ABCA1 p.Asn1889Thr

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PMID: 21444760 [PubMed] Leduc MS et al: "The mouse QTL map helps interpret human genome-wide association studies for HDL cholesterol."
No. Sentence Comment
198 Known HDL gene Abca1 D2xCAST HF M +1.67(<0.001) T251I Polarity No No V343M No No No S658G No No No I691V No No Yes N1889T No No Yes CASTx129 HF M +1.56 (<0.001) PERAxI HF F +1.15 (0.165) S658G No No No PERAxD2 HF F +1.05 (0.542) V1291I No No No E1550K Polarity and charge Yes Yes T1565N No No No Unknown HDL gene Galnt2 B6xCASAa C F -1.27 (0.010) None - - - Wwox B6xCAST C F -1.16 (0.342) V186M No Yes (SIFT) No Cdh13 B6xCAST C F +1.16 (0.052) N56S No No No Y214F Polarity Yes (SIFT) Yes I660M No No Yes HF, high-fat diet; C, chow diet; M, male; F, female. a Bold indicates the high allele strain.
X
ABCA1 p.Asn1889Thr 21444760:198:115
status: NEW
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196 Known HDL gene Abca1 D2xCAST HF M +1.67(<0.001) T251I Polarity No No V343M No No No S658G No No No I691V No No Yes N1889T No No Yes CASTx129 HF M +1.56 (<0.001) PERAxI HF F +1.15 (0.165) S658G No No No PERAxD2 HF F +1.05 (0.542) V1291I No No No E1550K Polarity and charge Yes Yes T1565N No No No Unknown HDL gene Galnt2 B6xCASAa C F -1.27 (0.010) None - - - Wwox B6xCAST C F afa;1.16 (0.342) V186M No Yes (SIFT) No Cdh13 B6xCAST C F +1.16 (0.052) N56S No No No Y214F Polarity Yes (SIFT) Yes I660M No No Yes HF, high-fat diet; C, chow diet; M, male; F, female. a Bold indicates the high allele strain.
X
ABCA1 p.Asn1889Thr 21444760:196:115
status: NEW
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