ABCC7 p.Pro574Ser
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PMID: 18463704
[PubMed]
Serohijos AW et al: "Diminished self-chaperoning activity of the DeltaF508 mutant of CFTR results in protein misfolding."
No.
Sentence
Comment
167
Interestingly, the P574S mutation has been observed in a CF family also possessing the DF508 mutation but without significant pulmonary or pancreatic disease.
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ABCC7 p.Pro574Ser 18463704:167:19
status: NEW169 The mutations P574S and F594N may promote contact formation between Q493 and P574 during NBD1DF508 folding, thus rescuing NBD1DF508 from the misfolding defect.
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ABCC7 p.Pro574Ser 18463704:169:14
status: NEW
PMID: 20059485
[PubMed]
Dorfman R et al: "Do common in silico tools predict the clinical consequences of amino-acid substitutions in the CFTR gene?"
No.
Sentence
Comment
64
Mutations in the CFTR gene grouped by clinical category Cystic fibrosis CFTR-related disease No disease T338I D614G L320V V920L L90S M470V H199R S1251N I203M G550R P111A I148T Q1291H R560K L1388Q L183I R170H I1027T S549R D443Y P499A L1414S T908N R668C S549N A455E E1401K Q151K G27E I1234L Y563N R347P C866R S1118C P1290S R75Q A559T V520F P841R M469V E1401G P67L G85E S50Y E1409K R933G G458V G178R Y1032C R248T I980K G85V V392G L973P L137H T351S R334W I444S V938G R792G R560T R555G L1339F D1305E P574H V1240G T1053I D58G G551D L1335P I918M F994C S945L L558S F1337V R810G D1152H G1247R P574S R766M D579G W1098R H949R F200I R352Q L1077P K1351E M244K L206W M1101K D1154G L375F N1303K R1066C E528D D110Y R347H R1070Q A800G P1021S S549K A1364V V392A damaging` (is supposed to affect protein function or structure) and 'probably damaging` (high confidence of affecting protein function or structure).
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ABCC7 p.Pro574Ser 20059485:64:584
status: NEW
PMID: 21708286
[PubMed]
Fresquet F et al: "Orphan missense mutations in the cystic fibrosis transmembrane conductance regulator a three-step biological approach to establishing a correlation between genotype and phenotype."
No.
Sentence
Comment
50
The genotype was as follows: p.[Asn1303Lys] ϩ [Pro574Ser].
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ABCC7 p.Pro574Ser 21708286:50:53
status: NEW97 Sequences of Site-Directed Mutagenesis Primers Mutation Sense oligonucleotide sequences L102P 5=-GTACAGCCTCTCTTACCGGGAAGAATCATAGCTTCC-3= L167R 5=-AAGAAGACTTTAAAGCGGTCAAGCCGTGTTCTAG-3= P574S 5=-GCTGATTTGTATTTATTAGACTCTTCTTTTGGATACCTAGATG-3= V562I 5=-AGAATTTCTTTAGCAAGAGCAATATACAAAGATGCTGATTTG-3= K696R 5=-CAGACTGGAGAGTTTGGGGAAAGAAGGAAGAATTCTATTCTC-3= P841R 5=-GATATGGAGAGCATACGAGCAGTGACTACATGG-3= CFTR Missense Mutation Biological Assay 3 JMD Month 2011, Vol. xx, No.
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ABCC7 p.Pro574Ser 21708286:97:184
status: NEW109 Mixed Phenotype with P574S CFTR Variant The missense substitution p.[Pro574Ser] (P574S) lies within nucleotide-binding domain 1.
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ABCC7 p.Pro574Ser 21708286:109:21
status: NEWX
ABCC7 p.Pro574Ser 21708286:109:69
status: NEWX
ABCC7 p.Pro574Ser 21708286:109:81
status: NEW112 Moreover, the P574S mutant does not fully colocalize with the ER marker and seems to escape this cellular compartment because a strong green stain can be observed, which clearly differs from the calreticulin red signal.
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ABCC7 p.Pro574Ser 21708286:112:14
status: NEW113 After immunoblotting (Figure 2B), we quantify the ratio of immature core-glycosylated CFTR/total CFTR [band B/(band B ϩ band C)]: attributing 100% to WT-CFTR, this ratio increases to 349.5% Ϯ 88% (n ϭ 3) for P574S.
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ABCC7 p.Pro574Ser 21708286:113:226
status: NEW115 Surprisingly, the iodide efflux assay exhibits a dramatic inhibition of CFTR channel activity: when 100% activation is attributed to the maximal activation peak of WT-CFTR, activation is reduced to 13.07% Ϯ 5.23% (n ϭ 4) for P574S (Figure 2C).
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ABCC7 p.Pro574Ser 21708286:115:237
status: NEW116 The lowered maturation of P574S suggests an attenuated class II mutation.
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ABCC7 p.Pro574Ser 21708286:116:26
status: NEW118 These data should be confronted to the patient genotype to evaluate the pathogenicity of the P574S mutation.
X
ABCC7 p.Pro574Ser 21708286:118:93
status: NEW122 Summary of the Patients` Data, Concerning Genotype, Phenotype, and Protein Dysfunction Patient no./sex/age at molecular diagnostics (years) Genotype Phenotype Protein dysfunctions Channel activity* Maturation† Intracellular localization‡ 1/F/3 p.[Leu102Pro] ϩ [Arg553X] Positive sweat test result, bacterial lung colonization, no pancreatitis ϩϩ ϩϩ ϩϩ 2/F/newborn p.[Phe508del] ϩ [Leu167Arg] Positive sweat test result, recurrent pancreatitis, no lung infection ϩϩ ϩϩ ϩϩ 3/F/3 p.[Asn1303Lys] ϩ [Pro574Ser] Normal sweat test result, asymptomatic ϩϩ ϩ ϩ 4/M/31 p.[Arg74Trp;Val201Met; Asp1270Asn] ϩ [Pro841Arg]; c.
X
ABCC7 p.Pro574Ser 21708286:122:599
status: NEW145 This confirms that V562I substitution should be a polymorphism with no structural or functional impact on the CFTR protein.
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ABCC7 p.Pro574Ser 21708286:145:21
status: NEWX
ABCC7 p.Pro574Ser 21708286:145:68
status: NEWX
ABCC7 p.Pro574Ser 21708286:145:79
status: NEW151 In our model, two missense mutations, L102P and A calreticulin egremP201L calreticulin egremP201L L167R calreticulin mergeL167R calreticulin merge CB F508del L102P L167R WT F508del L102P L167R *** *** ***WT + inh172 L102P L167R *** *** ***WT + inh172 L102P L167R B C CFTR B C CFTR % of maximal activation C.
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ABCC7 p.Pro574Ser 21708286:151:14
status: NEW154 L102P and L167R amino acid substitutions impair CFTR protein maturation.
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ABCC7 p.Pro574Ser 21708286:154:233
status: NEW161 B A calreticulin egremS475P calreticulin egremS475P WT F508del P574S CFTR C WT F508del P574S CFTR C B CFTR NaKATPase B CFTR NaKATPase C WT P574S *** WT P574S ***** 00 WT P574S 0 00 00 00 00 **** 00 WT P574S 0 00 00 00 00 0 50 100 WT % of maximal activation 0 50 100 WT % of maximal activationB/(B+C) (%) 100 0 200 300 400 500 B/(B+C) (%) 100 0 200 300 400 500 Figure 2.
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ABCC7 p.Pro574Ser 21708286:161:63
status: NEWX
ABCC7 p.Pro574Ser 21708286:161:87
status: NEWX
ABCC7 p.Pro574Ser 21708286:161:139
status: NEWX
ABCC7 p.Pro574Ser 21708286:161:152
status: NEWX
ABCC7 p.Pro574Ser 21708286:161:170
status: NEWX
ABCC7 p.Pro574Ser 21708286:161:201
status: NEW162 P574S amino acid substitution decreases CFTR protein maturation.
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ABCC7 p.Pro574Ser 21708286:162:0
status: NEW181 The results obtained for P574S are more complex to interpret.
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ABCC7 p.Pro574Ser 21708286:181:25
status: NEW183 Contrary to L102P and L167R, P574S is not fully retained in the ER compartment because we can see the presence of the fully glycosylated mature form of CFTR by using Western blot analysis.
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ABCC7 p.Pro574Ser 21708286:183:29
status: NEW184 This observation is sustained by confocal microscopic imaging clearly showing different staining patterns for P574S- CFTR and the ER resident calreticulin.
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ABCC7 p.Pro574Ser 21708286:184:110
status: NEW185 Taken together, these results strengthen the idea that a small part of P574S could reach post-Golgi compartments and, thus, the plasma membrane.
X
ABCC7 p.Pro574Ser 21708286:185:71
status: NEW187 His genotype was p.[Asn1303Lys] ϩ [Pro574Ser], and the allele in cis is considered a CF-causing mutation.21 Five sweat test results were negative, and this patient is now a healthy 3-year-old girl, asymptomatic of CF disease.
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ABCC7 p.Pro574Ser 21708286:187:41
status: NEW189 Their genotype was p.[Phe508del] ϩ [Pro574Ser].
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ABCC7 p.Pro574Ser 21708286:189:42
status: NEW190 These data clearly indicate that P574S induces a CF-related disorder phenotype (CBAVD) for males, consistent with a normal sweat test result and no symptoms of CF disease for the girl.
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ABCC7 p.Pro574Ser 21708286:190:33
status: NEW191 However, if the results of our Western blot analysis indicate a mild phenotype, P574S-CFTR-impaired channel activation would suggest a severe CF phenotype.
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ABCC7 p.Pro574Ser 21708286:191:25
status: NEWX
ABCC7 p.Pro574Ser 21708286:191:80
status: NEW193 K696R and P841R amino acid substitutions affect CFTR channel activity.
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ABCC7 p.Pro574Ser 21708286:193:29
status: NEW199 A B C V562I actin mergeV562I actin merge % of maximal activation ns 0 50 100 WT V562I % of maximal activation ns 0 50 100 WT V562I % of maximal activation ns 0 50 100 WT V562I B CFTR NaKATPase C WT F508del V562I B CFTR NaKATPase C WT F508del V562I Figure 4.
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ABCC7 p.Pro574Ser 21708286:199:42
status: NEW200 The V562I amino acid substitution does not alter CFTR phenotype.
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ABCC7 p.Pro574Ser 21708286:200:33
status: NEW207 Obviously, patch-clamp analysis would be useful to measure the real impact of P574S in CFTR channel gating.
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ABCC7 p.Pro574Ser 21708286:207:78
status: NEW224 Our results are concordant with those previously obtained in baby hamster kidney cells overexpressing CFTR23 (by using Western blot analysis, iodide effluxes, and inside-out patch-clamp experiments in which the V562I mutant behaves like WT CFTR).
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ABCC7 p.Pro574Ser 21708286:224:26
status: NEW228 Moreover, it appears that P574S, an allele exhibiting a lower severity for two of three criteria, is not a CF-causing mutation, despite strongly decreased estimated channel activity.
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ABCC7 p.Pro574Ser 21708286:228:26
status: NEW53 The two boys had the same genotype: p.[Phe508del] ϩ [Pro574Ser]); they presented with congenital bilateral aplasia of the vas deferens (CBAVD).
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ABCC7 p.Pro574Ser 21708286:53:59
status: NEW60 Sequences of Site-Directed Mutagenesis Primers Mutation Sense oligonucleotide sequences L102P 5=-GTACAGCCTCTCTTACCGGGAAGAATCATAGCTTCC-3= L167R 5=-AAGAAGACTTTAAAGCGGTCAAGCCGTGTTCTAG-3= P574S 5=-GCTGATTTGTATTTATTAGACTCTTCTTTTGGATACCTAGATG-3= V562I 5=-AGAATTTCTTTAGCAAGAGCAATATACAAAGATGCTGATTTG-3= K696R 5=-CAGACTGGAGAGTTTGGGGAAAGAAGGAAGAATTCTATTCTC-3= P841R 5=-GATATGGAGAGCATACGAGCAGTGACTACATGG-3= was presented.
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ABCC7 p.Pro574Ser 21708286:60:184
status: NEW81 Summary of the Patients` Data, Concerning Genotype, Phenotype, and Protein Dysfunction Patient no./sex/age at molecular diagnostics (years) Genotype Phenotype Protein dysfunctions Channel activity* Maturation† Intracellular localization‡ 1/F/3 p.[Leu102Pro] ϩ [Arg553X] Positive sweat test result, bacterial lung colonization, no pancreatitis ϩϩ ϩϩ ϩϩ 2/F/newborn p.[Phe508del] ϩ [Leu167Arg] Positive sweat test result, recurrent pancreatitis, no lung infection ϩϩ ϩϩ ϩϩ 3/F/3 p.[Asn1303Lys] ϩ [Pro574Ser] Normal sweat test result, asymptomatic ϩϩ ϩ ϩ 4/M/31 p.[Arg74Trp;Val201Met; Asp1270Asn] ϩ [Pro841Arg]; c.
X
ABCC7 p.Pro574Ser 21708286:81:599
status: NEW102 Fluorescence was examined with a spectral confocal station FV-1000 in- B A calreticulin egremS475P calreticulin egremS475P WT F508del P574S CFTR C WT F508del P574S CFTR C B CFTR NaKATPase B CFTR NaKATPase C WT P574S *** WT P574S ***** 00 WT P574S 0 00 00 00 00 **** 00 WT P574S 0 00 00 00 00 0 50 100 WT % of maximal activation 0 50 100 WT % of maximal activationB/(B+C) (%) 100 0 200 300 400 500 B/(B+C) (%) 100 0 200 300 400 500 Figure 2.
X
ABCC7 p.Pro574Ser 21708286:102:134
status: NEWX
ABCC7 p.Pro574Ser 21708286:102:158
status: NEWX
ABCC7 p.Pro574Ser 21708286:102:210
status: NEWX
ABCC7 p.Pro574Ser 21708286:102:223
status: NEWX
ABCC7 p.Pro574Ser 21708286:102:241
status: NEWX
ABCC7 p.Pro574Ser 21708286:102:272
status: NEW103 P574S amino acid substitution decreases CFTR protein maturation.
X
ABCC7 p.Pro574Ser 21708286:103:0
status: NEW152 After immunoblotting (Figure 2B), we quantify the ratio of immature core-glycosylated CFTR/total CFTR [band B/(band B ϩ band C)]: attributing 100% to WT-CFTR, this ratio increases to 349.5% Ϯ 88% (n ϭ 3) for P574S.
X
ABCC7 p.Pro574Ser 21708286:152:226
status: NEW155 The lowered maturation of P574S suggests an attenuated class II mutation.
X
ABCC7 p.Pro574Ser 21708286:155:26
status: NEW157 These data should be compared to the patient genotype to evaluate the pathogenicity of the P574S mutation.
X
ABCC7 p.Pro574Ser 21708286:157:91
status: NEW194 This observation is sustained by confocal microscopic imaging clearly showing different staining patterns for P574S- CFTR and the ER resident calreticulin.
X
ABCC7 p.Pro574Ser 21708286:194:110
status: NEW195 Taken together, these results strengthen the idea that a small part of P574S could reach post-Golgi compartments and, thus, the plasma membrane.
X
ABCC7 p.Pro574Ser 21708286:195:71
status: NEW197 His genotype was p.[Asn1303Lys] ϩ [Pro574Ser], and the allele in cis is considered a CF-causing mutation.21 Five sweat test results were negative, and this patient is now a healthy 3-year-old girl, asymptomatic of CF disease.
X
ABCC7 p.Pro574Ser 21708286:197:41
status: NEW201 However, if the results of our Western blot analysis indicate a mild phenotype, P574S-CFTR-impaired channel activation would suggest a severe CF phenotype.
X
ABCC7 p.Pro574Ser 21708286:201:80
status: NEW203 Obviously, patch-clamp analysis would be useful to measure the real impact of P574S in CFTR channel gating.
X
ABCC7 p.Pro574Ser 21708286:203:78
status: NEW