ABCC7 p.Pro759Ala
Predicted by SNAP2: | A: N (72%), C: N (66%), D: N (66%), E: N (82%), F: D (53%), G: N (57%), H: N (82%), I: N (66%), K: N (82%), L: N (61%), M: N (78%), N: N (82%), Q: N (87%), R: N (72%), S: N (78%), T: N (82%), V: N (72%), W: D (71%), Y: N (61%), |
Predicted by PROVEAN: | A: N, C: N, D: N, E: N, F: D, G: N, H: N, I: N, K: N, L: N, M: N, N: N, Q: N, R: N, S: N, T: N, V: N, W: D, Y: N, |
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[hide] Biochemical implications of sequence comparisons o... Arch Biochem Biophys. 2002 May 15;401(2):215-22. Tan AL, Ong SA, Venkatesh B
Biochemical implications of sequence comparisons of the cystic fibrosis transmembrane conductance regulator.
Arch Biochem Biophys. 2002 May 15;401(2):215-22., [PMID:12054472]
Abstract [show]
The cystic fibrosis transmembrane conductance regulator (CFTR) is a chloride channel that is both of medical significance in humans and of interest with regard to osmoregulation in aquatic organisms. CFTR is composed of five domains: two membrane-spanning domains, two nucleotide-binding domains, and a regulatory domain. Notwithstanding the plethora of information concerning the structure and function of CFTR, the biochemistry of many facets of CFTR are not completely understood. In this regard, we have performed a sequence alignment of representative vertebrate CFTR with the aim of generating hypotheses on the functional significance of conserved and variable residues. Postulates on function common to all organisms are: (i) Thr338 in the sixth transmembrane segment could have a function related to that of the pore-lining residue Lys335, and it is possible that Thr338 hydrogen bonds to Lys335, thus indirectly affecting anion permeability; (ii) the fragment (111)PDNKE could be an ion sensor; (iii) motifs in the two nucleotide-binding domains reflect differential ATP binding and hydrolysis; and (iv) an interaction in the R domain involving (765)RRQSVL and the C terminal end of the domain results in an inhibitory conformation. Major adaptations in fishes include variations in the postulated ion sensor (111)PDNKE, and the absence of a proline residue in the R domain with consequent higher chloride efflux.
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No. Sentence Comment
167 The mutation P759A results in a longer mean pore open lifetime and a higher chloride efflux [40].
X
ABCC7 p.Pro759Ala 12054472:167:13
status: NEW169 We also note that Pro759 is adjacent to the region 760-783 and perhaps contributes to the proposed inhibitory conformation in mammals and amphibians; this is corroborated by observation on the effect of P759A.
X
ABCC7 p.Pro759Ala 12054472:169:203
status: NEW[hide] Conformation, independent of charge, in the R doma... Biophys J. 2000 Mar;78(3):1293-305. Xie J, Zhao J, Davis PB, Ma J
Conformation, independent of charge, in the R domain affects cystic fibrosis transmembrane conductance regulator channel openings.
Biophys J. 2000 Mar;78(3):1293-305., [PMID:10692317]
Abstract [show]
The R domain of cystic fibrosis transmembrane conductance regulator (CFTR), when phosphorylated, undergoes conformational change, and the chloride channel opens. We investigated the contribution of R domain conformation, apart from the changes induced by phosphorylation, to channel opening, by testing the effect of the peptidyl-prolyl isomerase, cyclophilin A, on the CFTR channel. When it was applied after the channel had been opened by PKA phosphorylation, cyclophilin A increased the open probability of wild-type CFTR (from P(o) = 0.197 +/- 0.010 to P(o) = 0.436 +/- 0. 029) by increasing the number of channel openings, not open time. Three highly conserved proline residues in the R domain, at positions 740, 750, and 759, were considered as candidate targets for cyclophilin A. Mutations of these prolines to alanines (P3A mutant) resulted in a channel unresponsive to cyclophilin A but with pore properties similar to the wild type, under strict control of PKA and ATP, but with significantly increased open probability (P(o) = 0.577 +/- 0.090) compared to wild-type CFTR, again due to an increase in the number of channel openings and not open time. Mutation of each of the proline residues separately and in pairs demonstrated that all three proline mutations are required for maximal P(o). When P3A was expressed in 293 HEK cells and tested by SPQ assay, chloride efflux was significantly increased compared to cells transfected with wild-type CFTR. Thus, treatments favoring the trans-peptidyl conformation about conserved proline residues in the R domain of CFTR affect openings of CFTR, above and beyond the effect of PKA phosphorylation.
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No. Sentence Comment
33 Site-specific mutations were constructed following the manufacturer`s instructions using the following three mutagenesis oligonucleotides (showed 5Ј to 3Ј, with mutated base underlined): P740A, G CTC AGA ATC TGC TAC TAA GGA CAG C (RsaI enzyme restriction site is destroyed); P750A, G GCT GAT GCG AGC CAG TAT CGC CTC (BsrI site is created); P759A/T757S, C CTG AAG CGT GGC CGG AGA GCT GAT (BsaHI site is created and BsrI site is destroyed).
X
ABCC7 p.Pro759Ala 10692317:33:352
status: NEW38 Data presented in this paper for mutants containing P759A mutation are for constructs that also contain the unexpected T757S mutation.
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ABCC7 p.Pro759Ala 10692317:38:52
status: NEW57 Vesicle preparation Six 75 cm2 flasks of 293 HEK cells transfected with either pCEP4(WT) or CFTR mutants (P3A, P2A, P740A, P750A, P759A) vectors were harvested and lysed following the procedure described previously (Xie et al., 1995, 1996).
X
ABCC7 p.Pro759Ala 10692317:57:130
status: NEW64 In experiments with WT, P3A, P2A, P740A, P750, and P759A, cis solution also contains 50 units/ml cAMP-dependent protein kinase A catalytic subunit.
X
ABCC7 p.Pro759Ala 10692317:64:51
status: NEW147 All three proline mutations are involved in the enhanced activity of the P3A CFTR channel To investigate which proline is critical for the increased open probability of the P3A channel, we constructed all three single proline mutants (P740A, P750A, P759A) and incorporated each of them into the planar lipid bilayer.
X
ABCC7 p.Pro759Ala 10692317:147:249
status: NEW149 Mutants P740A and P759A CFTR have similar open probability to WT CFTR, whereas P750A CFTR has significantly increased Po.
X
ABCC7 p.Pro759Ala 10692317:149:18
status: NEW164 P759A CFTR shows no increase in open probability compared to the wild type, but its mean open life time is significantly longer than that of the wild-type CFTR.
X
ABCC7 p.Pro759Ala 10692317:164:0
status: NEW165 To test whether mutation of prolines 750 and 759, but not proline 740, would have even higher Po than P3A by combining the increased channel opening of P750A with the increased open life time of P759A, the double proline mutant P2A CFTR (P750A/P759A) was made.
X
ABCC7 p.Pro759Ala 10692317:165:0
status: NEWX
ABCC7 p.Pro759Ala 10692317:165:195
status: NEWX
ABCC7 p.Pro759Ala 10692317:165:244
status: NEW167 P2A has an increased mean open life time, like the P759A mutant, but its Po is not significant higher than wild-type CFTR (p ϭ 0.46).
X
ABCC7 p.Pro759Ala 10692317:167:51
status: NEW196 The double (P2A; Fig. 10, lane 4) or single proline mutants (P740A, P750A, P759A; Fig. 10, lanes 5-7, respectively) were also fully glycosylated to a similar extent.
X
ABCC7 p.Pro759Ala 10692317:196:75
status: NEW204 (B) Representative single channel currents through a double proline mutant (P2A: P750A/P759A) are plotted.
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ABCC7 p.Pro759Ala 10692317:204:87
status: NEW229 The averaged values were Po ϭ 0.204 Ϯ 0.036 (WT), 0.438 Ϯ 0.029 (WT ϩ CyP (Cyclophilin A)), 0.577 Ϯ 0.090 (P3A CFTR), 0.161 Ϯ 0.018 (P740A), 0.426 Ϯ 0.030 (P750A), 0.166 Ϯ 0.034 (P759A), 0.272 Ϯ 0.059 (P2A), respectively.
X
ABCC7 p.Pro759Ala 10692317:229:227
status: NEW237 It is also FIGURE 10 Heterologous expression of wild-type CFTR and proline mutants in 293 HEK cells: 293 HEK cells transfected with pCEP4(WT), pCEP4(P3A), pCEP4(P2A), pCEP4(P740A), pCEP4(P750A), or pCEP4(P759A) were immunoprecipitated and blotted as described in the Materials and Methods; mAb24-1 that recognizes the C-terminus of CFTR was used in the immunoprecipitation/Western blot.
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ABCC7 p.Pro759Ala 10692317:237:204
status: NEW239 Lane 1 (UNT): untransfected 293 HEK cells; lane 2: WT CFTR expressing cells; lanes 3-7: P3A, P2A, P740A, P750A, and P759A CFTR expressing cells, respectively.
X
ABCC7 p.Pro759Ala 10692317:239:116
status: NEWX
ABCC7 p.Pro759Ala 10692317:239:204
status: NEW34 Site-specific mutations were constructed following the manufacturer`s instructions using the following three mutagenesis oligonucleotides (showed 5b18; to 3b18;, with mutated base underlined): P740A, G CTC AGA ATC TGC TAC TAA GGA CAG C (RsaI enzyme restriction site is destroyed); P750A, G GCT GAT GCG AGC CAG TAT CGC CTC (BsrI site is created); P759A/T757S, C CTG AAG CGT GGC CGG AGA GCT GAT (BsaHI site is created and BsrI site is destroyed).
X
ABCC7 p.Pro759Ala 10692317:34:352
status: NEW39 Data presented in this paper for mutants containing P759A mutation are for constructs that also contain the unexpected T757S mutation.
X
ABCC7 p.Pro759Ala 10692317:39:52
status: NEW58 Vesicle preparation Six 75 cm2 flasks of 293 HEK cells transfected with either pCEP4(WT) or CFTR mutants (P3A, P2A, P740A, P750A, P759A) vectors were harvested and lysed following the procedure described previously (Xie et al., 1995, 1996).
X
ABCC7 p.Pro759Ala 10692317:58:130
status: NEW65 In experiments with WT, P3A, P2A, P740A, P750, and P759A, cis solution also contains 50 units/ml cAMP-dependent protein kinase A catalytic subunit.
X
ABCC7 p.Pro759Ala 10692317:65:51
status: NEW148 All three proline mutations are involved in the enhanced activity of the P3A CFTR channel To investigate which proline is critical for the increased open probability of the P3A channel, we constructed all three single proline mutants (P740A, P750A, P759A) and incorporated each of them into the planar lipid bilayer.
X
ABCC7 p.Pro759Ala 10692317:148:249
status: NEW150 Mutants P740A and P759A CFTR have similar open probability to WT CFTR, whereas P750A CFTR has significantly increased Po.
X
ABCC7 p.Pro759Ala 10692317:150:18
status: NEW166 To test whether mutation of prolines 750 and 759, but not proline 740, would have even higher Po than P3A by combining the increased channel opening of P750A with the increased open life time of P759A, the double proline mutant P2A CFTR (P750A/P759A) was made.
X
ABCC7 p.Pro759Ala 10692317:166:195
status: NEWX
ABCC7 p.Pro759Ala 10692317:166:244
status: NEW168 P2A has an increased mean open life time, like the P759A mutant, but its Po is not significant higher than wild-type CFTR (p afd; 0.46).
X
ABCC7 p.Pro759Ala 10692317:168:51
status: NEW198 The double (P2A; Fig. 10, lane 4) or single proline mutants (P740A, P750A, P759A; Fig. 10, lanes 5-7, respectively) were also fully glycosylated to a similar extent.
X
ABCC7 p.Pro759Ala 10692317:198:75
status: NEW206 (B) Representative single channel currents through a double proline mutant (P2A: P750A/P759A) are plotted.
X
ABCC7 p.Pro759Ala 10692317:206:87
status: NEW231 The averaged values were Po afd; 0.204 afe; 0.036 (WT), 0.438 afe; 0.029 (WT af9; CyP (Cyclophilin A)), 0.577 afe; 0.090 (P3A CFTR), 0.161 afe; 0.018 (P740A), 0.426 afe; 0.030 (P750A), 0.166 afe; 0.034 (P759A), 0.272 afe; 0.059 (P2A), respectively.
X
ABCC7 p.Pro759Ala 10692317:231:227
status: NEW241 Lane 1 (UNT): untransfected 293 HEK cells; lane 2: WT CFTR expressing cells; lanes 3-7: P3A, P2A, P740A, P750A, and P759A CFTR expressing cells, respectively.
X
ABCC7 p.Pro759Ala 10692317:241:116
status: NEW