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PMID: 17541014
Rowe SM, Varga K, Rab A, Bebok Z, Byram K, Li Y, Sorscher EJ, Clancy JP
Restoration of W1282X CFTR activity by enhanced expression.
Am J Respir Cell Mol Biol. 2007 Sep;37(3):347-56. Epub 2007 May 31.,
[PubMed]
Sentences
No.
Mutations
Sentence
Comment
0
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:0:15
status:
NEW
view ABCC7 p.Trp1282* details
Restoration of
W1282X
CFTR Activity by Enhanced Expression Steven M. Rowe, Karoly Varga, Andras Rab, Zsuzsa Bebok, Kevin Byram, Yao Li, Eric J. Sorscher, and John P. Clancy Departments of Medicine, Pediatrics, and Physiology and Biophysics, the Gregory Fleming James Cystic Fibrosis Research Center; and Department of Cell Biology, University of Alabama at Birmingham, Birmingham, Alabama Cystic fibrosis results from mutations in the cystic fibrosis transmembrane conductance regulator (CFTR) gene.
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3
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:3:107
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:3:118
status:
NEW
view ABCC7 p.Arg1162* details
We studied two well-described premature termination codons found in the distal open reading frame of CFTR,
W1282X
and
R1162X
, expressed in polarizing and nonpolarizing cells.
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4
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:4:27
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:4:137
status:
NEW
view ABCC7 p.Arg1162* details
Our findings indicate that
W1282X
CFTR-expressing cells demonstrate significantly greater CFTR activity when overexpressed compared with
R1162X
CFTR cells, even when truncated protein is the predominant form.
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6
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:6:37
status:
NEW
view ABCC7 p.Trp1282* details
These findings provide evidence that
W1282X
CFTR exhibits membrane localization and retained chloride channel function after enhanced expression, and suggest that patients harboring this mutation may be more susceptible to CFTR rescue.
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16
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:16:104
status:
NEW
view ABCC7 p.Trp1282* details
Importantly, all subjects with nonsense mutations in both of these studies carried at least one copy of
W1282X
CFTR, a PTC that is particularly common in this population (found in up to 40% of Israeli patients with CF) (5, 16, 17).
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21
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:21:64
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:21:259
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:21:248
status:
NEW
view ABCC7 p.Arg1162* details
Based on the promising clinical findings in patients possessing
W1282X
CFTR, coupled with variable in vivo responses to premature stop suppression, we designed experiments to examine the effects of stop codon site on two common PTCs found in CFTR (
R1162X
and
W1282X
).
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22
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:22:54
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:22:237
status:
NEW
view ABCC7 p.Trp1282* details
Our results indicate CLINICAL RELEVANCE Evidence that
W1282X
cystic fibrosis transmembrane conductance regulator (CFTR) retains chloride channel function improves our understanding of CFTR biology, and may explain why subjects harboring
W1282X
CFTR appear more susceptible to the strategy of premature termination codon suppression.
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24
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:24:266
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:24:286
status:
NEW
view ABCC7 p.Arg1162* details
E-mail: smrowe@ uab.edu Am J Respir Cell Mol Biol Vol 37. pp 347-356, 2007 Originally Published in Press as DOI: 10.1165/rcmb.2006-0176OC on May 31, 2007 Internet address: www.atsjournals.org that enhanced expression is sufficient to restore measurable activity to
W1282X
CFTR but not
R1162X
CFTR.
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26
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:26:66
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:26:89
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:26:77
status:
NEW
view ABCC7 p.Arg1162* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:26:100
status:
NEW
view ABCC7 p.Arg1162* details
MATERIALS AND METHODS Development of Stable Cell Lines Expressing
W1282X
and
R1162X
CFTR
W1282X
and
R1162X
CFTR cDNA were stably introduced into HeLa and CFBE41o-cells using TranzVector (Tranzyme, Inc., Birmingham, AL).
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50
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:50:72
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:50:80
status:
NEW
view ABCC7 p.Arg1162* details
SPQ Studies of Halide Efflux in HeLa Cells HeLa cells stably expressing
W1282X
,
R1162X
, or wild type CFTR were studied with the halide quenched dye 6-methoxy-N-(3-sulfopropyl)- quinolinium (SPQ; Molecular Probes, Inc., Eugene, OR) as previously described (27, 29).
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63
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:63:35
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:63:45
status:
NEW
view ABCC7 p.Arg1162* details
Briefly, CFBE41o2 cells expressing
W1282X
or
R1162X
CFTR were seeded on Costar 0.4-mm permeable supports (5 3 105 cells/filter, 6.5 mm diameter; Bethesda, MD) after coating with fibronectin as previously described (32).
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72
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:72:13
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:72:33
status:
NEW
view ABCC7 p.Arg1162* details
The CFBE41o2
W1282X
and CFBE41o2
R1162X
cells were handled in exactly the same fashion during our studies.
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85
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:85:53
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:85:336
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg553*
X
ABCC7 p.Arg553* 17541014:85:317
status:
NEW
view ABCC7 p.Arg553* details
ABCC7 p.Gly542*
X
ABCC7 p.Gly542* 17541014:85:310
status:
NEW
view ABCC7 p.Gly542* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:85:324
status:
NEW
view ABCC7 p.Arg1162* details
RESULTS Preferential Enhancement of CFTR Activity in
W1282X
CFTR Expressing Cells by Sodium Butyrate Previous studies have examined the function of several CFTR molecules containing clinically relevant premature stop codons in transient, high-level expression systems using nonpolarizing cell types (including
G542X
,
R553X
,
R1162X
, and
W1282X
CFTR), with variable levels of constitutive and regulated CFTR activity described (7, 8, 33).
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88
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:88:41
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:88:30
status:
NEW
view ABCC7 p.Arg1162* details
We limited our comparisons to
R1162X
and
W1282X
CFTR in readily comparable model systems widely used in CF research.
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89
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:89:142
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:89:83
status:
NEW
view ABCC7 p.Arg1162* details
These two mutants occur in the distal portion of CFTR (immediately after TMD-2 for
R1162X
CFTR, and approximately one third through NBD-2 for
W1282X
CFTR).
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91
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:91:80
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:91:64
status:
NEW
view ABCC7 p.Arg1162* details
Figure 1 summarizes functional studies in HeLa cells expressing
R1162X
CFTR and
W1282X
CFTR.
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94
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:94:106
status:
NEW
view ABCC7 p.Trp1282* details
In Figure 1A, increasing concentrations of NaBu exposure led to dramatic increases in halide transport in
W1282X
CFTR-transduced cells.
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95
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:95:56
status:
NEW
view ABCC7 p.Arg1162* details
By contrast, NaBu had little effect on halide efflux in
R1162X
CFTR (Figure 1B).
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99
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:99:0
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:99:92
status:
NEW
view ABCC7 p.Arg1162* details
W1282X
CFTR-expressing cells had significantly increased agonist-stimulated Isc relative to
R1162X
CFTR-expressing cells at baseline (no NaBu treatment).
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102
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:102:20
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:102:31
status:
NEW
view ABCC7 p.Arg1162* details
Halide transport in
W1282X
and
R1162X
CFTR transduced HeLa cells.
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103
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:103:55
status:
NEW
view ABCC7 p.Trp1282* details
(A) Fluorescence-based halide efflux (SPQ) activity of
W1282X
CFTR HeLa cells after treatment with increasing concentrations of NaBu or control (vehicle media) for 24 h. Closed arrowhead represents basal CFTR activity after switch to dequenched buffer, and the open arrowhead signifies fluorescence after the addition of CFTR agonists forskolin (20 mM) and genistein (50 mM).
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104
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:104:19
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:104:40
status:
NEW
view ABCC7 p.Arg1162* details
* Halide efflux of
W1282X
compared with
R1162X
CFTR transduced cells was significantly increased after treatment with NaBu (P , 0.001, 6 SEM).
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105
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:105:38
status:
NEW
view ABCC7 p.Arg1162* details
(B) Parallel experiments performed in
R1162X
CFTR HeLa cells showing no activation of halide efflux after CFTR stimulation.
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107
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:107:77
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:107:118
status:
NEW
view ABCC7 p.Arg1162* details
with NaBu, further enhancement of agonist-stimulated Isc was demonstrated in
W1282X
CFTR-transduced cells relative to
R1162X
CFTR.
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108
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:108:33
status:
NEW
view ABCC7 p.Arg1162* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:108:124
status:
NEW
view ABCC7 p.Arg1162* details
The negative results seen in the
R1162X
CFTR cells demonstrate that NaBu has no detectable functional effects on either the
R1162X
CFTR transgene or endogenous DF508 CFTR expressed in these cells (albeit at extremely low levels [32]).
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109
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:109:150
status:
NEW
view ABCC7 p.Trp1282* details
Together, the studies in both HeLa and CFBE41o2 cell lines demonstrate similar results: NaBu treatment has unique effects on halide transport only in
W1282X
CFTR-expressing cells.
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111
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:111:43
status:
NEW
view ABCC7 p.Trp1282* details
NaBu treatment results in increased Isc in
W1282X
expressing cells.
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114
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:114:57
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:114:80
status:
NEW
view ABCC7 p.Arg1162* details
(A) Representative tracings in CFBE41o2 cells expressing
W1282X
CFTR (left) and
R1162X
CFTR (right) after treatment with NaBu (500 mM) or control conditions for 24 h.
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115
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:115:34
status:
NEW
view ABCC7 p.Trp1282* details
Experiments show increased Isc in
W1282X
CFTR-transduced CFBE41o2 cells pretreated with NaBu after forskolin (forsk, 20 mM) and genistein (gen, 50 mM) stimulation.
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118
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:118:45
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:118:68
status:
NEW
view ABCC7 p.Arg1162* details
(B) Summary data of CFBE41o-cells expressing
W1282X
(solid bars) or
R1162X
CFTR (open bars) exposed to various concentrations of NaBu versus control (vehicle media) for 24 h, then studied in modified Ussing chambers under voltage clamp conditions.
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119
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:119:39
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:119:60
status:
NEW
view ABCC7 p.Arg1162* details
Short-circuit currents were greater in
W1282X
compared with
R1162X
CFTR-transduced cells under control and NaBu-treated conditions.
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121
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:121:24
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:121:71
status:
NEW
view ABCC7 p.Arg1162* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:121:136
status:
NEW
view ABCC7 p.Arg1162* details
*P , 0.05 compared with
W1282X
control, ‡P , 0.05 compared with
R1162X
at same condition, ‡‡P , 0.01 compared with
R1162X
at same condition, (6 SEM).
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122
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:122:26
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:122:15
status:
NEW
view ABCC7 p.Arg1162* details
Enhancement of
R1162X
and
W1282X
CFTR Expression by Sodium Butyrate NaBu has been shown to deacetylate the CMV promoter and enhance expression of transgenes in other model systems (34-36).
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123
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:123:107
status:
NEW
view ABCC7 p.Trp1282* details
To better understand the mechanism of the activating effects of NaBu in HeLa and CFBE41o2 cells expressing
W1282X
CFTR, we measured mutant CFTR expression at the mRNA and protein level.
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124
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:124:51
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:124:62
status:
NEW
view ABCC7 p.Arg1162* details
Figure 3 demonstrates that under basal conditions,
W1282X
and
R1162X
CFTR-transduced cells exhibit slightly greater CFTR mRNA levels relative to endogenous CFTR in Calu-3 cells (Figure 3A); however, protein expression across the three cell lines are qualitatively similar, probably due to differences in processing efficiency between the native and transduced genes (32).
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125
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:125:63
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:125:52
status:
NEW
view ABCC7 p.Arg1162* details
Figure 4 summarizes real-time PCR studies comparing
R1162X
and
W1282X
CFTR expression in HeLa and CFBE41o2 cells.
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126
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:126:149
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:126:139
status:
NEW
view ABCC7 p.Arg1162* details
Figure 4A shows dose-response studies with NaBu in transduced HeLa cells, and Figure 4B shows similar studies in CFBE41o2 cells expressing
R1162X
or
W1282X
CFTR.
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127
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:127:56
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:127:45
status:
NEW
view ABCC7 p.Arg1162* details
NaBu led to dose-dependent increases in both
R1162X
and
W1282X
CFTR mRNA levels in HeLa cells, with similar enhancing effects seen in CFBE41o2 cells.
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132
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:132:34
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:132:23
status:
NEW
view ABCC7 p.Arg1162* details
Relative expression of
R1162X
and
W1282X
CFTR in transduced HeLa cells is similar to the Calu-3 type.
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133
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:133:15
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:133:4
status:
NEW
view ABCC7 p.Arg1162* details
(A)
R1162X
and
W1282X
CFTR transduced HeLa cells grown to confluence and then assayed by RT-PCR after RNA isolation showed mRNA expression within 3-fold compared with endogenously expressing Calu-3 cells.
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138
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:138:41
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:138:30
status:
NEW
view ABCC7 p.Arg1162* details
Relative transcript levels of
R1162X
and
W1282X
CFTR in transduced HeLa (A) and CFBE41o2 (B) cells.
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141
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:141:0
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:141:61
status:
NEW
view ABCC7 p.Arg1162* details
W1282X
CFTR mRNA levels under control conditions were 72% of
R1162X
CFTR expression.
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146
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:146:61
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:146:0
status:
NEW
view ABCC7 p.Arg1162* details
R1162X
CFTR mRNA levels under control conditions were 83% of
W1282X
expression levels.
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149
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:149:184
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:149:239
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:149:195
status:
NEW
view ABCC7 p.Arg1162* details
Together, the results from Figures 1-6 provide evidence that NaBu enhanced the expression of truncated CFTR (without significantly increasing the level of full-length protein) in both
W1282X
and
R1162X
CFTR-expressing cells; moreover only
W1282X
CFTR-expressing cells demonstrated increased agonist stimulated ion transport after NaBu treatment.
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150
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:150:84
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:150:73
status:
NEW
view ABCC7 p.Arg1162* details
Synergistic Effects of Stop Codon Suppression and Enhanced Expression in
R1162X
and
W1282X
CFTR-Expressing Cells We next examined the effects of NaBu combined with G418 (an aminoglycoside and previously described potent suppressor of premature stop mutations) on full-length CFTR production in HeLa and CFBE41o2 cells transduced with either of the two CFTR premature stop codons of interest.
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152
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:152:242
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:152:232
status:
NEW
view ABCC7 p.Arg1162* details
Treatment with the combination of NaBu and G418 for 16 hours led to increased full-length core glycosylated (band B) and fully glycosylated (band C) CFTR production in HeLa (Figure 6A) and CFBE41o2 (Figure 6B) cells transduced with
R1162X
or
W1282X
CFTR.
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156
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:156:37
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:156:83
status:
NEW
view ABCC7 p.Arg1162* details
To confirm the presence of truncated
W1282X
CFTR at the cell surface compared with
R1162X
-expressing cells, immunofluorescence studies were performed.
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158
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:158:68
status:
NEW
view ABCC7 p.Trp1282* details
A high proportion of cells positive for surface-localized truncated
W1282X
CFTR was detectable after treatment with NaBu alone (55% of cells, P , 0.001 versus control, probed with anti-NBD-1 antibody).
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160
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:160:248
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:160:13
status:
NEW
view ABCC7 p.Arg1162* details
In contrast,
R1162X
CFTR-transduced cells demonstrated overall lower surface expression of both full-length and truncated protein (controlled for treatment condition), reflecting less efficient surface localization of truncated protein relative to
W1282X
CFTR (P , 0.001 by logistic regression analysis).
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162
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:162:75
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:162:85
status:
NEW
view ABCC7 p.Arg1162* details
Full-length CFTR expression after NaBu, G418, and combination treatment in
W1282X
or
R1162X
CFTR-transduced HeLa (A) and CFBE41o2 (B) cells.
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163
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:163:105
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:163:116
status:
NEW
view ABCC7 p.Arg1162* details
(A) Immunoprecipitation with C-terminus-specific antibody (24-1) followed by in vitro phosphorylation of
W1282X
and
R1162X
CFTR-transduced HeLa cells is shown.
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169
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:169:34
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:169:23
status:
NEW
view ABCC7 p.Arg1162* details
Detection of truncated
R1162X
and
W1282X
CFTR in HeLa (A) and CFBE41o2 (B) cells.
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170
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:170:102
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:170:113
status:
NEW
view ABCC7 p.Arg1162* details
(A) HeLa Cells were selectively probed for truncated CFTR using an antibody directed against NBD-1 in
W1282X
and
R1162X
CFTR-transduced cells.
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174
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:174:38
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:174:71
status:
NEW
view ABCC7 p.Arg1162* details
NaBu treatment significantly enhanced
W1282X
(z 140 kD, left panel) or
R1162X
(z 110 kD, right panel) CFTR protein expression.
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177
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:177:44
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:177:55
status:
NEW
view ABCC7 p.Arg1162* details
The synergistic effects of G418 and NaBu on
W1282X
and
R1162X
CFTR activity were also measured by SPQ (Figure 8).
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178
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:178:49
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:178:171
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:178:160
status:
NEW
view ABCC7 p.Arg1162* details
The top portion shows examples of experiments in
W1282X
CFTR-expressing cells, and the bottom portion summarizes results from multiple paired studies comparing
R1162X
and
W1282X
CFTR-expressing cells.
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180
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:180:75
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:180:238
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:180:64
status:
NEW
view ABCC7 p.Arg1162* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:180:301
status:
NEW
view ABCC7 p.Arg1162* details
G418 treatment had positive effects on halide transport in both
R1162X
and
W1282X
CFTR-expressing cells (reflecting readthrough of PTCs), and NaBu treatment had significantly stronger effects on agonist stimulated halide transport in the
W1282X
CFTR-expressing cells relative to cells transduced with
R1162X
CFTR.
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181
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:181:98
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:181:156
status:
NEW
view ABCC7 p.Arg1162* details
Combination treatment with G418 and NaBu dramatically increased halide efflux in cells expressing
W1282X
CFTR, with smaller synergistic effects seen in the
R1162X
CFTR-transduced cells.
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182
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:182:227
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:182:238
status:
NEW
view ABCC7 p.Arg1162* details
Together, the results from Figures 6-8 provide evidence for synergistic effects on CFTR activity and surface localization produced by enhanced expression (NaBu treatment) coupled with stop codon suppression (G418 treatment) in
W1282X
and
R1162X
CFTR-transduced cells, and further emphasize apparent differences in the relative susceptibility of these CFTR mutations to functional rescue.
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184
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:184:66
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:184:55
status:
NEW
view ABCC7 p.Arg1162* details
We identified distinct differences in the responses of
R1162X
and
W1282X
CFTR to treatment designed to enhance transgene expression (NaBu).
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186
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:186:124
status:
NEW
view ABCC7 p.Trp1282* details
However immunohistochemical detection using anti-NBD-1 antibody revealed significantly greater cell surface localization of
W1282X
CFTR Figure 7.
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187
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:187:62
status:
NEW
view ABCC7 p.Trp1282* details
NaBu increases surface-localized truncated CFTR expression in
W1282X
CFTR-expressing cells as detected by immunofluorescence.
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188
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:188:35
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:188:53
status:
NEW
view ABCC7 p.Arg1162* details
(A) Immunofluorescence staining of
W1282X
(left) and
R1162X
CFTR (right)-expressing HeLa cells after 24 h exposure to NaBu (2.5mM), NaBu 1 G418 (500 mg/ml), or untreated (vehicle control) conditions.
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190
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:190:0
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:190:162
status:
NEW
view ABCC7 p.Arg1162* details
W1282X
CFTR-transduced cells demonstrate significantly greater number of cells with surface localized truncated CFTR after 24 h treatment with NaBu compared with
R1162X
cells (55.2% versus 10.4% of cells with surface staining, respectively; P , 0.001).
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191
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:191:171
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:191:205
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:191:354
status:
NEW
view ABCC7 p.Arg1162* details
A significant number of cells with surface localized full-length CFTR is detected in both cell lines after the addition of G418, although a greater percentage was seen in
W1282X
-transduced cells (29.1% of
W1282X
cells exhibit surface staining after G418 1 NaBu versus 0.5% under control conditions, P , 0.001; 5.4% and 0.06% surface staining was seen in
R1162X
cells, respectively, P , 0.01).
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195
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:195:83
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:195:97
status:
NEW
view ABCC7 p.Arg1162* details
*P , 0.05 versus control condition for each cell type; †P , 0.001 comparing
W1282X
versus
R1162X
cells at exact same treatment condition.
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197
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:197:13
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:197:29
status:
NEW
view ABCC7 p.Arg1162* details
Furthermore,
W1282X
(but not
R1162X
) CFTR activity was partially restored in both cell lines after treatment with NaBu alone (Figures 1, 2, and 8).
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199
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:199:64
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:199:190
status:
NEW
view ABCC7 p.Trp1282* details
Together, our results suggest that increasing the expression of
W1282X
CFTR was sufficient to restore partial CFTR activity, and this effect was likely due to retained function of truncated
W1282X
CFTR that localizes to the plasma membrane.
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200
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:200:52
status:
NEW
view ABCC7 p.Arg1162* details
In contrast, increasing expression of the truncated
R1162X
CFTR did not restore functional activity.
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203
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:203:137
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:203:161
status:
NEW
view ABCC7 p.Arg1162* details
Because mRNA levels were similar after NaBu treatment for both mutations, enhanced efficiency of cellular processing and localization of
W1282X
CFTR relative to
R1162X
likely account for the observed differences.
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207
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:207:67
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:207:180
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:207:3
status:
NEW
view ABCC7 p.Arg1162* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:207:169
status:
NEW
view ABCC7 p.Arg1162* details
As
R1162X
CFTR is truncated immediately after the TMD-2 domain and
W1282X
CFTR is truncated within the NBD-2 domain, our results suggest that critical sequences between
R1162X
and
W1282X
may be responsible for functional differences between the mutations.
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208
ABCC7 p.Ser1455*
X
ABCC7 p.Ser1455* 17541014:208:157
status:
NEW
view ABCC7 p.Ser1455* details
Supporting this hypothesis, Mickle and coworkers reported that a disease-causing CFTR mutation produced by a PTC located 26 amino acids from the C-terminus (
S1455X
CFTR) retains partial function and demonstrates a mild pulmonary phenotype (but abnormal ion transport in the sweat gland [42]).
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209
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:209:149
status:
NEW
view ABCC7 p.Trp1282* details
Our findings are also in agreement with single channel studies recently reported by Wang and colleagues, in which low-level activity was retained in
W1282X
CFTR expressing HeLa cells without treatments to enhance protein expression (43).
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210
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:210:34
status:
NEW
view ABCC7 p.Trp1282* details
Moreover, surface localization of
W1282X
CFTR in HeLa cells was confirmed using a biotinylation assay.
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213
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:213:34
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:213:45
status:
NEW
view ABCC7 p.Arg1162* details
CFTR-mediated halide transport in
W1282X
and
R1162X
CFTR-transduced HeLa cells studied by SPQ.
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214
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:214:35
status:
NEW
view ABCC7 p.Trp1282* details
Top: representative experiments in
W1282X
CFTR-transduced cells at various conditions.
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215
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:215:101
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:215:111
status:
NEW
view ABCC7 p.Arg1162* details
Bottom: change in halide transport after stimulation with forskolin (20 mM) and genistein (50 mM) in
W1282X
or
R1162X
CFTR-transduced HeLa cells.
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217
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:217:37
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:217:115
status:
NEW
view ABCC7 p.Arg1162* details
Results demonstrate CFTR activity in
W1282X
CFTR-transduced cells after treatment with NaBu that is not present in
R1162X
CFTR-transduced cells.
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218
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:218:90
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:218:104
status:
NEW
view ABCC7 p.Arg1162* details
*P , 0.001 for treated conditions compared with untreated controls, †P , 0.001 for
W1282X
versus
R1162X
under identical conditions, n 5 30 cells/condition, 6 SEM.
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221
ABCC7 p.Arg553*
X
ABCC7 p.Arg553* 17541014:221:151
status:
NEW
view ABCC7 p.Arg553* details
ABCC7 p.Gly542*
X
ABCC7 p.Gly542* 17541014:221:141
status:
NEW
view ABCC7 p.Gly542* details
In previously published studies, our laboratory has reported that high-level expression of the two most common CFTR premature stop mutations
G542X
and
R553X
CFTR (using transient vaccinia-based expression in non-polarizing cells) led to constitutive halide transport function lacking cAMP-dependent regulation (8, 27).
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224
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:224:158
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:224:147
status:
NEW
view ABCC7 p.Arg1162* details
The similar findings between the two cell types studied here (airway and nonairway) suggest that fundamental differences in cellular processing of
R1162X
and
W1282X
CFTR are retained across both model systems.
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225
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:225:189
status:
NEW
view ABCC7 p.Trp1282* details
Studies examining PKA-dependent and independent regulation of the two mutations will be needed to determine if cellular differences are also seen in regards to cAMP activation of truncated
W1282X
CFTR (as is seen with DF508 CFTR expressed in these two cell types) (32).
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230
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:230:39
status:
NEW
view ABCC7 p.Trp1282* details
In the context of adequate expression,
W1282X
CFTR function could be demonstrated at the cell membrane of both polarizing and nonpolarizing cell types.
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231
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:231:100
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:231:238
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:231:89
status:
NEW
view ABCC7 p.Arg1162* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:231:262
status:
NEW
view ABCC7 p.Arg1162* details
While our studies demonstrate distinct differences in truncated protein activity between
R1162X
and
W1282X
CFTR, they do not rule out the possibility that NaBu treatment leads to enhanced levels of background translational readthrough of
W1282X
CFTR relative to
R1162X
CFTR.
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232
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:232:53
status:
NEW
view ABCC7 p.Trp1282* details
In fact, this is suggested by a higher proportion of
W1282X
cells with detectable full-length CFTR at the cell surface of NaBu-treated HeLa cells (13.6 versus 3.7% of cells, respectively; Figure 7).
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233
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:233:244
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:233:334
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:233:234
status:
NEW
view ABCC7 p.Arg1162* details
Background readthrough is not likely to account for all the findings presented here, as combination treatment with NaBu and G418 led to similar levels of total (surface and nonsurface) full-length CFTR in cell lines expressing either
R1162X
or
W1282X
CFTR (Figures 6A and 6B), but NaBu alone led to much larger increases in truncated
W1282X
CFTR activity (Figures 1 and 2).
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234
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:234:281
status:
NEW
view ABCC7 p.Trp1282* details
Further studies directly comparing protein expression and function from CFTR cDNAs containing premature stop codons with and without distal CFTR open reading frames will be necessary to definitively determine the contribution of low-level background readthrough to the activity of
W1282X
CFTR.
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237
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:237:244
status:
NEW
view ABCC7 p.Trp1282* details
To date, the strongest suppressive and corrective effects have been seen in studies completed within the Israeli population (16, 17, 20), which is enriched with patients possessing a limited repertoire of premature stop mutations (particularly
W1282X
CFTR).
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238
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:238:201
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:238:560
status:
NEW
view ABCC7 p.Trp1282* details
At least three interpretations may be responsible for the treatment effects seen in these studies relative to others in patients with CF, including (1) enhancement of truncated but functionally active
W1282X
CFTR expression through inhibition of mRNA degradation by aminoglycoside-induced suppression of nonsense-mediated decay; (2) inherent, CFTR-independent population differences influencing CFTR mRNA stability among different study populations; or (3) differences in the relative suppressibility of Israeli subjects (particularly those subjects harboring
W1282X
CFTR).
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239
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:239:27
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:239:92
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:239:38
status:
NEW
view ABCC7 p.Arg1162* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:239:150
status:
NEW
view ABCC7 p.Arg1162* details
For example, although both
W1282X
and
R1162X
CFTR are caused by an abnormal UGA stop codon,
W1282X
is flanked by an adenine (as opposed to guanine in
R1162X
), a factor that enhances susceptibility to translational readthrough (8).
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240
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:240:69
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:240:58
status:
NEW
view ABCC7 p.Arg1162* details
Regardless of the contributor(s), the differences between
R1162X
and
W1282X
CFTR activity after enhancement of expression should be considered when interpreting the results of related clinical trials designed to restore CFTR function through suppression of premature stop mutations.
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241
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:241:55
status:
NEW
view ABCC7 p.Trp1282* details
ABCC7 p.Arg1162*
X
ABCC7 p.Arg1162* 17541014:241:149
status:
NEW
view ABCC7 p.Arg1162* details
In summary, the results reported here demonstrate that
W1282X
CFTR function can be partially restored after enhancement of transcription relative to
R1162X
CFTR.
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243
ABCC7 p.Trp1282*
X
ABCC7 p.Trp1282* 17541014:243:20
status:
NEW
view ABCC7 p.Trp1282* details
The results suggest
W1282X
may be more susceptible to corrective therapies than other mutations, and should be considered in the interpretation of clinical trials examining agents to suppress premature stop codons as a treatment strategy for genetic diseases.
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