ABCC7 p.Val232Glu
ClinVar: |
c.695T>A
,
p.Val232Asp
?
, not provided
|
CF databases: |
c.695T>A
,
p.Val232Asp
(CFTR1)
D
, This mutation was was detected by DGGE and identified by direct sequencing in the CFTR gene. The defect is a T to A change at nucleotide 827 in exon 6a which would lead to a valine-to-aspartic acid replacement in the protein sequence at residue 232. This nucleotide change has been found in an infertile man with CBAVD having neither manifestation of gastrointestinal nor pulmonary disease but with a sweat teat at mmol/
|
Predicted by SNAP2: | A: N (53%), C: N (61%), D: D (80%), E: D (71%), F: N (61%), G: D (75%), H: D (75%), I: N (97%), K: D (80%), L: N (93%), M: N (82%), N: D (71%), P: D (75%), Q: D (71%), R: D (80%), S: D (66%), T: D (63%), W: D (85%), Y: D (80%), |
Predicted by PROVEAN: | A: N, C: D, D: D, E: D, F: N, G: D, H: D, I: N, K: D, L: N, M: N, N: D, P: D, Q: D, R: D, S: D, T: N, W: D, Y: N, |
[switch to compact view]
Comments [show]
None has been submitted yet.
[hide] Positional dependence of non-native polar mutation... Biochim Biophys Acta. 2008 Jan;1778(1):79-87. Epub 2007 Sep 15. Wehbi H, Gasmi-Seabrook G, Choi MY, Deber CM
Positional dependence of non-native polar mutations on folding of CFTR helical hairpins.
Biochim Biophys Acta. 2008 Jan;1778(1):79-87. Epub 2007 Sep 15., [PMID:17949679]
Abstract [show]
Mutations of the cystic fibrosis transmembrane conductance regulator (CFTR) cause CF disease by altering the biosynthesis, maturation, folding and ion conductance of this protein. Our laboratory has focused on expression and structural analysis of the CFTR transmembrane (TM) domains using two-TM segments (i.e., helix-loop-helix constructs) which we term 'helical hairpins'; these represent the minimal model of tertiary contacts between two helices in a membrane. Previous studies on a library of TM3/4 hairpins of the first CFTR TM domain suggested that introduction of non-native polar residues into TM4 can compromise CFTR function through side chain-side chain H-bonding interactions with native Q207 in TM3 [Choi, M. Y., Cardarelli, L., Therien, A. G., and Deber, C. M. Non-native interhelical hydrogen bonds in the cystic fibrosis transmembrane conductance regulator domain modulated by polar mutations, Biochemistry 43 (2004) 8077-8083]. In the present work, we combine gel shift assays with a series of NMR experiments for comparative structural characterization of the wild type TM3/4 hairpin and its mutants V232D, I231D, Q207N/V232E. Over 95% of the backbone resonances of a 15N,13C-labelled V232D-TM3/4 construct in the membrane-mimetic environment of perfluorooctanoate (PFO) micelles were successfully assigned, and the presence and boundaries of helical segments within TM3 and TM4 were defined under these conditions. Comparative analysis of 15N and 1H chemical shift variations among HSQC spectra of WT-, V232D-, I231D- and Q207N/V232E-TM3/4 indicated that hairpin conformations vary with the position of a polar mutation (i.e., V232D and I231D vs. WT), but remain similar when hairpins with identically-positioned polar partners are compared (i.e., V232D vs. Q207N-V232E). The overall findings suggest that a polar mutation in a TM helix can potentially distort native interfacial packing determinants in membrane proteins such as CFTR, with consequences that may lead to disease.
Comments [show]
None has been submitted yet.
No. Sentence Comment
3 In the present work, we combine gel shift assays with a series of NMR experiments for comparative structural characterization of the wild type TM3/4 hairpin and its mutants V232D, I231D, Q207N/V232E.
X
ABCC7 p.Val232Glu 17949679:3:193
status: NEW4 Over 95% of the backbone resonances of a 15 N,13 C-labelled V232D-TM3/4 construct in the membrane-mimetic environment of perfluorooctanoate (PFO) micelles were successfully assigned, and the presence and boundaries of helical segments within TM3 and TM4 were defined under these conditions.
X
ABCC7 p.Val232Glu 17949679:4:193
status: NEW5 Comparative analysis of 15 N and 1 H chemical shift variations among HSQC spectra of WT-, V232D-, I231D- and Q207N/V232E-TM3/4 indicated that hairpin conformations vary with the position of a polar mutation (i.e., V232D and I231D vs. WT), but remain similar when hairpins with identically-positioned polar partners are compared (i.e., V232D vs. Q207N-V232E).
X
ABCC7 p.Val232Glu 17949679:5:115
status: NEWX
ABCC7 p.Val232Glu 17949679:5:351
status: NEW13 CF is inherited in a recessive autosomal fashion; most CF patients have a CFTR Available online at www.sciencedirect.com Biochimica et Biophysica Acta 1778 (2008) 79-87 www.elsevier.com/locate/bbamem Abbreviations: CF, Cystic fibrosis; CFTR, Cystic fibrosis transmembrane conductance regulator; TM, Transmembrane; TMD, Transmembrane domain; TM3/4, Helical hairpin including residues 194-241 of CFTR; WT, Wild type; V232D-TM3/4, TM3/4 construct with mutation of Val to Asp at position 232; I231D-TM3/4, TM3/4 construct with mutation of Ile to Asp at position 231; Q207N/V232E-TM3/4, TM3/4 construct with mutation of Gln to Asn at position 207 and Val to Glu at position 232; PFO, Perfluorooctanoate; DPC, Dodecylphosphocholine; SDS, Sodium dodecylsulfate; CD, Circular dichroism; H-bond, Hydrogen bond; HSQC, Heteronuclear single quantum coherence ⁎ Corresponding author.
X
ABCC7 p.Val232Glu 17949679:13:569
status: NEWX
ABCC7 p.Val232Glu 17949679:13:646
status: NEW43 We then use solution NMR experiments to demonstrate the conformational variability of TM3/4 hairpin mutants (including the CF-phenotypic mutant V232D; I231D; and Q207N/V232E) vs. the wild type hairpin in micellar environments.
X
ABCC7 p.Val232Glu 17949679:43:168
status: NEW46 Expression and purification of wild type and mutant TM3/4 constructs from the CFTR membrane domain The 15 N and 15 N/13 C enriched forms of the TM3/4 helical hairpin constructs (WT-, V232D-, I231D-, Q207N/V232E) were expressed and purified as previously described [19].
X
ABCC7 p.Val232Glu 17949679:46:205
status: NEW94 Here, the double mutant Q207N/V232E migrates significantly faster than wild type, indicating that the N/E pair is likely involved in side chain-side chain interactions analogously to the Q/D pair at the corresponding positions in the TM3/4-V232D single mutant [22].
X
ABCC7 p.Val232Glu 17949679:94:30
status: NEW95 In contrast, replacement of wild type Q237 in TM4 with the non-polar Leu residue (mutant Q237L) creates a slower migrating hairpin vs. wild type (Fig. 1a), suggesting that some pre-existing inter-helical interactions - conceivably attributable to a network of H-bonding interactions - have been removed.
X
ABCC7 p.Val232Glu 17949679:95:30
status: NEW123 (a) Relative migration rates of wild type CFTR TM3/4 and mutants Q237L and Q207N-V232E.
X
ABCC7 p.Val232Glu 17949679:123:81
status: NEW127 Note that the vertical axis is given as "% apparent MW decrease" such that the actual band appearance of all these mutants on gels is similar to Q207N-V232E in (A), i.e., faster migration than wild type.
X
ABCC7 p.Val232Glu 17949679:127:151
status: NEW141 (a) WT; (b) V232D; (c) I231D; and (d) Q207N/V232E.
X
ABCC7 p.Val232Glu 17949679:141:44
status: NEW142 Spectra were recorded in 115 mM PFO at 45 °C. Gly cross-peaks (shown in (b)) were assigned from the V232D spectrum (Fig. 2); other assignments shown were made where possible by comparison.
X
ABCC7 p.Val232Glu 17949679:142:44
status: NEW153 We then examined the double mutant Q207N/V232E-TM3/4 in which the potential polar partners are located in the sequence at the same positions as in V232D-TM3/4 (Q207 in TM3 and D232 in TM4).
X
ABCC7 p.Val232Glu 17949679:153:41
status: NEW154 This mutant similarly migrates faster than V232D-TM3/4 (Fig. 1a, b).
X
ABCC7 p.Val232Glu 17949679:154:41
status: NEW155 As shown in Fig. 4b and d, a striking similarity was observed between the 1 H-15 N HSQC 'Gly box` spectra of V232D- and Q207N/V232E-TM3/4, suggesting that the cross-peaks of their Gly residues can be correspondingly assigned, and that their global conformations likely correspond closely.
X
ABCC7 p.Val232Glu 17949679:155:126
status: NEW161 In the present work, Q207N/V232E-TM3/4 migrates faster than TM3/4-V232D (Fig. 1b) although they each have one added negative charge vs. WT.
X
ABCC7 p.Val232Glu 17949679:161:27
status: NEW195 In contrast, the full 1 H-15 N HSQC spectra for V232D- and Q207N/V232E-TM3/4 exhibit striking similarities (not shown, but exemplified by the 'Gly box` comparison between Fig. 4 b and d), suggesting that these two mutants adopt similar conformations in the PFO micelle environment.
X
ABCC7 p.Val232Glu 17949679:195:65
status: NEW196 The 1 H-15 N HSQC spectrum of this double mutant shows that similar to V232D-TM3/4 and I231D-TM3/4 mutants, the residues in TM4 along with some in TM3 and the turn are all highly affected vs. WT upon these mutations.
X
ABCC7 p.Val232Glu 17949679:196:65
status: NEW200 Although the NMR data reported here do not provide specific evidence for H-bond formation nor are sufficient for detailed structural characterization, one can speculate that the similarities in spectra of V232D and Q207N/V232E are the result of contacts between similar residues in the V232D mutant that can effectively be substituted by N207 and E232.
X
ABCC7 p.Val232Glu 17949679:200:221
status: NEW202 Conversely, this model would predict that in the case of I231D, there must be a relative reorientation by 100° of one helix with respect to the other for participation of I231D in interhelical interactions vs. either V232D or Q207N/V232E.
X
ABCC7 p.Val232Glu 17949679:202:237
status: NEW208 Conclusion Features of the secondary structure of mutant V232D-TM3/4 helical hairpins of CFTR, along with comparisons to the WT and mutants I2231D and Q207N/V232E, have been determined using high resolution NMR spectroscopy.
X
ABCC7 p.Val232Glu 17949679:208:157
status: NEW209 Although hairpin constructs have degrees of conformational freedom in SDS or PFO micellar environments that would not be available to the corresponding helices embedded in an intact CFTR TM domain, our results suggest that hairpin interfaces - and possibly helix boundaries - may vary as a function of the position of a non-native polar mutation (i.e., V232D vs. I231D in TM4), and thereby indicate the susceptibility of the native protein structure to a corresponding destiny.
X
ABCC7 p.Val232Glu 17949679:209:157
status: NEW6 Comparative analysis of 15 N and 1 H chemical shift variations among HSQC spectra of WT-, V232D-, I231D- and Q207N/V232E-TM3/4 indicated that hairpin conformations vary with the position of a polar mutation (i.e., V232D and I231D vs. WT), but remain similar when hairpins with identically-positioned polar partners are compared (i.e., V232D vs. Q207N-V232E).
X
ABCC7 p.Val232Glu 17949679:6:115
status: NEWX
ABCC7 p.Val232Glu 17949679:6:351
status: NEW14 CF is inherited in a recessive autosomal fashion; most CF patients have a CFTR Available online at www.sciencedirect.com Biochimica et Biophysica Acta 1778 (2008) 79-87 www.elsevier.com/locate/bbamem Abbreviations: CF, Cystic fibrosis; CFTR, Cystic fibrosis transmembrane conductance regulator; TM, Transmembrane; TMD, Transmembrane domain; TM3/4, Helical hairpin including residues 194-241 of CFTR; WT, Wild type; V232D-TM3/4, TM3/4 construct with mutation of Val to Asp at position 232; I231D-TM3/4, TM3/4 construct with mutation of Ile to Asp at position 231; Q207N/V232E-TM3/4, TM3/4 construct with mutation of Gln to Asn at position 207 and Val to Glu at position 232; PFO, Perfluorooctanoate; DPC, Dodecylphosphocholine; SDS, Sodium dodecylsulfate; CD, Circular dichroism; H-bond, Hydrogen bond; HSQC, Heteronuclear single quantum coherence Ìe; Corresponding author.
X
ABCC7 p.Val232Glu 17949679:14:569
status: NEWX
ABCC7 p.Val232Glu 17949679:14:646
status: NEW44 We then use solution NMR experiments to demonstrate the conformational variability of TM3/4 hairpin mutants (including the CF-phenotypic mutant V232D; I231D; and Q207N/V232E) vs. the wild type hairpin in micellar environments.
X
ABCC7 p.Val232Glu 17949679:44:168
status: NEW47 Expression and purification of wild type and mutant TM3/4 constructs from the CFTR membrane domain The 15 N and 15 N/13 C enriched forms of the TM3/4 helical hairpin constructs (WT-, V232D-, I231D-, Q207N/V232E) were expressed and purified as previously described [19].
X
ABCC7 p.Val232Glu 17949679:47:205
status: NEW124 (a) Relative migration rates of wild type CFTR TM3/4 and mutants Q237L and Q207N-V232E.
X
ABCC7 p.Val232Glu 17949679:124:81
status: NEW128 Note that the vertical axis is given as "% apparent MW decrease" such that the actual band appearance of all these mutants on gels is similar to Q207N-V232E in (A), i.e., faster migration than wild type.
X
ABCC7 p.Val232Glu 17949679:128:151
status: NEW156 As shown in Fig. 4b and d, a striking similarity was observed between the 1 H-15 N HSQC 'Gly box` spectra of V232D- and Q207N/V232E-TM3/4, suggesting that the cross-peaks of their Gly residues can be correspondingly assigned, and that their global conformations likely correspond closely.
X
ABCC7 p.Val232Glu 17949679:156:126
status: NEW162 In the present work, Q207N/V232E-TM3/4 migrates faster than TM3/4-V232D (Fig. 1b) although they each have one added negative charge vs. WT.
X
ABCC7 p.Val232Glu 17949679:162:27
status: NEW201 Although the NMR data reported here do not provide specific evidence for H-bond formation nor are sufficient for detailed structural characterization, one can speculate that the similarities in spectra of V232D and Q207N/V232E are the result of contacts between similar residues in the V232D mutant that can effectively be substituted by N207 and E232.
X
ABCC7 p.Val232Glu 17949679:201:221
status: NEW203 Conversely, this model would predict that in the case of I231D, there must be a relative reorientation by 100&#b0; of one helix with respect to the other for participation of I231D in interhelical interactions vs. either V232D or Q207N/V232E.
X
ABCC7 p.Val232Glu 17949679:203:236
status: NEW[hide] The cystic fibrosis V232D mutation inhibits CFTR m... Biochem Pharmacol. 2014 Mar 1;88(1):46-57. doi: 10.1016/j.bcp.2013.12.027. Epub 2014 Jan 9. Loo TW, Clarke DM
The cystic fibrosis V232D mutation inhibits CFTR maturation by disrupting a hydrophobic pocket rather than formation of aberrant interhelical hydrogen bonds.
Biochem Pharmacol. 2014 Mar 1;88(1):46-57. doi: 10.1016/j.bcp.2013.12.027. Epub 2014 Jan 9., [PMID:24412276]
Abstract [show]
Processing mutations that inhibit folding and trafficking of CFTR are the main cause of cystic fibrosis. Repair of CFTR mutants requires an understanding of the mechanisms of misfolding caused by processing mutations. Previous studies on helix-loop-helix fragments of the V232D processing mutation suggested that its mechanism was to lock transmembrane (TM) segments 3 and 4 together by a non-native hydrogen bond (Asp232(TM4)/Gln207(TM3)). Here, we performed mutational analysis to test for Asp232/Gln207 interactions in full-length CFTR. The rationale was that a V232N mutation should mimic V232D and a V232D/Q207A mutant should mature if the processing defect was caused by hydrogen bonds. We report that only Val232 mutations to charged amino acids severely blocked CFTR maturation. The V232N mutation did not mimic V232D as V232N showed 40% maturation compared to 2% for V232D. Mutation of Val232 to large nonpolar residues (Leu, Phe) had little effect. The Q207L mutation did not rescue V232D because Q207L showed about 50% maturation in the presence of corrector VX-809 while V232D/Q207A could no longer be rescued. These results suggest that V232D inhibits maturation by disrupting a hydrophobic pocket between TM segments rather than forming a non-native hydrogen bond. Disulfide cross-linking analysis of cysteines W356C(TM6) and W1145C(TM12) suggest that the V232D mutation inhibits maturation by trapping CFTR as a partially folded intermediate. Since correctors can efficiently rescue V232D CFTR, the results suggest that hydrophilic processing mutations facing a hydrophobic pocket are good candidates for rescue with pharmacological chaperones.
Comments [show]
None has been submitted yet.
No. Sentence Comment
129 Mutant V232E was also made because aspartic acid and glutamic acid have similar side chains.
X
ABCC7 p.Val232Glu 24412276:129:7
status: NEW130 The mutants were expressed in HEK 293 cells and whole cell extracts subjected to immunoblot analysis. Fig. 3A and B shows that the expression of mutant V232E resembled that of V232D as it significantly inhibited maturation by about 40-fold (about 2% of the CFTR protein was present as the mature protein when compared to 80% for wild-type CFTR (Fig. 3)).
X
ABCC7 p.Val232Glu 24412276:130:152
status: NEW131 By contrast, the amount of mature protein was about 20-fold higher (about 40%) for mutants V232N and V232Q compared to V232D or V232E (Fig. 3).
X
ABCC7 p.Val232Glu 24412276:131:128
status: NEW132 These results suggested that charge rather than non-native hydrogen bonds might be responsible for the severe reduction in CFTR maturation caused by the V232D or V232E mutations.
X
ABCC7 p.Val232Glu 24412276:132:162
status: NEW160 We tested if mutations to Val232 that severely inhibited maturation (V232E, V232K, or V232R) could be rescued with other correctors predicted to act as pharmacological chaperones such as 4a [33], VX-809 [19], 2b [35], 5a [12], or VX-325 [36].
X
ABCC7 p.Val232Glu 24412276:160:69
status: NEW163 Mutant V232E was rescued with all the correctors (35-70% mature product) (Fig. 4A and D).
X
ABCC7 p.Val232Glu 24412276:163:7
status: NEW171 Accordingly, we introduced the V510D suppressor mutation into mutants V232E, V232K, or V232R.
X
ABCC7 p.Val232Glu 24412276:171:70
status: NEW173 The V510D was particularly effective in promoting maturation of V232E in the absence of VX-809 as the level of mature protein increased from less than 5% (Fig. 4A) to about 35% in mutant V510D/V232E (Fig. 5A and B).
X
ABCC7 p.Val232Glu 24412276:173:64
status: NEWX
ABCC7 p.Val232Glu 24412276:173:193
status: NEW174 Expression of V510D/V232E in the presence of VX-809 yielded about 70% mature protein.
X
ABCC7 p.Val232Glu 24412276:174:20
status: NEW177 The relative maturation levels achieved using correctors or the V510D suppressor show that the V232E mutation could be more efficiently rescued than the V232K or V232R mutations.
X
ABCC7 p.Val232Glu 24412276:177:95
status: NEW178 The properties of the V232E mutant are likely to be very similar to the V232D mutant as the V510D suppressor mutation [19] could also rescue the V232D mutant.
X
ABCC7 p.Val232Glu 24412276:178:22
status: NEW188 Fig. 4. Rescue of V232E, V232K, and V232R mutants with correctors.
X
ABCC7 p.Val232Glu 24412276:188:18
status: NEW189 Whole cell extracts of cells expressing mutants V232E (A), V232K (B), or V232R (C) in the absence (none) or presence of various correctors were subjected to immunoblot analysis.
X
ABCC7 p.Val232Glu 24412276:189:48
status: NEW195 The L305R(TM5) P-gp mutant resembles CFTR mutants V232D, V232E, and V232K The characteristics of the V232D/Q207X (Fig. 1) and V232X (Fig. 3) mutants suggest that the mechanism of the V232D mutation involves disruption of a hydrophobic pocket between TM segments.
X
ABCC7 p.Val232Glu 24412276:195:57
status: NEW204 It appears that the CFTR V232D, V232E, and V232K processing mutationsresemble P-gp mutantsthatcontain acharged residueata hydrophobic interface between adjacent TM segments because they can be efficiently rescued (with VX-809).
X
ABCC7 p.Val232Glu 24412276:204:32
status: NEW222 (A) Whole cell extracts of cells expressing CFTR mutants V232E/V510D, V232K/V510D or V232R/ V510D in the absence () or presence (+) of VX-809 or were subjected to immunoblot analysis.
X
ABCC7 p.Val232Glu 24412276:222:57
status: NEW