_SYLMVYLTY_948... 972_SNFVLFGSY_980... 959_SFFLLFSVY_967... 1028_AQGVTFLIN_1036.. 986_ASSVLYLLN_994... 255_IQLIASLAL_263... 255_IQLIASLAL_263... 255_IQMIASLAL_263... 251_INTVTDIGP_259... Hs_MDR3 Pt_MDR3 Mm_MDR3 Rn_MDR3 Bt_MDR3 Cf_MDR3 Md_MDR3 Hs_MDR1 At_MDR Os_MDR Sm_MDR Ptr_MDR Sp_MDR Ce_P-gly Esch-coli_Msba Salm-typh_Msba Vibrio-ch_Msba Staph-au_Sav1866 Hs_MDR3 Pt_MDR3 Mm_MDR3 Rn_MDR3 Bt_MDR3 Cf_MDR3 Md_MDR3 Hs_MDR1 At_MDR Os_MDR Sm_MDR Ptr_MDR Sp_MDR Ce_P-gly Esch-coli_Msba Salm-typh_Msba Vibrio-ch_Msba Staph-au_Sav1866 Fig. 2 Multiple sequence alignment of 18 ABC proteins concerning the amino acid sequences around the 12 ABCB4 missense mutations identified in this study.
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ABCB4 p.Ser320Phe 26324191:81:11
status: NEW
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99 When the 19 patients affected by PBC, AIH, or OS, in whom PFH-CLD was among the enrollment criteria, were excluded from the analysis, the S320F L859W L73V M948I N-ter T175A G811R R545C A511T N510S R590Q E616K G634E C-ter Fig. 3 Ribbon representation of the three-dimensional structure of human MDR3.
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ABCB4 p.Ser320Phe 26324191:99:138
status: NEW
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141 p.(S320F) Yes JC/HIC 16 F PSC 55 p.(R590Q) Yes 7 M ICC 16 p.(R545C) Yes JC Father of patient 72 18a,b M ICC 34 p.(S849YfsX24) Yes JC Family history of JC 49 F ICC 32 p.(G811R) Yes ICP/JC Family history of JC 72 F ICC 12 p.(R545C) Yes ICP/JC Daughter of patient 72 68 F PBC 31 p.(T175A) No ICP 73a F PBC 58 p.(R590Q) Yes JC 75 F PBC 64 p.(L73V) No JC 38 M JC 18 p.(S320F) No 55 M JC 26 p.(Q1181X) Yes 81 F JC 39 p.(R590Q) ?
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ABCB4 p.Ser320Phe 26324191:141:3
status: NEW
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ABCB4 p.Ser320Phe 26324191:141:364
status: NEW
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142 p.(M948I) Yes 48 F ICP 37 p.(L859W) No JC 88 F ICP 27 p.(S320F) No HIC PSC primary sclerosing cholangitis, ICC idiopathic chronic cholestasis, PBC primary biliary cirrhosis, JC juvenile cholelithiasis, ICP intrahepatic cholestasis of pregnancy, IBD inflammatory bowel disease, HIC hormone-induced cholestasis, OLT orthotopic liver transplantation a With cirrhosis b With major complications of portal hypertension c Radical mutation is considered highly deleterious for protein function (see ''Methods``) associated with cholesterol increase [11].
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ABCB4 p.Ser320Phe 26324191:142:57
status: NEW
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