Variants of ABCC6 located in non-coding regions
Variation |
Location |
Effect |
Review status |
URL |
c.-219A>C |
promoter; see TF sites |
D |
Likely associated to PXE |
PubMed |
c.37-1G>A |
intron 1 |
D |
splice |
LOVD |
c.220-1G>C |
intron 2 |
D |
splice |
LOVD |
c.345+26C>T |
intron 3 |
D |
intronic |
LOVD |
c.346-6G>A |
intron 3 |
D |
possible splice |
LOVD |
c.600+23C>T |
intron 5 |
D |
intronic |
LOVD |
c.662+12C>T |
intron 6 |
D |
intronic |
LOVD |
c.998+2delT |
intron 8 |
D |
splice |
LOVD |
c.998+2_998+3delTG |
intron 8 |
D |
splice |
LOVD |
c.1176+6C>T |
intron 9 |
D |
possible splice |
LOVD |
c.1338+7C>G |
intron 10 |
D |
possible splice |
LOVD |
c.1338+20C>G |
intron 10 |
D |
intronic |
LOVD |
c.1432-22C>A |
intron 11 |
D |
intronic |
LOVD |
c.1868-5T>G |
intron 14 |
D |
possible splice |
LOVD |
c.2070+5G>A |
intron 16 |
D |
splice |
LOVD |
c.2247+22T>G |
intron 17 |
D |
intronic |
LOVD |
c.2248-12_11delTT |
intron 17 |
D |
intronic |
LOVD |
c.2248-2_1delAG |
intron 17 |
D |
splice |
LOVD |
c.2416-2_1delAG |
intron 18 |
D |
splice |
LOVD |
c.2787+1G>T |
intron 21 |
D |
Pathogenic |
ClinVar |
c.2787+1G>T |
intron 21 |
D |
splice |
LOVD |
c.3506+15G>A |
intron 24 |
D |
intronic |
LOVD |
c.3507-16T>C |
intron 24 |
D |
intronic |
LOVD |
c.3507-3C>T |
intron 24 |
D |
splice |
LOVD |
c.3507-1G>A |
intron 24 |
D |
splice |
LOVD |
c.3634-3C>A |
intron 25 |
D |
splice |
LOVD |
c.3736-1G>A |
intron 26 |
D |
Pathogenic |
ClinVar |
c.3736-1G>A |
intron 26 |
D |
splice |
LOVD |
c.3883-24G>A |
intron 27 |
D |
intronic |
LOVD |
c.3883-6G>A |
intron 27 |
D |
possible splice |
LOVD |
c.3883-5G>A |
intron 27 |
D |
possible splice |
LOVD |
c.4208+9G>A |
intron 29 |
D |
intronic |
LOVD |
c.4403+11C>G |
intron 30 |
D |
intronic |
LOVD |
c.*17G>A |
exon 31 |
D |
3' UTR |
LOVD |
c.*38G>A |
exon 31 |
D |
3' UTR |
LOVD |